|
🐢
|
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
12 auth.
Damian Szklarczyk,
Annika L. Gable,
D. Lyon,
Alexander Junge,
S. Wyder,
J. Huerta-Cepas,
...
M. Simonovic,
N. Doncheva,
J. Morris,
P. Bork,
L. Jensen,
C. V. Mering
|
13 |
2018 |
13
🐢
|
|
🐢
|
STRING v10: protein–protein interaction networks, integrated over the tree of life
14 auth.
Damian Szklarczyk,
Andrea Franceschini,
S. Wyder,
K. Forslund,
Davide Heller,
J. Huerta-Cepas,
M. Simonovic,
Alexander C. J. Roth,
Alberto Santos,
K. Tsafou,
...
Michael Kuhn,
P. Bork,
L. Jensen,
C. V. Mering
|
13 |
2014 |
13
🐢
|
|
🐢
|
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
12 auth.
Damian Szklarczyk,
J. Morris,
H. Cook,
Michael Kuhn,
S. Wyder,
M. Simonovic,
...
Alberto Santos,
N. Doncheva,
Alexander C. J. Roth,
P. Bork,
L. Jensen,
C. V. Mering
|
12 |
2016 |
12
🐢
|
|
🐢
|
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
12 auth.
Damian Szklarczyk,
Annika L. Gable,
Katerina C. Nastou,
D. Lyon,
Rebecca Kirsch,
S. Pyysalo,
...
N. Doncheva,
M. Legeay,
Tao Fang,
P. Bork,
L. Jensen,
C. V. Mering
|
12 |
2020 |
12
🐢
|
|
🐜
|
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
11 auth.
Andrea Franceschini,
Damian Szklarczyk,
Sune Pletscher-Frankild,
Michael Kuhn,
M. Simonovic,
Alexander C. J. Roth,
...
Jianyi Lin,
Pablo Minguez,
P. Bork,
C. V. Mering,
L. Jensen
|
12 |
2012 |
12
🐜
|
|
🐢
|
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
12 auth.
Damian Szklarczyk,
Andrea Franceschini,
Michael Kuhn,
M. Simonovic,
Alexander C. J. Roth,
Pablo Minguez,
...
T. Doerks,
M. Stark,
J. Muller,
P. Bork,
L. Jensen,
C. V. Mering
|
11 |
2010 |
11
🐢
|
|
🐢
|
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
13 auth.
Damian Szklarczyk,
Rebecca Kirsch,
Mikaela Koutrouli,
Katerina C. Nastou,
Farrokh Mehryary,
Radja Hachilif,
Annika L. Gable,
Tao Fang,
N. Doncheva,
S. Pyysalo,
...
P. Bork,
L. Jensen,
C. V. Mering
|
11 |
2022 |
11
🐢
|
|
🐜
|
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
12 auth.
J. Huerta-Cepas,
Damian Szklarczyk,
Davide Heller,
Ana Hernández-Plaza,
Sofia K. Forslund,
H. Cook,
...
D. Mende,
Ivica Letunic,
T. Rattei,
L. Jensen,
C. V. Mering,
P. Bork
|
11 |
2018 |
11
🐜
|
|
🐜
|
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
175 auth.
L. Hillier,
W. Miller,
E. Birney,
W. Warren,
R. Hardison,
C. Ponting,
P. Bork,
D. Burt,
M. Groenen,
M. Delany,
J. Dodgson,
A. Chinwalla,
P. Cliften,
S. Clifton,
K. Delehaunty,
...
