π
|
RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
22 auth.
P. Kapranov,
Jill Cheng,
S. Dike,
D. Nix,
R. Duttagupta,
A. Willingham,
P. Stadler,
Jana Hertel,
J. HackermΓΌller,
I. Hofacker,
...
I. Bell,
E. Cheung,
J. Drenkow,
E. Dumais,
Sandeep Patel,
G. Helt,
M. Ganesh,
Srinka Ghosh,
A. Piccolboni,
V. Sementchenko,
H. Tammana,
T. Gingeras
|
11 |
2007 |
11 π
|
π
|
The ENCODE (ENCyclopedia Of DNA Elements) Project
197 auth.
E. Feingold,
P. Good,
M. Guyer,
S. Kamholz,
L. Liefer,
K. Wetterstrand,
F. Collins,
T. Gingeras,
D. Kampa,
E. Sekinger,
Jill Cheng,
H. Hirsch,
Srinka Ghosh,
Z. Zhu,
Sandeep Patel,
...
A. Piccolboni,
A. Yang,
H. Tammana,
S. Bekiranov,
P. Kapranov,
R. Harrison,
G. Church,
K. Struhl,
B. Ren,
Tae Hoon Kim,
Leah Barrera,
Chunxu Qu,
S. V. Calcar,
R. Luna,
C. Glass,
M. Rosenfeld,
R. GuigΓ³,
S. Antonarakis,
E. Birney,
M. Brent,
L. Pachter,
A. Reymond,
E. Dermitzakis,
Colin N. Dewey,
Damian Keefe,
F. Denoeud,
Julien Lagarde,
J. Ashurst,
T. Hubbard,
J. Wesselink,
R. Castelo,
E. Eyras,
R. Myers,
A. Sidow,
S. Batzoglou,
N. Trinklein,
S. Hartman,
S. F. Aldred,
Elizabeth Anton,
D. I. Schroeder,
S. Marticke,
Leann Nguyen,
J. Schmutz,
J. Grimwood,
M. Dickson,
G. Cooper,
Eric A. Stone,
G. Asimenos,
M. Brudno,
Anindya Dutta,
N. Karnani,
Christopher M. Taylor,
H. K. Kim,
G. Robins,
G. Stamatoyannopoulos,
J. Stamatoyannopoulos,
M. Dorschner,
P. Sabo,
M. Hawrylycz,
R. Humbert,
J. Wallace,
Min Yu,
P. Navas,
M. McArthur,
William Stafford Noble,
I. Dunham,
Christof Koch,
R. Andrews,
Gayle K. Clelland,
S. Wilcox,
J. Fowler,
K. James,
Paul T. Groth,
O. Dovey,
P. Ellis,
Vicki L. Wraight,
A. Mungall,
P. Dhami,
H. Fiegler,
C. Langford,
N. Carter,
D. Vetrie,
M. Snyder,
G. Euskirchen,
A. Urban,
Ugrappa Nagalakshmi,
J. Rinn,
George V. Popescu,
Paul Bertone,
S. Hartman,
J. Rozowsky,
O. Emanuelsson,
Thomas E. Royce,
Sambath Chung,
M. Gerstein,
Zheng Lian,
Jin Lian,
Y. Nakayama,
S. Weissman,
V. Ε tolc,
W. Tongprasit,
H. Sethi,
Steven J. M. Jones,
M. Marra,
H. Shin,
J. Schein,
M. Clamp,
K. Lindblad-Toh,
Jean L. Chang,
D. Jaffe,
Michael Kamal,
E. Lander,
T. Mikkelsen,
J. Vinson,
M. Zody,
P. Jong,
K. Osoegawa,
M. Nefedov,
B. Zhu,
A. D. Baxevanis,
T. Wolfsberg,
G. Crawford,
J. Whittle,
I. Holt,
T. Vasicek,
D. Zhou,
S. Luo,
E. Green,
G. Bouffard,
E. Margulies,
M. Portnoy,
Nancy F. Hansen,
Pamela J. Thomas,
Jennifer C Mcdowell,
Baishali Maskeri,
Alice C. Young,
J. Idol,
R. Blakesley,
G. Schuler,
W. Miller,
R. Hardison,
L. Elnitski,
P. Shah,
S. Salzberg,
M. PerΘea,
William H. Majoros,
D. Haussler,
D. Thomas,
K. Rosenbloom,
H. Clawson,
A. Siepel,
W. Kent,
Z. Weng,
S. Jin,
Anason S. Halees,
H. Burden,
U. Karaoz,
Yutao Fu,
Yong Yu,
Chunming Ding,
C. Cantor,
R. Kingston,
J. Dennis,
Roland Green,
Michael A. Singer,
T. Richmond,
J. Norton,
P. Farnham,
M. Oberley,
D. Inman,
M. McCormick,
H. Kim,
C. Middle,
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Y. S. Kwon,
Z. Ye,
J. Dekker,
T. Tabuchi,
N. Gheldof,
J. Dostie,
S. Harvey
|
11 |
2004 |
11 π
|
π
|
Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution
19 auth.
