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Defining the core Arabidopsis thaliana root microbiome
16 auth.
Derek S. Lundberg,
Sarah L. Lebeis,
S. Paredes,
Scott M. Yourstone,
Jase Gehring,
S. Malfatti,
J. Tremblay,
A. Engelbrektson,
V. Kunin,
T. Rio,
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Robert C. Edgar,
T. Eickhorst,
R. Ley,
P. Hugenholtz,
S. Tringe,
J. Dangl
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11 |
2012 |
11
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Plant–microbiome interactions: from community assembly to plant health
P. Trivedi,
J. Leach,
S. Tringe,
T. Sa,
B. Singh
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10 |
2020 |
10
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Comparative Metagenomics of Microbial Communities
13 auth.
S. Tringe,
C. von Mering,
A. Kobayashi,
A. Salamov,
Kevin Y. Chen,
H-W Chang,
M. Podar,
J. Short,
E. Mathur,
J. Detter,
...
P. Bork,
P. Hugenholtz,
E. Rubin
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10 |
2004 |
10
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
54 auth.
R. M. Bowers,
N. Kyrpides,
R. Stepanauskas,
Miranda Harmon-Smith,
Devin F R Doud,
T. Reddy,
Frederik Schulz,
J. Jarett,
A. Rivers,
E. Eloe-Fadrosh,
S. Tringe,
Natalia N. Ivanova,
A. Copeland,
Alicia Clum,
Eric D. Becraft,
...
R. Malmstrom,
B. Birren,
M. Podar,
P. Bork,
G. Weinstock,
G. Garrity,
J. Dodsworth,
Shibu Yooseph,
G. Sutton,
F. O. Gloeckner,
J. Gilbert,
W. Nelson,
S. Hallam,
S. Jungbluth,
Thijs J. G. Ettema,
S. Tighe,
K. Konstantinidis,
Wen-Tso Liu,
B. Baker,
T. Rattei,
J. Eisen,
B. Hedlund,
K. McMahon,
N. Fierer,
R. Knight,
R. Finn,
G. Cochrane,
I. Karsch-Mizrachi,
G. Tyson,
Christian Rinke,
A. Lapidus,
Folker Meyer,
Pelin Yilmaz,
Donovan H. Parks,
A. M. Eren,
L. Schriml,
J. Banfield,
P. Hugenholtz,
T. Woyke
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10 |
2017 |
10
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Diversity and heritability of the maize rhizosphere microbiome under field conditions
8 auth.
Jason Peiffer,
A. Spor,
O. Koren,
Zhao Jin,
S. Tringe,
J. Dangl,
...
E. Buckler,
R. Ley
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10 |
2013 |
10
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
39 auth.
F. Warnecke,
P. Luginbühl,
Natalia N. Ivanova,
M. Ghassemian,
T. Richardson,
J. Stege,
M. Cayouette,
A. Mchardy,
G. Djordjevic,
N. Aboushadi,
R. Sorek,
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M. Podar,
H. Martín,
V. Kunin,
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D. Dalevi,
J. Madejska,
Edward Kirton,
D. Platt,
E. Szeto,
A. Salamov,
K. Barry,
N. Mikhailova,
N. Kyrpides,
E. Matson,
Elizabeth A. Ottesen,
Xinning Zhang,
Myriam Hernández,
C. Murillo,
L. G. Acosta,
I. Rigoutsos,
G. Tamayo,
B. Green,
Cathy H. C. Chang,
E. Rubin,
E. Mathur,
D. Robertson,
P. Hugenholtz,
J. Leadbetter
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10 |
2007 |
10
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
17 auth.
M. Hess,
A. Sczyrba,
R. Egan,
Tae-Wan Kim,
Harshal A. Chokhawala,
G. Schroth,
Shujun J Luo,
D. Clark,
Feng Chen,
Zhang Tao,
...
R. Mackie,
L. Pennacchio,
S. Tringe,
A. Visel,
T. Woyke,
Zhong Wang,
E. Rubin
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10 |
2011 |
10
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Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
7 auth.
Christian M. K. Sieber,
Alexander J. Probst,
A. Sharrar,
B. Thomas,
M. Hess,
S. Tringe,
...
J. Banfield
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10 |
2017 |
10
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Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
11 auth.
Sarah L. Lebeis,
S. Paredes,
Derek S. Lundberg,
N. Breakfield,
Jase Gehring,
Meredith McDonald,
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S. Malfatti,
Tijana Glavina del Rio,
Corbin D. Jones,
S. Tringe,
J. Dangl
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9 |
2015 |
9
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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
Maggie R. Wagner,
Derek S. Lundberg,
Tijana Del Rio,
S. Tringe,
J. Dangl,
T. Mitchell-Olds
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9 |
2016 |
9
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Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
10 auth.
Devin Coleman-Derr,
D. Desgarennes,
Citlali Fonseca-García,
Stephen Gross,
S. Clingenpeel,
T. Woyke,
...
G. North,
A. Visel,
L. Partida-Martínez,
S. Tringe
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9 |
2015 |
9
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
Yu-Wei Wu,
Yung-Hsu Tang,
S. Tringe,
B. Simmons,
S. Singer
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9 |
2014 |
9
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Metagenomics: DNA sequencing of environmental samples
S. Tringe,
E. Rubin
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9 |
2005 |
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A genomic catalog of Earth’s microbiomes
267 auth.
Stephen Nayfach,
S. Roux,
Rekha Seshadri,
Daniel W. Udwary,
N. Varghese,
Frederik Schulz,
Dongying Wu,
David Páez-Espino,
I. Chen,
Marcel Huntemann,
Krishna Palaniappan,
J. Ladau,
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T. Reddy,
T. Nielsen,
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Edward Kirton,
José P. Faria,
Janaka N. Edirisinghe,
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Viridiana Avila-Magaña,
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H. Beller,
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T. Berry,
Anthony D. Bertagnolli,
S. Bertilsson,
Jennifer M. Bhatnagar,
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Sara E. Blumer-Schuette,
B. Bohannan,
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A. Campbell,
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P. Constant,
Jonathan M. Conway,
W. M. Mac Cormack,
S. Crowe,
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C. Currie,
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Kristen M. DeAngelis,
Vincent J. Denef,
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H. Dionisi,
J. Dodsworth,
Nina Dombrowski,
Timothy Donohue,
Mark Dopson,
Timothy P. Driscoll,
P. Dunfield,
C. Dupont,
Katherine A. Dynarski,
V. Edgcomb,
E. Edwards,
M. Elshahed,
Israel Figueroa,
Beverly E. Flood,
Nathaniel W. Fortney,
Caroline S. Fortunato,
C. Francis,
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M. C. Gazitúa,
T. Gentry,
L. Gerwick,
Javad Gharechahi,
P. Girguis,
J. Gladden,
M. Gradoville,
S. Grasby,
Kelly Gravuer,
C. Grettenberger,
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B. Hausmann,
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M. Lozada,
B. MacGregor,
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D. Sumner,
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M. Tekere,
A. Teske,
T. Thomas,
C. Thrash,
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J. VanderGheynst,
T. Verbeke,
John Vollmers,
A. Vuillemin,
N. Waldo,
D. Walsh,
B. Weimer,
T. Whitman,
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B. Woodcroft,
Jamie Woolet,
K. Wrighton,
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N. Youssef,
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N. Kyrpides,
E. Eloe-Fadrosh
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9 |
2020 |
9
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