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Expanded encyclopaedias of DNA elements in the human and mouse genomes
63 auth.
Jill E. Moore,
Michael J. Purcaro,
H. Pratt,
C. Epstein,
N. Shoresh,
Jessika Adrian,
T. Kawli,
Carrie A. Davis,
A. Dobin,
R. Kaul,
J. Halow,
Eric L. Van Nostrand,
Peter Freese,
David U. Gorkin,
Yin Shen,
...
Yupeng He,
M. Mackiewicz,
Florencia Pauli-Behn,
B. Williams,
A. Mortazavi,
C. Keller,
Xiao-ou Zhang,
Shaimae I. Elhajjajy,
Jack Huey,
D. Dickel,
V. Snetkova,
Xintao Wei,
Xiao-feng Wang,
J. Rivera-Mulia,
J. Rozowsky,
Jing Zhang,
S. Chhetri,
Jialing Zhang,
Alec Victorsen,
K. White,
A. Visel,
Gene W. Yeo,
C. Burge,
Eric Lécuyer,
D. Gilbert,
J. Dekker,
Johannes Rinn,
E. Mendenhall,
J. Ecker,
Manolis Kellis,
R. Klein,
W. S. Noble,
A. Kundaje,
R. Guigó,
P. Farnham,
J. Cherry,
R. Myers,
B. Ren,
B. Graveley,
M. Gerstein,
L. Pennacchio,
Michael P. Snyder,
B. Bernstein,
B. Wold,
R. Hardison,
T. Gingeras,
J. Stamatoyannopoulos,
Z. Weng
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10 |
2020 |
10 🐜
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Robust transcriptome-wide discovery of RNA binding protein binding sites with enhanced CLIP (eCLIP)
14 auth.
Eric L. Van Nostrand,
G. Pratt,
Alexander A. Shishkin,
C. Gelboin-Burkhart,
Mark Y. Fang,
B. Sundararaman,
S. Blue,
Thai B. Nguyen,
Christine Surka,
Keri Elkins,
...
Rebecca Stanton,
F. Rigo,
M. Guttman,
Gene W. Yeo
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10 |
2016 |
10 🦁
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Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
131 auth.
M. Gerstein,
Z. Lu,
Eric L. Van Nostrand,
Chao Cheng,
Bradley I. Arshinoff,
Tao Liu,
Kevin Y. Yip,
R. Robilotto,
A. Rechtsteiner,
Kohta Ikegami,
P. Alves,
A. Chateigner,
M. Perry,
M. Morris,
Raymond K. Auerbach,
...
Xin Feng,
Jing Leng,
A. Vielle,
W. Niu,
Kahn Rhrissorrakrai,
A. Agarwal,
Roger P. Alexander,
G. Barber,
Cathleen Brdlik,
J. Brennan,
J. Brouillet,
Adrian Carr,
Ming-Sin Cheung,
H. Clawson,
S. Contrino,
Luke O Dannenberg,
A. Dernburg,
A. Desai,
L. Dick,
A. Dosé,
Jiang Du,
Thea A. Egelhofer,
Sevinç Ercan,
G. Euskirchen,
B. Ewing,
E. Feingold,
R. Gassmann,
P. Good,
P. Green,
F. Gullier,
M. Gutwein,
M. Guyer,
L. Habegger,
Ting Han,
J. Henikoff,
Stefan R. Henz,
A. Hinrichs,
H. Holster,
T. Hyman,
A. Iniguez,
J. Janette,
M. Jensen,
Masaomi Kato,
W. Kent,
E. Kephart,
Vishal Khivansara,
Ekta Khurana,
John K. Kim,
P. Kolasinska-Zwierz,
E. Lai,
I. Latorre,
A. Leahey,
S. Lewis,
P. Lloyd,
L. Lochovsky,
R. Lowdon,
Yaniv Lubling,
R. Lyne,
M. MacCoss,
Sebastian D. Mackowiak,
Marco Mangone,
S. McKay,
D. Mecenas,
Gennifer E. Merrihew,
David M. Miller,
A. Muroyama,
J. Murray,
S. Ooi,
Hoang N. Pham,
T. Phippen,
E. Preston,
N. Rajewsky,
Gunnar Rätsch,
Heidi Rosenbaum,
J. Rozowsky,
Kim M Rutherford,
P. Ruzanov,
M. Sarov,
Rajkumar Sasidharan,
A. Sboner,
P. Scheid,
E. Segal,
Hyunjin Shin,
C. Shou,
F. Slack,
C. Slightam,
Richard Smith,
W. C. Spencer,
E. Stinson,
S. Taing,
T. Takasaki,
D. Vafeados,
K. Voronina,
Guilin Wang,
N. Washington,
Christina M. Whittle,
Beijing Wu,
Koon-Kiu Yan,
G. Zeller,
Z. Zha,
Mei Zhong,
Xingliang Zhou,
J. Ahringer,
S. Strome,
K. Gunsalus,
G. Micklem,
X. Liu,
V. Reinke,
Stuart K. Kim,
L. Hillier,
S. Henikoff,
F. Piano,
M. Snyder,
L. Stein,
J. Lieb,
R. Waterston
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9 |
2010 |
9 🐜
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A large-scale binding and functional map of human RNA-binding proteins
38 auth.
