|
🐬
|
The Molecular Signatures Database Hallmark Gene Set Collection
A. Liberzon,
Chet Birger,
H. Thorvaldsdóttir,
M. Ghandi,
J. Mesirov,
P. Tamayo
|
12 |
2015 |
12
🐬
|
|
🐬
|
The Molecular Signatures Database (MSigDB) hallmark gene set collection.
A. Liberzon,
Chet Birger,
H. Thorvaldsdóttir,
M. Ghandi,
J. Mesirov,
P. Tamayo
|
11 |
2015 |
11
🐬
|
|
🐜
|
Toil enables reproducible, open source, big biomedical data analyses
27 auth.
John Vivian,
A. Rao,
Frank A. Nothaft,
Christopher Ketchum,
J. Armstrong,
Adam M. Novak,
Jacob Pfeil,
Jake Narkizian,
A. Deran,
Audrey Musselman-Brown,
Hannes Schmidt,
P. Amstutz,
Brian Craft,
M. Goldman,
K. Rosenbloom,
...
M. Cline,
Brian D. O’Connor,
M. Hanna,
Chet Birger,
W. Kent,
D. Patterson,
A. Joseph,
Jingchun Zhu,
S. Zaranek,
G. Getz,
D. Haussler,
B. Paten
|
9 |
2017 |
9
🐜
|
|
🐜
|
Genetic and transcriptional evolution alters cancer cell line drug response
30 auth.
U. Ben-David,
B. Siranosian,
G. Ha,
Helen Tang,
Yaara Oren,
Kunihiko Hinohara,
C. Strathdee,
Joshua M. Dempster,
Nicholas J. Lyons,
Robert T. Burns,
Anwesha Nag,
G. Kugener,
B. Cimini,
Peter Tsvetkov,
Y. Maruvka,
...
Ryan O’Rourke,
Anthony J. Garrity,
Andrew A. Tubelli,
P. Bandopadhayay,
Aviad Tsherniak,
F. Vazquez,
Bang Wong,
Chet Birger,
M. Ghandi,
A. Thorner,
Joshua A. Bittker,
M. Meyerson,
G. Getz,
R. Beroukhim,
T. Golub
|
9 |
2018 |
9
🐜
|
|
🐜
|
Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy
95 auth.
Karsten Krug,
Eric J. Jaehnig,
S. Satpathy,
L. Blumenberg,
A. Karpova,
M. Anurag,
G. Miles,
Philipp Mertins,
Philipp Mertins,
Y. Geffen,
Lauren C. Tang,
Lauren C. Tang,
David I Heiman,
Song Cao,
Y. Maruvka,
...
Jonathan T. Lei,
Chen Huang,
Ramani Kothadia,
A. Colaprico,
Chet Birger,
Jarey H. Wang,
Yongchao Dou,
Bo Wen,
Zhiao Shi,
Yuxing Liao,
M. Wiznerowicz,
M. Wiznerowicz,
Matthew A. Wyczalkowski,
X. Chen,
Jacob J. Kennedy,
A. Paulovich,
M. Thiagarajan,
C. Kinsinger,
Tara Hiltke,
Emily Boja,
M. Mesri,
A. Robles,
H. Rodriguez,
Thomas F. Westbrook,
L. Ding,
G. Getz,
G. Getz,
K. Clauser,
D. Fenyö,
Kelly V. Ruggles,
Bing Zhang,
D. Mani,
Steve Carr,
M. Ellis,
Michael A. Gillette,
Michael A. Gillette,
S. Avanessian,
S. Cai,
Daniel W. Chan,
Xian Chen,
N. Edwards,
A. Hoofnagle,
M. H. Kane,
K. Ketchum,
E. Kuhn,
D. Levine,
Shunqiang Li,
D. Liebler,
Tao Liu,
Jingqin R Luo,
Subha Madhavan,
Christopher G. Maher,
J. Mcdermott,
P. McGarvey,
Mauricio Oberti,
A. Pandey,
S. Payne,
D. Ransohoff,
Robert C. Rivers,
K. Rodland,
P. Rudnick,
M. Sanders,
K. Shaw,
I. Shih,
R. Slebos,
Richard D. Smith,
Michael Snyder,
S. Stein,
D. Tabb,
Ratna R. Thangudu,
Stefani N. Thomas,
Yue Wang,
F. White,
Jeffrey R. Whiteaker,
Gordon A. Whiteley,
Hui Zhang,
Zhen Zhang,
Yingming Zhao,
Hengying Zhu,
L. Zimmerman
|
8 |
2020 |
8
🐜
|
|
🐜
|
Proteogenomic Characterization of Endometrial Carcinoma
218 auth.
