🐬
|
Cytoscape stringApp: Network analysis and visualization of proteomics data
N. Doncheva,
J. Morris,
J. Gorodkin,
L. Jensen
|
10 |
2018 |
10 🐬
|
🐜
|
Analyses of pig genomes provide insight into porcine demography and evolution
136 auth.
M. Groenen,
A. Archibald,
H. Uenishi,
C. Tuggle,
Y. Takeuchi,
M. Rothschild,
C. Rogel-Gaillard,
Chankyu Park,
D. Milan,
H. Megens,
Shengting Li,
D. Larkin,
Heebal Kim,
Laurent A. F. Frantz,
M. Cáccamo,
...
Hyeonju Ahn,
Bronwen L. Aken,
A. Anselmo,
Christian Anthon,
L. Auvil,
B. Badaoui,
C. Beattie,
C. Bendixen,
Daniel Berman,
F. Blecha,
J. Blomberg,
L. Bolund,
M. Bosse,
S. Botti,
Zhan Bujie,
Megan Bystrom,
Boris Capitanu,
D. Carvalho-Silva,
P. Chardon,
Celine Chen,
R. Cheng,
Sang-Haeng Choi,
W. Chow,
R. Clark,
C. Clee,
R. Crooijmans,
H. Dawson,
P. Déhais,
Fioravante De Sapio,
B. Dibbits,
N. Drou,
Z. Du,
K. Eversole,
J. Fadista,
S. Fairley,
T. Faraut,
G. Faulkner,
K. Fowler,
M. Fredholm,
E. Fritz,
J. Gilbert,
E. Giuffra,
J. Gorodkin,
D. Griffin,
J. Harrow,
Alexander Hayward,
K. Howe,
Zhi-Liang Hu,
S. Humphray,
T. Hunt,
H. Hornshøj,
J. Jeon,
P. Jern,
Matthew C. Jones,
J. Jurka,
H. Kanamori,
R. Kapetanovic,
Jaebum Kim,
Jae-hwan Kim,
Kyu-Won Kim,
Tae-Hun Kim,
G. Larson,
Kyooyeol Lee,
Kyung-Tai Lee,
R. Leggett,
H. Lewin,
Yingrui Li,
Wansheng Liu,
J. Loveland,
Yao Lu,
J. Lunney,
Jian Ma,
O. Madsen,
Katherine M Mann,
L. Matthews,
Stuart Mclaren,
T. Morozumi,
M. Murtaugh,
Jitendra Narayan,
Dinh Truong Nguyen,
Peixiang Ni,
S. Oh,
S. Onteru,
F. Panitz,
E. Park,
Hong-Seog Park,
G. Pascal,
Yogesh Paudel,
M. Pérez-Enciso,
R. Ramirez-Gonzalez,
J. Reecy,
S. Rodriguez-Zas,
G. Rohrer,
L. Rund,
Y. Sang,
K. Schachtschneider,
J. Schraiber,
J. Schwartz,
L. Scobie,
C. Scott,
S. Searle,
B. Servin,
B. Southey,
G. Sperber,
P. Stadler,
J. Sweedler,
Hakim Tafer,
B. Thomsen,
R. Wali,
Jian Wang,
Jun Wang,
S. White,
Xun Xu,
M. Yerle,
Guojie Zhang,
Jianguo Zhang,
Jie Zhang,
Shuhong Zhao,
J. Rogers,
C. Churcher,
L. Schook
|
10 |
2012 |
10 🐜
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🐜
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Human polymorphism at microRNAs and microRNA target sites.
169 auth.
Liuqing Yang,
Chunru Lin,
Chunyu Jin,
Joy C Yang,
Bogdan Tanasa,
Wenbo Li,
Daria Merkurjev,
K. Ohgi,
Jie Zhang,
C. Evans,
M. Rosenfeld,
Charles E. Vejnar,
Matthias Blum,
E. Zdobnov,
A. Turchinovich,
...