Eric L. Van Nostrand,
Peter Freese,
G. Pratt,
Xiaofeng Wang,
Xintao Wei,
Rui Xiao,
S. Blue,
Daniel Dominguez,
Neal A. L. Cody,
S. Olson,
B. Sundararaman,
L. Zhan,
C. Bazile,
Louis Philip Benoit Bouvrette,
Jia-Yu Chen,
...
M. Duff,
Keri E. Garcia,
C. Gelboin-Burkhart,
Abigail Hochman,
Nicole J. Lambert,
Hai-Ri Li,
Thai B. Nguyen,
T. Palden,
Ines Rabano,
S. Sathe,
Rebecca Stanton,
Julie Bergalet,
Bing Zhou,
Amanda Su,
Ruth Wang,
Brian A. Yee,
Ashley L. Louie,
S. Aigner,
Xiang-Dong Fu,
Eric Lécuyer,
C. Burge,
B. Graveley,
Gene W. Yeo
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9 |
2020 |
9 🦁
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Sequence, Structure and Context Preferences of Human RNA Binding Proteins
13 auth.
Daniel Dominguez,
Peter Freese,
M. Alexis,
Amanda Su,
Myles Hochman,
T. Palden,
C. Bazile,
Nicole J. Lambert,
Eric L. Van Nostrand,
G. Pratt,
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Gene W. Yeo,
B. Graveley,
C. Burge
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8 |
2017 |
8 🐜
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Identification and analysis of alternative splicing events conserved in human and mouse.
Gene W. Yeo,
Eric L. Van Nostrand,
D. Holste,
T. Poggio,
C. Burge
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8 |
2005 |
8 🐬
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General and specific functions of exonic splicing silencers in splicing control.
Zefeng Wang,
Xinshu Xiao,
Eric L. Van Nostrand,
C. Burge
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7 |
2006 |
7 🐬
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Widespread RNA editing dysregulation in brains from autistic individuals
15 auth.
Stephen S. Tran,
Hyun-Ik Jun,
J. Bahn,
Adel Azghadi,
Gokul Ramaswami,
Eric L. Van Nostrand,
Thai B. Nguyen,
Y. Hsiao,
Changhoon Lee,
G. Pratt,
...
V. Martínez‐Cerdeño,
R. Hagerman,
Gene W. Yeo,
D. Geschwind,
Xinshu Xiao
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7 |
2018 |
7 🐜
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Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins
17 auth.
Eric L. Van Nostrand,
G. Pratt,
Brian A. Yee,
Emily C. Wheeler,
S. Blue,
Jasmine R. Mueller,
Samuel S. Park,
Keri E. Garcia,
C. Gelboin-Burkhart,
Thai B. Nguyen,
...
Ines Rabano,
Rebecca Stanton,
B. Sundararaman,
Ruth Wang,
Xiang-Dong Fu,
B. Graveley,
Gene W. Yeo
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7 |
2019 |
7 🦁
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SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.
12 auth.
Kristopher W Brannan,
Wenhao Jin,
Stephanie C. Huelga,
Charles A. S. Banks,
J. Gilmore,
L. Florens,
...
M. Washburn,
Eric L. Van Nostrand,
G. Pratt,
Marie K Schwinn,
D. Daniels,
Gene W. Yeo
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7 |
2016 |
7 🐜
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Advances and challenges in the detection of transcriptome‐wide protein–RNA interactions
Emily C. Wheeler,
Eric L. Van Nostrand,
Gene W. Yeo
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7 |
2017 |
7 🐬
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Resources for the comprehensive discovery of functional RNA elements
17 auth.
B. Sundararaman,
L. Zhan,
S. Blue,
Rebecca Stanton,
Keri Elkins,
S. Olson,
Xintao Wei,
Eric L. Van Nostrand,
G. Pratt,
Stephanie C. Huelga,
...
Brendan M. Smalec,
Xiaofeng Wang,
Eurie L. Hong,
Jean M. Davidson,
Eric Lécuyer,
B. Graveley,
Gene W. Yeo
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6 |
2015 |
6 🐜
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