Yongchao Dou,
Emily A. Kawaler,
D. Zhou,
M. Gritsenko,
Chen Huang,
L. Blumenberg,
A. Karpova,
V. Petyuk,
Sara R. Savage,
S. Satpathy,
Wenke Liu,
Yige Wu,
Chia-Feng Tsai,
Bo Wen,
Zhi Li,
...
Song Cao,
Jamie Moon,
Zhiao Shi,
MacIntosh G. Cornwell,
Matthew A. Wyczalkowski,
R. Chu,
S. Vasaikar,
Hua Zhou,
Qingsong Gao,
Ronald J. Moore,
Kai Li,
Sunantha Sethuraman,
M. Monroe,
R. Zhao,
David I Heiman,
Karsten Krug,
K. Clauser,
Ramani Kothadia,
Y. Maruvka,
Alexander R. Pico,
A. Oliphant,
E. L. Hoskins,
Samuel L. Pugh,
Sean J.I. Beecroft,
David W. Adams,
J. Jarman,
Andy T. Kong,
Hui-Yin Chang,
B. Reva,
Yuxing Liao,
Dmitry Rykunov,
A. Colaprico,
Xi Chen,
Andrzej Czekański,
Marcin Jędryka,
R. Matkowski,
M. Wiznerowicz,
Tara Hiltke,
Emily Boja,
C. Kinsinger,
M. Mesri,
A. Robles,
H. Rodriguez,
D. Mutch,
K. Fuh,
M. Ellis,
D. DeLair,
M. Thiagarajan,
D. Mani,
G. Getz,
Michael Noble,
A. Nesvizhskii,
Pei Wang,
Matthew L. Anderson,
D. Levine,
Richard D. Smith,
S. Payne,
Kelly V. Ruggles,
K. Rodland,
L. Ding,
Bing Zhang,
Tao Liu,
D. Fenyö,
A. Agarwal,
M. Anurag,
D. Avtonomov,
Chet Birger,
M. Birrer,
S. Boca,
William Bocik,
U. Borate,
M. Borucki,
Meghan C. Burke,
S. Cai,
A. Calinawan,
Steve Carr,
Sonya Carter,
Patricia D. Castro,
Sandra R. Cerda,
Michelle Chaikin,
D. Chan,
D. Chan,
Alyssa Charamut,
F. Chen,
Jin Chen,
Lijun Chen,
Lin S. Chen,
David W. Chesla,
M. Chheda,
A. Chinnaiyan,
Shrabanti Chowdhury,
M. Cieslik,
D. Clark,
S. Cottingham,
Houston W. Culpepper,
Jacob O Day,
S. Young,
E. Demir,
S. Dhanasekaran,
R. Dhir,
M. Domagalski,
P. Dottino,
B. Druker,
Elizabeth Duffy,
Maureen A. Dyer,
N. Edwards,
Robert A. Edwards,
Kim Elburn,
J. Field,
Alicia Francis,
S. Gabriel,
Y. Geffen,
Daniel J. Geiszler,
Michael A. Gillette,
A. Godwin,
Pamela Grady,
L. Hannick,
P. Hariharan,
S. Hilsenbeck,
B. Hindenach,
K. Hoadley,
R. Hong,
G. Hostetter,
J. Hsieh,
Yingwei Hu,
M. Ittmann,
Eric J. Jaehnig,
S. Jewell,
Jiayi Ji,
Corbin D. Jones,
Renee Karabon,
K. Ketchum,
Munziba Khan,
Beom-Jun Kim,
A. Krek,
Tanya Krubit,
Chandan Kumar-Sinha,
F. Leprevost,
Michael Lewis,
Q. K. Li,
Yize Li,
Hongwei Liu,
J. Lubiński,
Weiping Ma,
R. Madan,
Ewa P. Malc,
A. Malovannaya,
S. Mareedu,
S. Markey,
Annette Marrero-Oliveras,
J. Martignetti,
Jason G. McDermott,
P. McGarvey,
John McGee,
P. Mieczkowski,
F. Modugno,
