π
|
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
17 auth.
David Warde-Farley,
S. Donaldson,
Ovi Comes,
K. Zuberi,
Rashad Badrawi,
P. Chao,
M. Franz,
Chris Grouios,
Farzana Kazi,
C. Lopes,
...
Anson Maitland,
S. Mostafavi,
J. Montojo,
Quentin Shao,
George Wright,
Gary D Bader,
Q. Morris
|
11 |
2010 |
11 π
|
π
|
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
46 auth.
Y. Ho,
A. Gruhler,
Adrian Heilbut,
Gary D Bader,
L. Moore,
S. Adams,
A. Millar,
Paul Taylor,
K. Bennett,
K. Boutilier,
Lingyun Yang,
Cheryl Wolting,
I. Donaldson,
SΓΈren Schandorff,
Juanita Shewnarane,
...
M. VΓ΅,
Joanne Taggart,
Marilyn Goudreault,
B. Muskat,
C. Alfarano,
D. Dewar,
Zhen-Liang Lin,
K. Michalickova,
A. Willems,
Holly E. Sassi,
P. A. Nielsen,
K. J. Rasmussen,
J. Andersen,
L. Johansen,
L. H. Hansen,
H. Jespersen,
A. Podtelejnikov,
E. Nielsen,
Janne Crawford,
Vibeke Poulsen,
B. D. SΓΈrensen,
Jesper Matthiesen,
Ronald C. Hendrickson,
F. Gleeson,
T. Pawson,
M. Moran,
D. Durocher,
M. Mann,
C. Hogue,
D. Figeys,
M. Tyers
|
11 |
2002 |
11 π
|
π’
|
Integration of biological networks and gene expression data using Cytoscape
32 auth.
M. Cline,
M. Smoot,
E. Cerami,
A. Kuchinsky,
Nerius Landys,
C. Workman,
R. Christmas,
Iliana Avila-Campilo,
Michael L. Creech,
Benjamin E. Gross,
K. Hanspers,
Ruth Isserlin,
Ryan M. Kelley,
S. Killcoyne,
Samad Lotia,
...
Steven Maere,
J. Morris,
K. Ono,
Vuk Pavlovic,
Alexander R. Pico,
A. Vailaya,
Peng-Liang Wang,
Annette Adler,
B. Conklin,
L. Hood,
Martin Kuiper,
C. Sander,
Ilya Schmulevich,
Benno Schwikowski,
G. Warner,
T. Ideker,
Gary D Bader
|
11 |
2007 |
11 π’
|
π
|
Systematic Genetic Analysis with Ordered Arrays of Yeast Deletion Mutants
13 auth.
A. Tong,
M. Evangelista,
A. Parsons,
H. Xu,
Gary D Bader,
N. PageΜ,
M. Robinson,
S. Raghibizadeh,
C. Hogue,
H. Bussey,
...
B. Andrews,
M. Tyers,
C. Boone
|
11 |
2001 |
11 π
|
π
|
The Genetic Landscape of a Cell
53 auth.
M. Costanzo,
A. Baryshnikova,
J. Bellay,
Yungil Kim,
Eric D. Spear,
C. Sevier,
Huiming Ding,
Judice L. Y. Koh,
Kiana Toufighi,
S. Mostafavi,
Jeany Prinz,
Robert P. St. Onge,
Benjamin VanderSluis,
Taras Makhnevych,
Franco J. Vizeacoumar,
...
Solmaz Alizadeh,
S. Bahr,
RenΓ©e L. Brost,
Yiqun Chen,
Murat Cokol,
R. Deshpande,
Zhijian Li,
Zhen-Yuan Lin,
Wendy Liang,
M. MΓ₯rback,
Jadine Paw,
Bryan-Joseph San Luis,
Ermira Shuteriqi,
A. Tong,
Nydia van Dyk,
Iain M. Wallace,
J. Whitney,
M. Weirauch,
Guoqing Zhong,
Hongwei Zhu,
W. Houry,
M. Brudno,
Sasan Ragibizadeh,
BalΓ‘zs Papp,
Csaba PΓ‘l,
F. Roth,
G. Giaever,
C. Nislow,
O. Troyanskaya,
H. Bussey,
Gary D Bader,
A. Gingras,
Q. Morris,
Philip M. Kim,
C. Kaiser,
C. Myers,
B. Andrews,
Charles Boone
|
11 |
2010 |
11 π
|
π
|
Global Mapping of the Yeast Genetic Interaction Network
50 auth.
A. Tong,
G. Lesage,
Gary D Bader,
Huiming Ding,
Hong Xu,
Xiaofeng Xin,
J. Young,
G. Berriz,
RenΓ©e L. Brost,
Michael Chang,
Yiqun Chen,
X. Cheng,
G. Chua,
H. Friesen,
D. Goldberg,
...