C. Fronick,
R. Fulton,
T. Graves,
Colin L. Kremitzki,
Daniel Layman,
V. Magrini,
J. McPherson,
T. Miner,
P. Minx,
W. Nash,
M. Nhan,
J. Nelson,
Lachlan Oddy,
C. Pohl,
Jennifer Randall-Maher,
Scott M. Smith,
J. Wallis,
Shiaw-Pyng Yang,
Michael N Romanov,
C. Rondelli,
Bob Paton,
Jacqueline Smith,
D. Morrice,
Laura M. Daniels,
H. Tempest,
L. Robertson,
J. Masabanda,
D. Griffin,
A. Vignal,
V. Fillon,
L. Jacobbson,
S. Kerje,
L. Andersson,
R. Crooijmans,
J. Aerts,
J. J. Poel,
H. Ellegren,
R. B. Caldwell,
S. Hubbard,
D. Grafham,
A. Kierzek,
Stuart Mclaren,
I. Overton,
H. Arakawa,
K. Beattie,
Yuri Bezzubov,
Paul E. Boardman,
J. Bonfield,
M. Croning,
R. Davies,
M. Francis,
S. Humphray,
C. Scott,
Ruth Taylor,
C. Tickle,
W. Brown,
J. Rogers,
J. Buerstedde,
Stuart A. Wilson,
L. Stubbs,
I. Ovcharenko,
L. Gordon,
S. Lucas,
Marcia M. Miller,
H. Inoko,
T. Shiina,
J. Kaufman,
J. Salomonsen,
K. Skjoedt,
G. Wong,
Jun Wang,
Bin Liu,
Jian Wang,
Jun Yu,
Huanming Yang,
M. Nefedov,
M. Koriabine,
P. Dejong,
L. Goodstadt,
C. Webber,
N. Dickens,
Ivica Letunic,
M. Suyama,
D. Torrents,
C. V. Mering,
E. Zdobnov,
K. Makova,
A. Nekrutenko,
L. Elnitski,
P. Eswara,
D. King,
Shan Yang,
S. Tyekucheva,
Anusha Radakrishnan,
Robert S. Harris,
Francesca Chiaromonte,
James Taylor,
Jianbin He,
M. Rijnkels,
S. Griffiths-Jones,
A. Ureta-Vidal,
M. M. Hoffman,
Jessica Severin,
S. Searle,
A. Law,
D. Speed,
D. Waddington,
Ze Cheng,
Eray Tüzün,
E. Eichler,
Z. Bao,
P. Flicek,
David D. Shteynberg,
M. Brent,
J. Bye,
E. Huckle,
Sourav Chatterji,
Colin N. Dewey,
L. Pachter,
A. Kouranov,
Z. Mourelatos,
A. Hatzigeorgiou,
A. Paterson,
R. Ivarie,
Mikael Brandström,
Erik Axelsson,
N. Backström,
S. Berlin,
M. Webster,
O. Pourquié,
A. Reymond,
C. Ucla,
S. Antonarakis,
M. Long,
J. Emerson,
E. Betrán,
I. Dupanloup,
H. Kaessmann,
A. Hinrichs,
G. Bejerano,
T. Furey,
R. Harte,
B. Raney,
A. Siepel,
W. Kent,
D. Haussler,
E. Eyras,
R. Castelo,
J. F. Abril,
S. Castellano,
F. Camara,
Genís Parra,
R. Guigó,
G. Bourque,
G. Tesler,
P. Pevzner,
A. Smit,
L. Fulton,
E. Mardis,
R. Wilson
|
11 |
2004 |
11
🐜
|
|
🐢
|
STRING 8—a global view on proteins and their functional interactions in 630 organisms
12 auth.
L. Jensen,
Michael Kuhn,
M. Stark,
Samuel Chaffron,
C. Creevey,
J. Muller,
...
T. Doerks,
P. Julien,
Alexander C. J. Roth,
M. Simonovic,
P. Bork,
C. V. Mering
|
11 |
2008 |
11
🐢
|
|
🦁
|
Comparative assessment of large-scale data sets of protein–protein interactions
7 auth.
C. V. Mering,
R. Krause,
B. Snel,
M. Cornell,
S. Oliver,
S. Fields,
...
P. Bork
|
11 |
2002 |
11
🦁
|
|
🦁
|
STRING: a database of predicted functional associations between proteins
C. V. Mering,
M. Huynen,
Daniel Jaeggi,
Steffen Schmidt,
P. Bork,
B. Snel
|
11 |
2003 |
11
🦁
|
|
🐜
|
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
13 auth.
J. Huerta-Cepas,
Damian Szklarczyk,
K. Forslund,
H. Cook,
Davide Heller,
M. Walter,
T. Rattei,
D. Mende,
S. Sunagawa,
Michael Kuhn,
...
L. Jensen,
C. V. Mering,
P. Bork
|
10 |
2015 |
10
🐜
|
|
🦁
|
STRING: known and predicted protein–protein associations, integrated and transferred across organisms
9 auth.
C. V. Mering,
L. Jensen,
B. Snel,
S. Hooper,
M. Krupp,
Mathilde Foglierini,
...
Nelly Jouffre,
M. Huynen,
P. Bork
|
10 |
2004 |
10
🦁
|
|
🐬
|
STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data
Damian Szklarczyk,
Alberto Santos,
C. V. Mering,
L. Jensen,
P. Bork,
Michael Kuhn
|
10 |
2015 |
10
🐬
|