Rebecca S. Montgomery,
Chelsea J. Newton,
G. Omenn,
A. Paulovich,
Amy M. Perou,
F. Petralia,
P. Piehowski,
L. Polonskaya,
L. Qi,
Shannon Richey,
Karna L. Robinson,
Nancy V. Roche,
D. Rohrer,
E. Schadt,
M. Schnaubelt,
Yan Shi,
Tara J. Skelly,
L. Sokoll,
Xiaoyu Song,
S. Stein,
J. Suh,
Donghui Tan,
Darlene Tansil,
Guo Ci Teo,
Ratna R. Thangudu,
C. Tognon,
E. Traer,
J. Tyner,
K. S. Um,
Dana R. Valley,
Negin Vatanian,
Pankaj Vats,
Uma Velvulou,
Michael Vernon,
Liang-Bo Wang,
Ying Wang,
A. Webster,
Thomas F. Westbrook,
D. Wheeler,
Jeffrey R. Whiteaker,
G. Wilson,
Yuriy Zakhartsev,
Robert Zelt,
Hui Zhang,
Yuping Zhang,
Zhen Zhang,
Grace Zhao
|
8 |
2020 |
8
🐜
|
|
🐜
|
Proteogenomic characterization of pancreatic ductal adenocarcinoma
139 auth.
L. Cao,
Chen Huang,
D. Zhou,
Yingwei Hu,
T. M. Lih,
Sara R. Savage,
Karsten Krug,
D. Clark,
M. Schnaubelt,
Lijun Chen,
F. Leprevost,
R. V. Eguez,
Weiming Yang,
Jianbo Pan,
Bo Wen,
...
Yongchao Dou,
Wen Jiang,
Yuxing Liao,
Zhiao Shi,
Nadezhda V. Terekhanova,
Song Cao,
Rita Jui-Hsien Lu,
Yize Li,
Ruiyang Liu,
Houxiang Zhu,
Peter Ronning,
Yige Wu,
Matthew A. Wyczalkowski,
H. Easwaran,
Ludmila V. Danilova,
A. Mer,
S. Yoo,
Joshua M Wang,
Wenke Liu,
B. Haibe-Kains,
M. Thiagarajan,
S. Jewell,
G. Hostetter,
Chelsea J. Newton,
Q. K. Li,
M. Roehrl,
D. Fenyö,
Pei Wang,
A. Nesvizhskii,
D. Mani,
G. Omenn,
Emily Boja,
M. Mesri,
A. Robles,
H. Rodriguez,
O. Bathe,
D. Chan,
R. Hruban,
L. Ding,
Bing Zhang,
Hui Zhang,
Mitual B. Amin,
E. An,
Christine Ayad,
Thomas Bauer,
Chet Birger,
M. Birrer,
S. Boca,
William Bocik,
M. Borucki,
S. Cai,
Steve Carr,
Sandra R. Cerda,
Huan Chen,
Steven F. Chen,
David W. Chesla,
A. Chinnaiyan,
A. Colaprico,
S. Cottingham,
Magdalena Derejska,
S. Dhanasekaran,
M. Domagalski,
B. Druker,
Elizabeth Duffy,
Maureen A. Dyer,
Nathan J. Edwards,
M. Ellis,
J. Eschbacher,
Alicia Francis,
Jesse Francis,
S. Gabriel,
N. Gabrovski,
J. Gardner,
G. Getz,
Michael A. Gillette,
C. A. Goldthwaite,
Pamela Grady,
Shuai Guo,
P. Hariharan,
Tara Hiltke,
B. Hindenach,
K. Hoadley,
Jasmine Huang,
Corbin D. Jones,
K. Ketchum,
C. Kinsinger,
J. Koziak,
K. Kuśnierz,
Tao Liu,
J. Long,
D. Mallery,
S. Mareedu,
R. Matteotti,
Nicollette Maunganidze,
P. McGarvey,
P. Minoo,
O. Paklina,
A. Paulovich,
S. Payne,
O. Potapova,
B. Pruetz,
L. Qi,
Nancy V. Roche,
K. Rodland,
