BetterScholar BetterScholar
10
Role
Title
Level Year L/R
๐Ÿข Training GANs with Optimism
C. Daskalakis, Andrew Ilyas, Vasilis Syrgkanis, Haoyang Zeng
8 2017
8
๐Ÿข
๐Ÿฆ Convolutional neural network architectures for predicting DNAโ€“protein binding
Haoyang Zeng, Matthew D. Edwards, Ge Liu, D. Gifford
8 2016
8
๐Ÿฆ
๐Ÿœ Abundant contribution of short tandem repeats to gene expression variation in humans
11 auth. M. Gymrek, Thomas Willems, A. Guilmatre, Haoyang Zeng, Barak Markus, S. Georgiev, ... M. Daly, A. Price, J. Pritchard, A. Sharp, Yaniv Erlich
8 2015
8
๐Ÿœ
๐Ÿœ Antibody complementarity determining region design using high-capacity machine learning
10 auth. Ge Liu, Haoyang Zeng, Jonas W. Mueller, Brandon Carter, Ziheng Wang, J. Schilz, ... Geraldine Horny, M. Birnbaum, S. Ewert, D. Gifford
7 2019
7
๐Ÿœ
๐Ÿœ Perspectives on ENCODE
501 auth. F. Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal, Bronwen L. Aken, Rizi Ai, J. Akiyama, O. A. Jammal, Henry Amrhein, S. Anderson, Gregory Andrews, I. Antoshechkin, K. Ardlie, J. Armstrong, ... Matthew Astley, Budhaditya Banerjee, Amira A. Barkal, If H. A. Barnes, I. Barozzi, D. Barrell, Gemma Barson, Daniel Bates, Ulugbek K. Baymuradov, C. Bazile, Michael A. Beer, Samantha P. Beik, M. Bender, Ruth Bennett, L. Bouvrette, Bradley E. Bernstein, Andrew E. Berry, A. Bhaskar, A. Bignell, S. Blue, D. Bodine, C. Boix, Nathan Boley, Tyler Borrman, Beatrice Borsari, A. Boyle, Laurel A. Brandsmeier, A. Breschi, E. Bresnick, Jason A. Brooks, Michael Buckley, C. Burge, Rachel Byron, Eileen W. Cahill, Lingling Cai, Lulu Cao, Mark Carty, R. Castanon, Andres Castillo, H. Chaib, Esther T. Chan, Daniel R. Chee, Sora Chee, Huaming Chen, Jia-Yu Chen, Songjie Chen, J. M. Cherry, S. Chhetri, J. Choudhary, Jacqueline Chrast, Dongjun Chung, Declan Clarke, Neal A. L. Cody, Candice J. Coppola, J. Coursen, A. D'Ippolito, S. Dalton, Cassidy Danyko, C. Davidson, J. Dรกvila-Velderrain, Carrie A. Davis, J. Dekker, A. Deran, Gilberto Desalvo, Gloria Despacio-Reyes, Colin N. Dewey, D. Dickel, Morgan Diegel, M. Diekhans, V. Dileep, Bo Ding, S. Djebali, A. Dobin, Daniel Dominguez, S. Donaldson, J. Drenkow, T. Dreszer, Y. Drier, M. Duff, D. Dunn, Catharine L. Eastman, J. Ecker, Matthew D. Edwards, Nicole C. El-Ali, Shaimae I. Elhajjajy, Keri Elkins, A. Emili, C. Epstein, Rachel C. Evans, Iakes Ezkurdia, K. Fan, P. Farnham, Nina P. Farrell, E. Feingold, Anne-Maud Ferreira, Katherine I. Fisher-Aylor, Stephen Fitzgerald, Paul Flicek, Chuan-Sheng Foo, K. Fortier, A. Frankish, Peter Freese, Shaliu Fu, Xiang-Dong Fu, Yu Fu, Yoko Fukuda-Yuzawa, M. Fulciniti, Alister P. W. Funnell, I. Gabdank, Timur Galeev, M. Gao, C. G. Girรณn, Tyler H. Garvin, C. Gelboin-Burkhart, G. Georgolopoulos, M. Gerstein, B. Giardine, D. Gifford, D. Gilbert, Daniel A. Gilchrist, Shawn M. Gillespie, T. Gingeras, Peng Gong, Alvaro J. Gonzรกlez, J. Gonzalez, P. Good, A. Goren, David U. Gorkin, B. Graveley, Michael Gray, J. Greenblatt, Ed Griffiths, M. Groudine, Fabian