BetterScholar BetterScholar
12
Role
Title
Level Year L/R
🐜 Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
310 auth. E. Birney, J. Stamatoyannopoulos, A. Dutta, R. Guigó, T. Gingeras, E. Margulies, Z. Weng, M. Snyder, E. Dermitzakis, R. Thurman, Michael S. Kuehn, Christopher M. Taylor, Shane J. Neph, Christoph M. Koch, S. Asthana, ... A. Malhotra, I. Adzhubei, J. Greenbaum, R. Andrews, Paul Flicek, Patrick J Boyle, Hua Cao, N. Carter, Gayle K. Clelland, S. Davis, Nathan Day, P. Dhami, Shane C. Dillon, M. Dorschner, H. Fiegler, P. Giresi, J. Goldy, M. Hawrylycz, Andrew K. Haydock, R. Humbert, K. James, Brett E. Johnson, Ericka M. Johnson, Tristan Frum, Elizabeth R. Rosenzweig, N. Karnani, K. Lee, Gregory Lefebvre, P. Navas, Fidencio V. Neri, Stephen C. J. Parker, P. Sabo, R. Sandstrom, A. Shafer, D. Vetrie, M. Weaver, S. Wilcox, Man Yu, F. Collins, J. Dekker, J. Lieb, T. Tullius, G. Crawford, S. Sunyaev, W. S. Noble, I. Dunham, F. Denoeud, A. Reymond, P. Kapranov, J. Rozowsky, D. Zheng, R. Castelo, A. Frankish, J. Harrow, Srinka Ghosh, A. Sandelin, I. Hofacker, R. Baertsch, Damian Keefe, S. Dike, Jill Cheng, H. Hirsch, E. Sekinger, Julien Lagarde, J. F. Abril, Atif Shahab, Christoph Flamm, C. Fried, J. Hackermüller, Jana Hertel, Manja Lindemeyer, Kristin Missal, Andrea Tanzer, Stefan Washietl, J. Korbel, O. Emanuelsson, J. S. Pedersen, N. Holroyd, Ruth Taylor, D. Swarbreck, N. Matthews, M. Dickson, D. Thomas, M. Weirauch, J. Gilbert, J. Drenkow, I. Bell, X. Zhao, K. Srinivasan, W. Sung, H. Ooi, K. Chiu, S. Foissac, T. Alioto, M. Brent, L. Pachter, M. Tress, A. Valencia, S. Choo, C. Choo, C. Ucla, C. Manzano, Carine Wyss, E. Cheung, T. Clark, James B. Brown, M. Ganesh, Sandeep Patel, H. Tammana, Jacqueline Chrast, Charlotte N. Henrichsen, C. Kai, J. Kawai, Ugrappa Nagalakshmi, Jiaqian Wu, Zheng Lian, Jin Lian, P. Newburger, Xueqing Zhang, P. Bickel, J. Mattick, Piero Carninci, Y. Hayashizaki, S. Weissman, T. Hubbard, R. M. Myers, J. Rogers, P. Stadler, T. Lowe, Chia-Lin Wei, Y. Ruan, K. Struhl, M. Gerstein, S. Antonarakis, Yutao Fu, E. Green, Ulas Karaöz, A. Siepel, James Taylor, L. Liefer, K. Wetterstrand, P. Good, E. Feingold, M. Guyer, G. Cooper, G. Asimenos, Colin N. Dewey, Minmei Hou, S. Nikolaev, J. Montoya-Burgos, A. Löytynoja, S. Whelan, F. Pardi, Tim Massingham, Haiyan Huang, Na Zhang, I. Holmes, J. Mullikin, A. Ureta-Vidal, B. Paten, Michael R. Seringhaus, D. Church, K. Rosenbloom, W. Kent, Eric A. Stone, S. Batzoglou, N. Goldman, R. Hardison, D. Haussler, Webb Miller, A. Sidow, N. Trinklein, Zhengdong D. Zhang, Leah Barrera, R. Stuart, D. King, A. Ameur, Stefan Enroth, M. Bieda, Jonghwan Kim, A. Bhinge, N. Jiang, Jun Liu, Fei Yao, V. Vega, C. Lee, A. Yang, Z. Moqtaderi, Zhou Zhu, Xiaoqin Xu, S. Squazzo, M. Oberley, David Inman, Michael A. Singer, T. Richmond, Kyle J. Munn, Á. Rada-Iglesias, O. Wallerman, J. Komorowski, J. Fowler, Phillippe Couttet, Alexander W. Bruce, O. Dovey, P. Ellis, C. Langford, D. Nix, G. Euskirchen, S. Hartman, A. Urban, P. Kraus, Sara Van Calcar, Nathaniel D. Heintzman, Tae Hoon Kim, Kun Wang, Chunxu Qu, G. Hon, R. Luna, C. Glass, M. Rosenfeld, S. F. Aldred, S. Cooper, Anason S. Halees, J. M. Lin, H. Shulha, Xiaoling Zhang, Mousheng Xu, Jaafar N. Haidar, Yon-Jong Yu, V. Iyer, Roland Green, C. Wadelius, P. Farnham, B. Ren, R. Harte, A. Hinrichs, Heather Trumbower, H. Clawson, Jennifer Hillman-Jackson, A. Zweig, Kayla E. Smith, Archana Thakkapallayil, G. Barber, R. Kuhn, D. Karolchik, L. Armengol, C. Bird, P. D. de Bakker, Andrew D. Kern, N. López-Bigas, Joel D Martin, B. Stranger, A. Woodroffe, Eugene Davydov, A. Dimas, E. Eyras, Ingileif B. Hallgrímsdóttir, J. Huppert, M. Zody, G. Abecasis, X. Estivill, G. Bouffard, Xiaobin Guan, Nancy F. Hansen, J. Idol, V. Maduro, Baishali Maskeri, Jennifer C Mcdowell, Morgan Park, Pamela J. Thomas, Alice C. Young, R. Blakesley, D. Muzny, E. Sodergren, D. Wheeler, K. Worley, Huaiyang Jiang, G. Weinstock, R. Gibbs, T. Graves, R. Fulton, E. Mardis, R. Wilson, M. Clamp, James A. Cuff, S. Gnerre, D. Jaffe, Jean L. Chang, K. Lindblad-Toh, E. Lander, M. Koriabine, M. Nefedov, K. Osoegawa, Y. Yoshinaga, B. Zhu, P. D. de Jong