D. Rohrer,
E. Schadt,
A. Shabunin,
T. Shelton,
Y. Shutack,
Shilpi Singh,
Michael V. Smith,
Richard D. Smith,
L. Sokoll,
J. Suh,
Ratna R. Thangudu,
S. Tsang,
K. S. Um,
Dana R. Valley,
Negin Vatanian,
Wenyi Wang,
G. Wilson,
M. Wiznerowicz,
Zhen Zhang,
Grace Zhao
|
8 |
2021 |
8
🐜
|
|
🐜
|
A proteogenomic portrait of lung squamous cell carcinoma
162 auth.
S. Satpathy,
Karsten Krug,
P. M. J. Beltran,
Sara R. Savage,
F. Petralia,
Chandan Kumar-Sinha,
Yongchao Dou,
B. Reva,
M. H. Kane,
S. Avanessian,
S. Vasaikar,
A. Krek,
Jonathan T. Lei,
Eric J. Jaehnig,
T. Omelchenko,
...
Y. Geffen,
Erik J. Bergstrom,
Vasileios Stathias,
K. E. Christianson,
David I Heiman,
M. Cieslik,
Song Cao,
Xiaoyu Song,
Jiayi Ji,
Wenke Liu,
Kai Li,
Bo Wen,
Yize Li,
Z. Gümüş,
M. Selvan,
R. Soundararajan,
Tanvi H Visal,
M. G. Raso,
E. Parra,
Özgün Babur,
Pankaj Vats,
Shankara K. Anand,
Tobias Schraink,
MacIntosh G. Cornwell,
F. M. Rodrigues,
Houxiang Zhu,
Chia-Kuei Mo,
Yuping Zhang,
F. Leprevost,
Chen Huang,
A. Chinnaiyan,
Matthew A. Wyczalkowski,
G. Omenn,
Chelsea J. Newton,
Stephan Schurer,
Kelly V. Ruggles,
D. Fenyö,
S. Jewell,
M. Thiagarajan,
M. Mesri,
H. Rodriguez,
Sendurai A Mani,
N. Udeshi,
G. Getz,
J. Suh,
Q. K. Li,
G. Hostetter,
P. Paik,
S. Dhanasekaran,
R. Govindan,
Li Ding,
A. Robles,
K. Clauser,
A. Nesvizhskii,
Pei Wang,
Steve Carr,
Bing Zhang,
D. Mani,
Michael A. Gillette,
Alex E. Green,
Alfredo Molinolo,
Alicia Francis,
A. Paulovich,
Andrii Karnuta,
A. Colaprico,
B. Hindenach,
B. Pruetz,
B. Kubisa,
B. Druker,
Carissa A. Huynh,
C. A. Goldthwaite,
Chet Birger,
C. Kinsinger,
Corbin D. Jones,
D. Rohrer,
Dana R. Valley,
D. Chan,
David W. Chesla,
D. Hansel,
E. Ponomareva,
Elizabeth Duffy,
E. Burks,
E. Schadt,
E. S. Fedorov,
E. An,
Fei Ding,
G. Wilson,
H. Batra,
Hui Zhang,
Jennifer E. Maas,
J. Eschbacher,
K. Ketchum,
K. Rodland,
K. Hoadley,
Kei Suzuki,
K. S. Um,
L. Qi,
L. Bernard,
M. Wiznerowicz,
M. Wojtyś,
M. Domagalski,
M. Ellis,
Maureen A. Dyer,
M. Borucki,
M. Anurag,
M. Birrer,
Midie Xu,
M. Krotevich,
Nancy V. Roche,
N. Edwards,
Negin Vatanian,
N. R. Mucci,
Nicollette Maunganidze,
N. Gabrovski,
O. Potapova,
O. Fadare,
Pamela Grady,
P. McGarvey,
P. Hariharan,
Ratna R. Thangudu,
Rebecca Montgomery,
R. Pandurengan,
Richard D. Smith,
R. Welsh,
S. Mareedu,
S. Payne,
S. Cottingham,