J. Haynes,
Christine Humphries,
Grace He,
Shamiza Hussein,
Lizhu Ke,
N. Krogan,
Zhijian Li,
J. Levinson,
Hong Lu,
Patrice MΓ©nard,
Christella Munyana,
A. Parsons,
Owen W. Ryan,
Raffi Tonikian,
T. Roberts,
A. Sdicu,
Jesse Shapiro,
Bilal Sheikh,
B. Suter,
Sharyl L. Wong,
Lan V. Zhang,
Hongwei Zhu,
C. Burd,
S. Munro,
C. Sander,
J. Rine,
J. Greenblatt,
M. Peter,
A. Bretscher,
G. Bell,
F. Roth,
Grant W. Brown,
B. Andrews,
H. Bussey,
Charles Boone
|
11 |
2004 |
11 π
|
π
|
A draft map of the human proteome
72 auth.
Min-Sik Kim,
S. Pinto,
D. Getnet,
R. Nirujogi,
Srikanth S. Manda,
Raghothama Chaerkady,
Anil K. Madugundu,
Dhanashree S. Kelkar,
Ruth Isserlin,
Shobhit Jain,
J. K. Thomas,
Babylakshmi Muthusamy,
Pamela Leal-Rojas,
Praveen Kumar,
Nandini A. Sahasrabuddhe,
...
Lavanya Balakrishnan,
Jayshree Advani,
B. George,
S. Renuse,
L. D. N. Selvan,
Arun H. Patil,
Vishalakshi Nanjappa,
A. Radhakrishnan,
Samarjeet Prasad,
Tejaswini Subbannayya,
Rajesh Raju,
Manish Kumar,
S. Sreenivasamurthy,
Arivusudar Marimuthu,
G. Sathe,
S. Chavan,
K. Datta,
Yashwanth Subbannayya,
A. Sahu,
S. Yelamanchi,
Savita Jayaram,
Pavithra Rajagopalan,
Jyoti Sharma,
K. Murthy,
Nazia Syed,
R. Goel,
A. Khan,
Sartaj Ahmad,
Gourav Dey,
K. Mudgal,
Aditi Chatterjee,
TaiβChung Huang,
Jun Zhong,
Xinyan Wu,
Patrick G. Shaw,
Donald Freed,
M. S. Zahari,
K. Mukherjee,
S. Shankar,
A. Mahadevan,
Henry H. N. Lam,
Christopher J. Mitchell,
S. Shankar,
P. Satishchandra,
J. Schroeder,
R. Sirdeshmukh,
A. Maitra,
S. Leach,
C. Drake,
M. Halushka,
T. Prasad,
R. Hruban,
C. Kerr,
Gary D Bader,
C. Iacobuzio-Donahue,
H. Gowda,
A. Pandey
|
11 |
2014 |
11 π
|
π
|
International network of cancer genome projects
260 auth.
T. Hudson,
W. Anderson,
Axel Artez,
A. Barker,
C. Bell,
R. BernabΓ©,
M. Bhan,
F. Calvo,
I. Eerola,
D. Gerhard,
A. Guttmacher,
M. Guyer,
F. Hemsley,
Jennifer L. Jennings,
D. Kerr,
...
P. Klatt,
Patrik Kolar,
Jun Kusada,
D. Lane,
F. Laplace,
Lu Youyong,
G. Nettekoven,
B. Ozenberger,
Jane L. Peterson,
T. S. Rao,
J. Remacle,
A. J. Schafer,
T. Shibata,
M. Stratton,
J. Vockley,
Koichi Watanabe,
Huanming Yang,
M. Yuen,
B. Knoppers,
M. Bobrow,
A. Cambon-Thomsen,
L. Dressler,
S. Dyke,
Y. Joly,
Kazuto Kato,
Karen L Kennedy,
Pilar NicolΓ s,
M. J. Parker,
E. RialβSebbag,
C. Romeo-Casabona,
K. Shaw,
S. Wallace,
G. Wiesner,
N. Zeps,
P. Lichter,
A. Biankin,
C. Chabannon,
L. Chin,
B. Clement,
E. de Γlava,
F. Degos,
M. Ferguson,
Peter Geary,
D. Hayes,
A. Johns,
A. Kasprzyk,
H. Nakagawa,
R. Penny,
M. Piris,
R. Sarin,
A. Scarpa,
M. J. van de Vijver,
P. Futreal,
H. Aburatani,
M. BayΓ©s,
David D L Botwell,
P. Campbell,
X. Estivill,
S. Grimmond,
I. Gut,
M. Hirst,
C. LΓ³pez-OtΓn,
P. Majumder,
M. Marra,
J. McPherson,
Z. Ning,
X. Puente,
Y. Ruan,
H. Stunnenberg,
H. Swerdlow,
V. Velculescu,
R. Wilson,
H. Xue,
Liu Yang,
P. Spellman,
Gary D Bader,
P. Boutros,
Paul Flicek,
G. Getz,
R. GuigΓ³,
Guangwu Guo,
D. Haussler,
S. Heath,
T. Hubbard,
T. Jiang,
Steven J. M. Jones,