T. Samatov,
A. Tonevitsky,
B. Burwinkel,
G. Schett,
D. Elewaut,
I. McInnes,
J. Dayer,
M. Neurath,
S. Pundhir,
J. Gorodkin,
F. Olivieri,
M. R. Rippo,
A. Procopio,
F. Fazioli,
L. Jeker,
Xuyu Zhou,
R. Blelloch,
J. Bluestone,
C. Guay,
R. Regazzi,
R. Gandhi,
B. Healy,
T. Gholipour,
S. Egorova,
A. Musallam,
M. Hussain,
Parham Nejad,
B. Patel,
Hillary Hei,
S. Khoury,
F. Quintana,
P. Kivisakk,
T. Chitnis,
H. Weiner,
Yun Deng,
Jian Zhao,
D. Sakurai,
K. Kaufman,
J. Edberg,
R. Kimberly,
D. Kamen,
G. Gilkeson,
C. Jacob,
R. Scofield,
C. Langefeld,
J. Kelly,
R. Ramsey‐Goldman,
M. Petri,
J. Reveille,
L. Vilá,
G. Alarcón,
T. Vyse,
B. Pons-Estel,
B. Freedman,
P. Gaffney,
K. Sivils,
J. James,
P. Gregersen,
J. Anaya,
T. Niewold,
J. Merrill,
L. Criswell,
A. Stevens,
S. Boackle,
R. Cantor,
Weiling Chen,
J. M. Grossman,
B. Hahn,
J. Harley,
M. E. Alarcόn-Riquelme,
E. Brown,
B. Tsao,
Susan B. Carpenter,
Maninjay K. Atianand,
D. Aiello,
Emiliano P. Ricci,
Pallavi Gandhi,
Lisa L. Hall,
M. Byron,
Brian G. Monks,
Meabh Henry-Bezy,
J. Lawrence,
L. O’Neill,
M. Moore,
Daniel R. Caffrey,
K. Fitzgerald,
Dan-xia Zhu,
L. Fan,
R. Lu,
Cheng Fang,
Wenyi Shen,
Zhi-jian Zou,
Yin-Hua Wang,
Hua-yuan Zhu,
K. Miao,
Peng Liu,
W. Xu,
Jian-yong Li,
Jing Gong,
Yin Tong,
Hong-Mei Zhang,
Kai Wang,
Tao Hu,
G. Shan,
Jun Sun,
An-Yuan Guo,
V. Davalos,
C. Moutinho,
A. Villanueva,
R. Boqué,
P. Silva,
F. Carneiro,
M. Esteller,
R. S. Huang,
E. Gamazon,
Dana Ziliak,
Yujia Wen,
H. Im,
Wei Zhang,
C. Wing,
S. Duan,
W. Bleibel,
N. Cox,
M. Dolan,
P. Brest,
Pierre Lapaquette,
Mouloud Souidi,
K. Lebrigand,
Annabelle Cesaro,
V. Vouret-Craviari,
B. Mari,
P. Barbry,
J. Mosnier,
X. Hébuterne,
A. Harel-Bellan,
B. Mograbi,
A. Darfeuille‐Michaud,
P. Hofman,
J. Marchini,
Bryan N. Howie,
L. Hindorff,
P. Sethupathy,
Heather Junkins,
E. Ramos,
Jayashri P. Mehta,
F. Collins,
T. Manolio,
W. Cookson,
L. Liang,
G. Abecasis,
M. Moffatt,
M. Lathrop,
M. A. Saunders,
Handong Liang
|
9 |
2013 |
9 🐜
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🦁
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Comparing two K-category assignments by a K-category correlation coefficient
J. Gorodkin
|
8 |
2004 |
8 🦁
|
🐜
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Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing
22 auth.
Rasmus Wernersson,
M. Schierup,
F. G. Jørgensen,
J. Gorodkin,
F. Panitz,
H. Stærfeldt,
O. F. Christensen,
T. Mailund,
H. Hornshøj,
Ami Klein,
...