Shilpi Singh,
S. Tsang,
S. Cai,
S. Gabriel,
Tao Liu,
Tara Hiltke,
T. Vashist,
Thomas Bauer,
V. Sovenko,
Warren G. Tourtellotte,
Weiping Ma,
William Bocik,
Wohaib Hasan,
Xiaojun Jing,
Ximing Tang,
Yuxing Liao,
Yvonne,
Shutack,
Zhen Zhang,
Ziad Hanhan
|
7 |
2021 |
7
🐜
|
|
🐜
|
Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness.
161 auth.
Yize Li,
T. Lih,
S. Dhanasekaran,
R. Mannan,
Lijun Chen,
M. Cieslik,
Yige Wu,
Rita Jui-Hsien Lu,
D. Clark,
Iga Kołodziejczak,
R. Hong,
Siqi Chen,
Yanyan Zhao,
Seema Chugh,
Wagma Caravan,
...
Nataly Naser Al Deen,
Noshad Hosseini,
Chelsea J. Newton,
Karsten Krug,
Yuanwei Xu,
Kyung-Cho Cho,
Yingwei Hu,
Yuping Zhang,
Chandan Kumar-Sinha,
Weiping Ma,
A. Calinawan,
Matthew A. Wyczalkowski,
M. Wendl,
Yuefan Wang,
Shenghao Guo,
Cissy Zhang,
A. Le,
Aniket Dagar,
A. Hopkins,
Hanbyul Cho,
F. Leprevost,
Xiaojun Jing,
Guo Ci Teo,
Wenke Liu,
M. Reimers,
R. Pachynski,
A. Lazar,
A. Chinnaiyan,
B. V. Van Tine,
Bing‐yu Zhang,
K. Rodland,
G. Getz,
D. Mani,
Pei Wang,
F. Chen,
G. Hostetter,
M. Thiagarajan,
W. Linehan,
D. Fenyö,
S. Jewell,
G. Omenn,
R. Mehra,
M. Wiznerowicz,
A. Robles,
M. Mesri,
Tara Hiltke,
E. An,
Henry Rodriguez,
Daniel W. Chan,
C. Ricketts,
A. Nesvizhskii,
Hui Zhang,
Li Ding,
Alicia Francis,
A. Paulovich,
A. Antczak,
Anthony Green,
A. Colaprico,
A. Hakimi,
B. Pruetz,
B. Hindenach,
B. Yadav,
B. Reva,
Brenda Fevrier-Sullivan,
B. Druker,
C. Szczylik,
C. A. Goldthwaite,
Chet Birger,
Corbin D. Jones,
D. Rohrer,
Darlene Tansil,
David W. Chesla,
David I Heiman,
Elizabeth Duffy,
Erin Schadt,
F. Petralia,
G. Bromiński,
G. Quiroga-Garza,
G. Wilson,
Ginny X. Li,
Grace Zhao,
Y. Hsiao,
J. Hsieh,
J. Lubiński,
Jasmin H. Bavarva,
Jasmine Huang,
J. Hafron,
J. Eschbacher,
Jennifer Hon,
Jesse Francis,
J. Freymann,
Josh N. Vo,
Joshua M Wang,
J. Kirby,
Kakhaber Zaalishvili,
K. Ketchum,
K. Hoadley,
K. S. Um,
L. Qi,
M. Domagalski,
Matt Tobin,
Maureen A. Dyer,
M. Anurag,
M. Borucki,
Michael A. Gillette,
M. Birrer,
M. Ittmann,
M. Roehrl,
M. Schnaubelt,
Michael V. Smith,
M. Fam,
Nancy V. Roche,
Negin Vatanian,
Nicollette Maunganidze,
O. Potapova,
O. Paklina,
Pamela VanderKolk,
Patricia D. Castro,
Paweł Kurzawa,
P. Hariharan,
Qin Li,
Q. K. Li,
R. Dhir,
Ratna R. Thangudu,
Rebecca Montgomery,
Richard D. Smith,
S. Mareedu,
S. Payne,
Sandra R. Cerda,