Jill Cheng,
P. Kapranov,
J. Drenkow,
S. Dike,
Shane A. Brubaker,
Sandeep Patel,
J. Long,
D. Stern,
H. Tammana,
G. Helt,
...
V. Sementchenko,
A. Piccolboni,
S. Bekiranov,
D. Bailey,
M. Ganesh,
Srinka Ghosh,
I. Bell,
D. Gerhard,
T. Gingeras
|
10 |
2005 |
10 π
|
π
|
Unbiased Mapping of Transcription Factor Binding Sites along Human Chromosomes 21 and 22 Points to Widespread Regulation of Noncoding RNAs
20 auth.
S. Cawley,
S. Bekiranov,
H. Ng,
P. Kapranov,
E. Sekinger,
D. Kampa,
A. Piccolboni,
V. Sementchenko,
Jill Cheng,
A. J. Williams,
...
R. Wheeler,
Brant Wong,
J. Drenkow,
M. Yamanaka,
Sandeep Patel,
Shane A. Brubaker,
H. Tammana,
G. Helt,
K. Struhl,
T. Gingeras
|
10 |
2004 |
10 π
|
π
|
Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22.
12 auth.
D. Kampa,
Jill Cheng,
P. Kapranov,
M. Yamanaka,
Shane A. Brubaker,
S. Cawley,
...
J. Drenkow,
A. Piccolboni,
S. Bekiranov,
G. Helt,
H. Tammana,
T. Gingeras
|
9 |
2004 |
9 π
|
π¬
|
On the Complexity of Protein Folding
P. Crescenzi,
Deborah Goldman,
C. Papadimitriou,
A. Piccolboni,
M. Yannakakis
|
8 |
1998 |
8 π¬
|
π
|
Biological function of unannotated transcription during the early development of Drosophila melanogaster
11 auth.
J. Manak,
S. Dike,
V. Sementchenko,
P. Kapranov,
F. Biemar,
J. Long,
...
Jill Cheng,
I. Bell,
Srinka Ghosh,
A. Piccolboni,
T. Gingeras
|
7 |
2006 |
7 π
|
π¬
|
On the complexity of protein folding (extended abstract)
P. Crescenzi,
Deborah Goldman,
C. Papadimitriou,
A. Piccolboni,
M. Yannakakis
|
5 |
1998 |
5 π¬
|
π¦
|
Application of Evolutionary Algorithms to Protein Folding Prediction
A. Piccolboni,
G. Mauri
|
5 |
1997 |
5 π¦
|
π’
|
Approximation algorithms for protein folding prediction
G. Mauri,
G. Pavesi,
A. Piccolboni
|
5 |
1999 |
5 π’
|
π¦
|
On the Complexity of Fundamental Computational Problems in Pedigree Analysis
A. Piccolboni,
D. Gusfield
|
5 |
2003 |
5 π¦
|
π¬
|
On the complexity of protein folding (abstract)
P. Crescenzi,
Deborah Goldman,
C. Papadimitriou,
A. Piccolboni,
M. Yannakakis
|
4 |
1998 |
4 π¬
|
π¬
|
Algorithmic strategies in combinatorial chemistry
Deborah Goldman,
S. Istrail,
G. Lancia,
A. Piccolboni,
B. Walenz
|
4 |
2000 |
4 π¬
|