J. Morris's Profile

Role	Title	Level	Year	L/R
🐜	STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets 12 auth. Damian Szklarczyk, Annika L. Gable, D. Lyon, Alexander Junge, S. Wyder, J. Huerta-Cepas, ... M. Simonovic, N. Doncheva, J. Morris, P. Bork, L. Jensen, C. V. Mering	13	2018	13 🐜
🐜	The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible 12 auth. Damian Szklarczyk, J. Morris, H. Cook, Michael Kuhn, S. Wyder, M. Simonovic, ... Alberto Santos, N. Doncheva, Alexander C. J. Roth, P. Bork, L. Jensen, C. V. Mering	12	2016	12 🐜
🐜	UCSF ChimeraX: Structure visualization for researchers, educators, and developers 8 auth. E. Pettersen, Thomas D. Goddard, Conrad C. Huang, E. Meng, Gregory S. Couch, T. Croll, ... J. Morris, T. Ferrin	12	2020	12 🐜
🐜	UCSF ChimeraX: Meeting modern challenges in visualization and analysis 7 auth. Thomas D. Goddard, Conrad C. Huang, E. Meng, E. Pettersen, Gregory S. Couch, J. Morris, ... T. Ferrin	11	2018	11 🐜
🐜	Integration of biological networks and gene expression data using Cytoscape 32 auth. M. Cline, M. Smoot, E. Cerami, A. Kuchinsky, Nerius Landys, C. Workman, R. Christmas, Iliana Avila-Campilo, Michael L. Creech, Benjamin E. Gross, K. Hanspers, Ruth Isserlin, Ryan M. Kelley, S. Killcoyne, Samad Lotia, ... Steven Maere, J. Morris, K. Ono, Vuk Pavlovic, Alexander R. Pico, A. Vailaya, Peng-Liang Wang, Annette Adler, B. Conklin, L. Hood, Martin Kuiper, C. Sander, Ilya Schmulevich, Benno Schwikowski, G. Warner, T. Ideker, Gary D Bader	11	2007	11 🐜
🐬	Cytoscape stringApp: Network analysis and visualization of proteomics data N. Doncheva, J. Morris, J. Gorodkin, L. Jensen	10	2018	10 🐬
🐬	Cytoscape Automation: empowering workflow-based network analysis D. Otasek, J. Morris, Jorge Bouças, Alexander R. Pico, Barry Demchak	10	2019	10 🐬
🐬	Biological Network Exploration with Cytoscape 3 Gang Su, J. Morris, Barry Demchak, Gary D Bader	9	2014	9 🐬
🐜	Global landscape of HIV–human protein complexes 37 auth. S. Jäger, Peter Cimermancic, N. Gulbahce, Jeffrey R. Johnson, K. McGovern, S. Clarke, M. Shales, Gaelle Mercenne, L. Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, E. Akiva, John Marlett, ... M. Stephens, Iván D’Orso, Jason D. Fernandes, M. E. Fahey, Cathal S. Mahon, A. O’Donoghue, A. Todorovic, J. Morris, D. Maltby, T. Alber, G. Cagney, F. Bushman, John A. Young, S. Chanda, W. Sundquist, T. Kortemme, Ryan D. Hernandez, C. Craik, A. Burlingame, A. Sali, A. Frankel, N. Krogan	9	2011	9 🐜
🦁	clusterMaker: a multi-algorithm clustering plugin for Cytoscape 8 auth. J. Morris, Leonard Apeltsin, Aaron M. Newman, J. Baumbach, T. Wittkop, Gang Su, ... Gary D Bader, T. Ferrin	9	2011	9 🦁
🐬	Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies H. J. Atkinson, J. Morris, T. Ferrin, P. Babbitt	8	2009	8 🐬
🐜	The Structure–Function Linkage Database 19 auth. E. Akiva, Shoshana D. Brown, D. Almonacid, Alan E. Barber, Ashley F. Custer, Michael A. Hicks, Conrad C. Huang, Florian Lauck, S. T. Mashiyama, E. Meng, ... David Mischel, J. Morris, S. Ojha, A. Schnoes, D. Stryke, Jeffrey M. Yunes, T. Ferrin, Gemma L. Holliday, P. Babbitt	7	2013	7 🐜
🦁	Affinity purification–mass spectrometry and network analysis to understand protein-protein interactions 7 auth. J. Morris, G. Knudsen, E. Verschueren, Jeffrey R. Johnson, Peter Cimermancic, A. Greninger, ... Alexander R. Pico	7	2014	7 🦁
🐜	Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database. 10 auth. S. Pegg, Shoshana D. Brown, S. Ojha, J. Seffernick, E. Meng, J. Morris, ... Patricia J. Chang, Conrad C. Huang, T. Ferrin, P. Babbitt	7	2006	7 🐜
🐬	Enhancing UCSF Chimera through web services Conrad C. Huang, E. Meng, J. Morris, E. Pettersen, T. Ferrin	7	2014	7 🐬