S. Cottingham,
Sarah Haynes,
S. Satpathy,
Shannon Richey,
Shilpi Singh,
S. Tsang,
Shuang Cai,
Song Cao,
S. Gabriel,
Steve Carr,
T. Liu,
Thomas Bauer,
Toan Le,
X. S. Chen,
Xu Zhang,
Y. Shutack,
Zhen Zhang
|
6 |
2022 |
6
🐜
|
|
🐜
|
Characterizing genomic alterations in cancer by complementary functional associations
35 auth.
Jong Wook Kim,
O. Botvinnik,
Omar O. Abudayyeh,
Chet Birger,
Joseph Rosenbluh,
Y. Shrestha,
M. Abazeed,
P. Hammerman,
D. Dicara,
David J. Konieczkowski,
Cory M. Johannessen,
A. Liberzon,
A. R. Alizad-Rahvar,
G. Alexe,
A. Aguirre,
...
M. Ghandi,
H. Greulich,
F. Vazquez,
B. Weir,
E. V. Van Allen,
Aviad Tsherniak,
Diane D. Shao,
Travis Zack,
M. Noble,
G. Getz,
R. Beroukhim,
L. Garraway,
M. Ardakani,
C. Romualdi,
G. Sales,
D. Barbie,
J. Boehm,
W. Hahn,
J. Mesirov,
P. Tamayo
|
6 |
2016 |
6
🐜
|
|
🐜
|
Proteogenomic data and resources for pan-cancer analysis.
130 auth.
Yize Li,
Yongchao Dou,
Felipe da Veiga Leprevost,
Y. Geffen,
A. Calinawan,
F. Aguet,
Y. Akiyama,
Shankara K. Anand,
Chet Birger,
Song Cao,
Rekha Chaudhary,
Padmini Chilappagari,
M. Cieslik,
A. Colaprico,
D. Zhou,
...
Corbin Day,
M. Domagalski,
Myvizhi Esai Selvan,
D. Fenyö,
S. Foltz,
Alicia Francis,
Tania J. González-Robles,
Z. Gümüş,
David I Heiman,
M. Holck,
R. Hong,
Yingwei Hu,
Eric J. Jaehnig,
Jiayi Ji,
Wen Jiang,
L. Katsnelson,
K. Ketchum,
R. Klein,
Jonathan T. Lei,
Wen-Wei Liang,
Yuxing Liao,
Caleb M Lindgren,
Weiping Ma,
Lei Ma,
M. MacCoss,
Fernanda Martins Rodrigues,
Wilson H. McKerrow,
N. Nguyen,
R. Oldroyd,
Alexander R Pilozzi,
Pietro Pugliese,
B. Reva,
P. Rudnick,
Kelly V. Ruggles,
Dmitry Rykunov,
Sara R. Savage,
M. Schnaubelt,
Tobias Schraink,
Zhiao Shi,
Deepak Singhal,
Xiaoyu Song,
E. Storrs,
Nadezhda V. Terekhanova,
Ratna R. Thangudu,
M. Thiagarajan,
Liang-Bo Wang,
Joshua M Wang,
Ying Wang,
Bo Wen,
Yige Wu,
Matthew A. Wyczalkowski,
Yi Xin,
L. Yao,
Xinpei Yi,
Hui Zhang,
Qing Zhang,
Maya Zuhl,
G. Getz,
Li Ding,
A. Nesvizhskii,
Pei Wang,
Ana I Robles,
Bing Zhang,
S. Payne,
A. Lazar,
A. Paulovich,
A. Iavarone,
A. Chinnaiyan,
B. Druker,
Chandan Kumar-Sinha,
Chelsea J. Newton,
Chen Huang,
D. Mani,
Richard D. Smith,
Emily M Huntsman,
E. Schadt,
E. An,
F. Petralia,
G. Hostetter,
G. Omenn,
Han-Byoul Cho,
Henry Rodriguez,
Iga Kołodziejczak,
Jared L. Johnson,
Jasmin H. Bavarva,
Jimin Tan,