Jun Wang,
Bin Liu,
Songnian Hu,
Wei Dong,
G. K. Wong,
Jun Yu,
Jian Wang,
C. Bendixen,
M. Fredholm,
S. Brunak,
Huanming Yang,
L. Bolund
|
8 |
2005 |
8 🐜
|
🦁
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Finding the most significant common sequence and structure motifs in a set of RNA sequences.
J. Gorodkin,
Laurie J. Heyer,
G. Stormo
|
7 |
1997 |
7 🦁
|
🐜
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RNAcentral: a hub of information for non-coding RNA sequences
61 auth.
B. Sweeney,
Anton I. Petrov,
Boris Burkov,
R. Finn,
A. Bateman,
M. Szymanski,
W. Karłowski,
J. Gorodkin,
S. Seemann,
J. Cannone,
Robin Gutell,
P. Fey,
S. Basu,
Simon Kay,
G. Cochrane,
...
Kostantinos Billis,
D. Emmert,
Steven J. Marygold,
R. Huntley,
R. Lovering,
A. Frankish,
Patricia P. Chan,
T. Lowe,
E. Bruford,
Ruth L. Seal,
J. Vandesompele,
P. Volders,
M. Paraskevopoulou,
Lina Ma,
Zhang Zhang,
S. Griffiths-Jones,
J. Bujnicki,
Pietro Boccaletto,
J. Blake,
C. Bult,
Runsheng Chen,
Yi Zhao,
V. Wood,
Kim M Rutherford,
Elena Rivas,
J. Cole,
S. Laulederkind,
M. Shimoyama,
M. Gillespie,
M. Orlic-Milacic,
Ioanna Kalvari,
Eric P. Nawrocki,
S. Engel,
J. Cherry,
Silva Team,
T. Berardini,
A. Hatzigeorgiou,
D. Karagkouni,
K. Howe,
Paul Davis,
M. Dinger,
Shunmin He,
M. Yoshihama,
N. Kenmochi,
P. Stadler,
K. Williams
|
7 |
2018 |
7 🐜
|
🐜
|
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases
46 auth.
B. Sweeney,
Anton I. Petrov,
C. E. Ribas,
R. Finn,
A. Bateman,
M. Szymanski,
W. Karłowski,
S. Seemann,
J. Gorodkin,
J. Cannone,
Robin Gutell,
Simon Kay,
Steven J. Marygold,
G. D. Santos,
A. Frankish,
...
Jonathan M. Mudge,
Ruth Barshir,
Simon Fishilevich,
Patricia P. Chan,
T. Lowe,
Ruth L. Seal,
E. Bruford,
S. Panni,
P. Porras,
D. Karagkouni,
A. Hatzigeorgiou,
Lina Ma,
Zhang Zhang,
P. Volders,
P. Mestdagh,
S. Griffiths-Jones,
Bastian Fromm,
K. Peterson,
Ioanna Kalvari,
Eric P. Nawrocki,
A. Petrov,
S. Weng,
Philia Bouchard-Bourelle,
Michelle S. Scott,
L. Lui,
D. Hoksza,
R. Lovering,
B. Kramarz,
Prita Mani,
S. Ramachandran,
Z. Weinberg
|
7 |
2020 |
7 🐜
|
🐬
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Profiling of ribose methylations in RNA by high-throughput sequencing.
Ulf Birkedal,
Mikkel Christensen-Dalsgaard,
Nicolai Krogh,
R. Sabarinathan,
J. Gorodkin,
H. Nielsen
|
7 |
2014 |
7 🐬
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🐢
|
Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure.
Elfar Torarinsson,
M. Sawera,
J. Havgaard,
M. Fredholm,
J. Gorodkin
|
7 |
2006 |
7 🐢
|
🦁
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Displaying the information contents of structural RNA alignments: the structure logos
J. Gorodkin,
Laurie J. Heyer,
S. Brunak,
G. Stormo
|
7 |
1997 |
7 🦁
|
🐬
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Protein-driven inference of miRNA–disease associations
Søren Mørk,
Sune Pletscher-Frankild,
A. Pallejà,
J. Gorodkin,
L. Jensen
|
7 |
2013 |
7 🐬
|