Grubert, Mengting Gu, R. Guigรณ, Hongbo Guo, Gamze Gursoy, M. Gutierrez-Arcelus, J. Halow, R. Hardison, Matthew Hardy, M. Hariharan, A. Harmanci, Anne N. Harrington, J. Harrow, Tatsunori B. Hashimoto, R. Hasz, Meital Hatan, E. Haugen, J. Hayes, Peng He, Yupeng He, Nastaran Heidari, David Hendrickson, Elisabeth F. Heuston, J. Hilton, B. Hitz, Abigail Hochman, Cory Holgren, Lei Hou, Shuyu Hou, Y. Hsiao, Shan-Chun Hsu, Hui Huang, T. Hubbard, Jack Huey, Timothy R. Hughes, T. Hunt, S. Ibarrientos, Robbyn Issner, M. Iwata, Osagie G. Izuogu, T. Jaakkola, Nader Jameel, Camden Jansen, Lixia Jiang, Peng Jiang, Audra K. Johnson, Rory Johnson, Irwin Jungreis, Madhura Kadaba, Maya Kasowski, M. Kasparian, Momoe Kato, R. Kaul, T. Kawli, M. Kay, Judy C. Keen, S. KeleลŸ, C. Keller, D. Kelley, Manolis Kellis, Pouya Kheradpour, Daniel S. Kim, Anthony Kirilusha, R. Klein, B. Knoechel, Samantha Kuan, M. Kulik, Sushant Kumar, A. Kundaje, T. Kutyavin, Julien Lagarde, B. Lajoie, Nicole J. Lambert, John E Lazar, Ah Young Lee, Donghoon Lee, Elizabeth Lee, Jin-Wook Lee, Kristen Lee, C. Leslie, Shawn E. Levy, Bin Li, Hai-Ri Li, Nan Li, Shantao Li, Xiangrui Li, Yining Li, Jin Lian, Maxwell W. Libbrecht, Shin Lin, Y. Lin, Dianbo Liu, Jason Liu, Peng Liu, Tingting Liu, X. Liu, Yaping Liu, Maria Long, S. Lou, J. Loveland, Aiping Lu, Yuheng Lu, Eric Lรฉcuyer, Lijia Ma, M. Mackiewicz, B. Mannion, M. Mannstadt, Deepa Manthravadi, G. Marinov, Fergal J. Martin, E. Mattei, Kenneth McCue, Megan McEown, G. McVicker, Sarah K. Meadows, A. Meissner, E. Mendenhall, C. L. Messer, W. Meuleman, Clifford A. Meyer, Steve Miller, Matthew G. Milton, Tejaswini Mishra, Dianna E. Moore, H. M. Moore, Samuel H. Moore, Jennifer R. Moran, A. Mortazavi, Jonathan M. Mudge, N. Munshi, Rabi Murad, R. Myers, V. Nandakumar, Preetha Nandi, A. Narasimha, Aditi K. Narayanan, H. Naughton, Fรกbio C. P. Navarro, P. Navas, Jurijs Nazarovs, Jemma Nelson, Shane J. Neph, Fidencio J. Neri, Joseph R. Nery, Amy R. Nesmith, J. S. Newberry, Kimberly M. Newberry, Vu Ngo, R. Nguyen, Tung Nguyen, Andrew Nishida, W. S. Noble, Catherine S. Novak, E. Novoa, Briana Nuรฑez, C. W. O'Donnell, S. Olson, Kathrina C. Onate, Ericka Otterman, Hakan Ozadam, Michael Pagan, T. Palden, X. Pan, Yongjin P. Park, E. Partridge, B. Paten, Florencia Pauli-Behn, M. Pazin, Baikang Pei, L. Pennacchio, Alexander R. Perez, Emily Perry, D. Pervouchine, Nishigandha Phalke, Quan T. Pham, D. H. Phanstiel, I. Plajzer-Frick, G. Pratt, H. Pratt, S. Preissl, J. Pritchard, Y. Pritykin, Michael J. Purcaro, Qian Qin, Giovanni Quinones-Valdez, Ines Rabano, Ernest Radovani, Anil Raj, N. Rajagopal, Oren Ram, L. Ramรญrez, Ricardo N. Ramirez, D. Rausch, S. Raychaudhuri, Joseph Raymond, Rozita Razavi, Timothy E. Reddy, Thomas M. Reimonn, Bing Ren, A. Reymond, Alex P. Reynolds, S. Rhie, Johannes Rinn, Miguel Rivera, J. Rivera-Mulia, Brian S. Roberts, J. Rodrรญguez, J. Rozowsky, Russell Ryan, Eric Rynes, Denis Salins, R. Sandstrom, Takayo