K. Rodland,
K. Clauser,
Karsten Krug,
L. Cantley,
M. Wiznerowicz,
M. Ellis,
M. Anurag,
M. Mesri,
Michael A. Gillette,
M. Birrer,
M. Ceccarelli,
S. Dhanasekaran,
Nathan Edwards,
N. Tignor,
Özgün Babur,
Sara J. C. Gosline,
S. Jewell,
S. Satpathy,
Shrabanti Chowdhury,
S. Schürer,
Steve Carr,
T. Liu,
Tara Hiltke,
Tomer M. Yaron,
Vasileios Stathias,
Wenke Liu,
Xu Zhang,
Yizhe Song,
Zhen Zhang
|
6 |
2023 |
6
🐜
|
|
🐜
|
Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation
124 auth.
Y. Geffen,
Shankara K. Anand,
Y. Akiyama,
Tomer M. Yaron,
Yizhe Song,
Jared L. Johnson,
Akshay Govindan,
Özgün Babur,
Yize Li,
Emily M Huntsman,
Liang-Bo Wang,
Chet Birger,
David I Heiman,
Qing Zhang,
Mendy Miller,
...
Y. Maruvka,
N. Haradhvala,
A. Calinawan,
Saveliy Belkin,
A. Kerelsky,
K. Clauser,
Karsten Krug,
S. Satpathy,
S. Payne,
D. Mani,
Michael A. Gillette,
S. Dhanasekaran,
M. Thiagarajan,
M. Mesri,
H. Rodriguez,
Ana I Robles,
Steve Carr,
A. Lazar,
F. Aguet,
L. Cantley,
Li Ding,
G. Getz,
E. An,
M. Anurag,
Jasmin H. Bavarva,
M. Birrer,
Song Cao,
M. Ceccarelli,
Daniel W. Chan,
A. Chinnaiyan,
Hanbyul Cho,
Shrabanti Chowdhury,
M. Cieslik,
A. Colaprico,
D. Zhou,
F. Leprevost,
Corbin Day,
M. Domagalski,
Yongchao Dou,
B. Druker,
Nathan Edwards,
M. Ellis,
M. Selvan,
D. Fenyo,
S. Foltz,
Alicia Francis,
Tania J. Gonzalez Robles,
Sara J. C. Gosline,
Z. Gümüş,
Tara Hiltke,
R. Hong,
G. Hostetter,
Yingwei Hu,
Chen Huang,
A. Iavarone,
Eric J. Jaehnig,
Scott D. Jewel,
Jiayi Ji,
Wen Jiang,
L. Katsnelson,
K. Ketchum,
Iga Kołodziejczak,
Chandan Kumar-Sinha,
Jonathan T. Lei,
Wen-Wei Liang,
Yuxing Liao,
Caleb M Lindgren,
T. Liu,
Wenke Liu,
Weiping Ma,
F. M. Rodrigues,
Wilson H. McKerrow,
A. Nesvizhskii,
Chelsea J. Newton,
R. Oldroyd,
G. Omenn,
A. Paulovich,
F. Petralia,
Pietro Pugliese,
B. Reva,
K. Rodland,
Kelly V. Ruggles,
Dmitry Rykunov,
Sara R. Savage,
E. Schadt,
M. Schnaubelt,
Tobias Schraink,
Zhiao Shi,
Richard D. Smith,
Xiaoyu Song,
Vasileios Stathias,
E. Storrs,
Jimin Tan,
Nadezhda V. Terekhanova,
Ratna R. Thangudu,
N. Tignor,
Joshua M Wang,
Pei Wang,
Ying Wang,
Bo Wen,
M. Wiznerowicz,
Yige Wu,
Matthew A. Wyczalkowski,
L. Yao,
Xinpei Yi,
Bing Zhang,
Hui Zhang,
Xu Zhang,
Zhen Zhang
|
6 |
2023 |
6
🐜
|
|
🐜
|
Pan-cancer proteogenomics connects oncogenic drivers to functional states
123 auth.