12 2007
12
🐜
🐜 Ensembl’s 10th year
57 auth. P. Flicek, Bronwen L. Aken, B. Ballester, Kathryn M Beal, E. Bragin, Simon Brent, Yuan Chen, P. Clapham, Guy Coates, S. Fairley, Stephen Fitzgerald, J. Fernandez-Banet, Leo Gordon, S. Gräf, Syed Haider, ... M. Hammond, K. Howe, Andrew M. Jenkinson, Nathan Johnson, Andreas Kähäri, Damian Keefe, S. Keenan, R. Kinsella, F. Kokocinski, Gautier Koscielny, Eugene Kulesha, D. Lawson, Ian Longden, Tim Massingham, W. McLaren, K. Megy, B. Overduin, Bethan Pritchard, Daniel Rios, Magali Ruffier, Michael Schuster, G. Slater, D. Smedley, Giulietta Spudich, Y. A. Tang, S. Trevanion, Albert J. Vilella, J. Vogel, S. White, S. Wilder, A. Zadissa, E. Birney, Fiona Cunningham, I. Dunham, R. Durbin, X. M. Fernández-Suárez, Javier Herrero, T. Hubbard, Anne Parker, G. Proctor, James A. Smith, S. Searle
8 2009
8
🐜
🐜 Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome.
77 auth. E. Margulies, G. Cooper, G. Asimenos, D. Thomas, Colin N. Dewey, A. Siepel, E. Birney, Damian Keefe, Ariel S. Schwartz, Minmei Hou, James Taylor, S. Nikolaev, J. Montoya-Burgos, A. Löytynoja, S. Whelan, ... F. Pardi, Tim Massingham, James B. Brown, P. Bickel, I. Holmes, J. Mullikin, A. Ureta-Vidal, B. Paten, Eric A. Stone, K. Rosenbloom, W. Kent, G. Bouffard, Xiaobin Guan, Nancy F. Hansen, J. Idol, V. Maduro, Baishali Maskeri, Jennifer C Mcdowell, Morgan Park, Pamela J. Thomas, Alice C. Young, R. Blakesley, D. Muzny, E. Sodergren, D. Wheeler, K. Worley, Huaiyang Jiang, G. Weinstock, R. Gibbs, T. Graves, R. Fulton, E. Mardis, R. Wilson, M. Clamp, James A. Cuff, S. Gnerre, D. Jaffe, Jean L. Chang, K. Lindblad-Toh, E. Lander, A. Hinrichs, Heather Trumbower, H. Clawson, A. Zweig, R. Kuhn, G. Barber, R. Harte, D. Karolchik, M. Field, Richard A. Moore, Carrie A. Matthewson, J. Schein, M. Marra, S. Antonarakis, S. Batzoglou, N. Goldman, R. Hardison, D. Haussler, W. Miller, L. Pachter, E. Green, A. Sidow
7 2007
7
🐜
🦁 Detecting Amino Acid Sites Under Positive Selection and Purifying Selection
Tim Massingham, N. Goldman
7 2005
7
🦁
🐢 Genomic DNA k-mer spectra: models and modalities
B. Chor, D. Horn, N. Goldman, Yaron Levy, Tim Massingham
7 2009
7
🐢
🐬 PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Botond Sipos, Tim Massingham, Gregory E. Jordan, N. Goldman
5 2011
5
🐬
🐬 More on the Best Evolutionary Rate for Phylogenetic Analysis
S. Klopfstein, Tim Massingham, N. Goldman
5 2017
5
🐬
🦁 Analysing gene function after duplication.
Tim Massingham, L. Davies, Pietro Liò
5 2001
5
🦁
🐬 Experimental design criteria in phylogenetics: where to add taxa.
K. Geuten, Tim Massingham, P. Darius, E. Smets, N. Goldman
5 2007
5
🐬
🐜 Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins
7 auth. Shiri Freilich, Tim Massingham, Sumit Bhattacharyya, Hannes Ponstingl, Paul A Lyons, Tom C. Freeman, ... Janet M Thornton
5 2005
5
🐜
🐬 Experimental design in caecilian systematics: phylogenetic information of mitochondrial genomes and nuclear rag1.
Diego San Mauro, D. Gower, Tim Massingham, M. Wilkinson, R. Zardoya, J. Cotton
4 2009
4
🐬
🐜 Determination and validation of principal gene products
11 auth. M. Tress, J. Wesselink, A. Frankish, Gonzalo López, N. Goldman, A. Löytynoja, ... Tim Massingham, F. Pardi, S. Whelan, J. Harrow, A. Valencia
4 2008
4
🐜