Sasaki, S. Sathe, D. Savic, A. Scavelli, J. Scheiman, Christoph N. Schlaffner, J. Schloss, F. Schmitges, L. See, A. Sethi, M. Setty, A. Shafer, Shuo Shan, Eilon Sharon, Quan Shen, Yin Shen, R. Sherwood, Minyi Shi, Sunyoung Shin, N. Shoresh, Kyle T. Siebenthall, Cristina Sisu, T. Slifer, C. A. Sloan, Anna M. Smith, V. Snetkova, Michael P. Snyder, D. Spacek, Sharanya Srinivasan, R. Srivas, G. Stamatoyannopoulos, J. Stamatoyannopoulos, Rebecca Stanton, D. Steffan, Sandra Stehling-Sun, J. Strattan, Amanda Su, B. Sundararaman, M. Suner, Tahin Syed, Matt Szynkarek, Forrest Tanaka, D. Tenen, Mingxiang Teng, Jeffrey A. Thomas, David E. Toffey, M. Tress, Diane Trout, G. Trynka, J. Tsuji, S. Upchurch, Oana Ursu, Barbara Uszczynska-Ratajczak, Mia C. Uziel, A. Valencia, B. V. Biber, A. van der Velde, Eric L. Van Nostrand, Yekaterina Vaydylevich, Jesรบs Vรกzquez, Alec Victorsen, J. Vielmetter, J. Vierstra, A. Visel, A. Vlasova, Christopher M. Vockley, S. Volpi, Shinny Vong, Hao Wang, Mengchi Wang, Qin Wang, Ruth Wang, Tao Wang, Wen Wang, Xiao-feng Wang, Yanli Wang, N. Watson, Xintao Wei, Zhijie Wei, Hendrik Weisser, S. Weissman, Rene Welch, R. Welikson, Z. Weng, H. Westra, J. Whitaker, Collin G. White, Kevin P. White, Andre Wildberg, B. Williams, D. Wine, Heather Witt, B. Wold, Maxim Y Wolf, J. Wright, Rui Xiao, Xinshu Xiao, Jie Xu, Jinrui Xu, Koon-Kiu Yan, Yongqi Yan, Hongbo Yang, Xinqiong Yang, Yi-Wen Yang, G. Yardฤฑmcฤฑ, Brian A. Yee, Gene W. Yeo, Taylor Young, Tianxiong Yu, Feng Yue, C. Zaleski, C. Zang, Haoyang Zeng, Weihua Zeng, D. Zerbino, J. Zhai, L. Zhan, Y. Zhan, Bo Zhang, Jialing Zhang, Jing Zhang, Kaijie Zhang, Lijun Zhang, Peng Zhang, Qi Zhang, Xiao-ou Zhang, Yanxiao Zhang, Zhizhuo Zhang, Yuan Zhao, Ye Zheng, Guoqing Zhong, Xiao-Qiao Zhou, Yun Zhu, Jared Zimmerman, Michael P. Snyder, Bing Ren, R. Hardison, J. M. Cherry, Bradley E. Bernstein, E. Mendenhall, Paul Flicek
6 2020
6
๐Ÿœ
๐Ÿฆ Predicting the impact of non-coding variants on DNA methylation
Haoyang Zeng, D. Gifford
6 2016
6
๐Ÿฆ
๐Ÿฆ Quantification of Uncertainty in Peptide-MHC Binding Prediction Improves High-Affinity Peptide Selection for Therapeutic Design.
Haoyang Zeng, D. Gifford
5 2019
5
๐Ÿฆ
๐Ÿฆ GERV: A Statistical Method for Generative Evaluation of Regulatory Variants for Transcription Factor Binding
Haoyang Zeng, Tatsunori B. Hashimoto, Daniel D. Kang, D. Gifford
5 2015
5
๐Ÿฆ
๐Ÿœ Predicting gene expression in massively parallel reporter assays: A comparative study
23 auth. Anat Kreimer, Haoyang Zeng, Matthew D. Edwards, Yuchun Guo, Kevin Tian, Sunyoung Shin, Rene Welch, Michael Wainberg, Ramkumar Veppathur Mohan, Nicholas A. Sinnott-Armstrong, ... Yue Li, Gรถkรงen Eraslan, Talal Amin, R. Tewhey, Pardis C Sabeti, Jonathan Goke, N. Mueller, Manolis Kellis, A. Kundaje, Michael A. Beer, S. KeleลŸ, D. Gifford, N. Yosef
5 2017
5
๐Ÿœ
๐Ÿฌ A novel k-mer set memory (KSM) motif representation improves regulatory variant prediction
Yuchun Guo, Kevin Tian, Haoyang Zeng, Xiaoyun Guo, D. Gifford
5 2017
5
๐Ÿฌ