Yize Li,
E. Porta-Pardo,
Collin J Tokheim,
Matthew H. Bailey,
Tomer M. Yaron,
Vasileios Stathias,
Y. Geffen,
Kathleen J. Imbach,
Song Cao,
Shankara K. Anand,
Y. Akiyama,
Wenke Liu,
Matthew A. Wyczalkowski,
Yizhe Song,
E. Storrs,
...
M. Wendl,
Wubing Zhang,
Mustafa Sibai,
Victoria Ruiz-Serra,
Wen-Wei Liang,
Nadezhda V. Terekhanova,
F. M. Rodrigues,
K. Clauser,
David I Heiman,
Qing Zhang,
F. Aguet,
A. Calinawan,
S. Dhanasekaran,
Chet Birger,
S. Satpathy,
D. Zhou,
Liang-Bo Wang,
Jessika Baral,
Jared L. Johnson,
Emily M Huntsman,
Pietro Pugliese,
A. Colaprico,
A. Iavarone,
M. Chheda,
C. Ricketts,
D. Fenyö,
S. Payne,
Henry Rodriguez,
Ana I Robles,
Michael A. Gillette,
Chandan Kumar-Sinha,
A. Lazar,
L. Cantley,
G. Getz,
Li Ding,
E. An,
M. Anurag,
Jasmin H. Bavarva,
M. Birrer,
A. Calinawan,
M. Ceccarelli,
Daniel W. Chan,
A. Chinnaiyan,
Han-Byoul Cho,
Shrabanti Chowdhury,
M. Cieslik,
F. Leprevost,
Corbin Day,
M. Domagalski,
Yongchao Dou,
B. Druker,
Nathan Edwards,
M. Ellis,
M. Selvan,
S. Foltz,
Alicia Francis,
Tania J. Gonzalez Robles,
Sara J. C. Gosline,
Z. Gümüş,
Tara Hiltke,
R. Hong,
G. Hostetter,
Yingwei Hu,
Chen Huang,
Emily M Huntsman,
Eric J. Jaehnig,
Scott D. Jewel,
Jiayi Ji,
Wen Jiang,
L. Katsnelson,
K. Ketchum,
Iga Kołodziejczak,
Jonathan T. Lei,
Yuxing Liao,
Caleb M Lindgren,
T. Liu,
Weiping Ma,
Wilson H. McKerrow,
A. Nesvizhskii,
Chelsea J. Newton,
R. Oldroyd,
G. Omenn,
A. Paulovich,
F. Petralia,
B. Reva,
K. Rodland,
Kelly V. Ruggles,
Dmitry Rykunov,
Sara R. Savage,
E. Schadt,
M. Schnaubelt,
Tobias Schraink,
Zhiao Shi,
Richard D. Smith,
Xiaoyu Song,
Jimin Tan,
Ratna R. Thangudu,
N. Tignor,
Joshua M Wang,
Pei Wang,
Ying Wang,
Bo Wen,
M. Wiznerowicz,
Xinpei Yi,
Bing Zhang,
Hui Zhang,
Xu Zhang,
Zhen Zhang
|
5 |
2023 |
5
🐜
|