Qibin Li,
N. LΓ³pez-Bigas,
Ruibang Luo,
L. Muthuswamy,
B. F. Ouellette,
J. Pearson,
V. Quesada,
Benjamin J. Raphael,
C. Sander,
T. Speed,
Lincoln D. Stein,
Joshua M. Stuart,
J. Teague,
Y. Totoki,
T. Tsunoda,
A. Valencia,
D. Wheeler,
Honglong Wu,
Shancen Zhao,
Guangyu Zhou,
M. Lathrop,
G. Thomas,
Teruhiko Yoshida,
M. Axton,
C. Gunter,
L. Miller,
Junjun Zhang,
Syed Haider,
Jianxin Wang,
C. Yung,
A. Cros,
Yong Liang,
S. Gnaneshan,
J. Guberman,
J. Hsu,
D. Chalmers,
K. Hasel,
T. Kaan,
W. Lowrance,
T. Masui,
L. Rodriguez,
C. Vergely,
D. Bowtell,
N. Cloonan,
A. Defazio,
J. Eshleman,
D. Etemadmoghadam,
B. Gardiner,
J. Kench,
R. Sutherland,
M. Tempero,
N. Waddell,
P. J. Wilson,
S. Gallinger,
M. Tsao,
P. Shaw,
G. Petersen,
D. Mukhopadhyay,
R. DePinho,
S. Thayer,
K. Shazand,
Timothy A Beck,
M. Sam,
Lee E. Timms,
Vanessa Ballin,
Youyong Lu,
J. Ji,
Xiuqing Zhang,
Feng Chen,
Xueda Hu,
Qi Yang,
G. Tian,
Lianhai Zhang,
Xiaofang Xing,
Xianghong Li,
Zhengβgang Zhu,
Yingyan Yu,
Jun Yu,
J. Tost,
P. Brennan,
I. Holcatova,
D. Zaridze,
A. Brazma,
L. Egevard,
E. Prokhortchouk,
R. Banks,
M. UhlΓ©n,
Juris Viksna,
F. PontΓ©n,
K. Skryabin,
E. Birney,
Γ
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A. BΓΈrresen-Dale,
C. Caldas,
J. Foekens,
Sancha Martin,
J. Reis-Filho,
A. Richardson,
C. Sotiriou,
G. Thoms,
L. V. vanβt Veer,
D. Birnbaum,
H. BlanchΓ©,
Pascal Boucher,
S. Boyault,
Jocelyne D Masson-Jacquemier,
I. PauportΓ©,
X. Pivot,
A. Vincent-Salomon,
E. Tabone,
C. Theillet,
I. Treilleux,
P. Bioulac-Sage,
T. Decaens,
D. Franco,
M. Gut,
Didier Samuel,
J. ZucmanβRossi,
R. Eils,
B. Brors,
J. Korbel,
A. Korshunov,
P. Landgraf,
H. Lehrach,
S. Pfister,
B. Radlwimmer,
G. Reifenberger,
Michael D. Taylor,
C. von Kalle,
P. Majumder,
P. Pederzoli,
R. Lawlor,
M. Delledonne,
A. Bardelli,
T. Gress,
D. Klimstra,
G. Zamboni,
Y. Nakamura,
S. Miyano,
Akihiro Fujimoto,
E. Campo,
S. de SanjosΓ©,
E. Montserrat,
M. GonzΓ‘lez-DΓaz,
P. Jares,
H. Himmelbauer,
S. BeΓ‘,
S. Aparicio,
D. Easton,
F. Collins,
C. Compton,
E. Lander,
W. Burke,
A. Green,
S. Hamilton,
O. Kallioniemi,
T. Ley,
E. Liu,
B. Wainwright
|
10 |
2010 |
10 π
|
π’
|
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
D. Merico,
Ruth Isserlin,
Oliver Stueker,
A. Emili,
Gary D Bader
|
10 |
2010 |
10 π’
|
π
|
Functional impact of global rare copy number variation in autism spectrum disorders
176 auth.
D. Pinto,
A. Pagnamenta,
L. Klei,
R. Anney,
D. Merico,
R. Regan,
J. Conroy,
T. MagalhΓ£es,
C. Correia,
B. Abrahams,
J. Almeida,
E. Bacchelli,
Gary D Bader,
A. Bailey,
G. Baird,
...
A. Battaglia,
T. Berney,
N. Bolshakova,
S. BΓΆlte,
P. Bolton,
T. Bourgeron,
Sean Brennan,
J. Brian,
S. Bryson,
A. Carson,
G. Casallo,
J. Casey,
B. Chung,
L. Cochrane,
Christina M. Corsello,
Emily L. Crawford,
Andrew Crossett,
C. Cytrynbaum,
G. Dawson,
M. Jonge,
R. Delorme,
Irene Drmic,
E. Duketis,
F. Duque,
A. Estes,
Penny Farrar,
B. Fernandez,
S. Folstein,
E. Fombonne,
C. Freitag,
J. Gilbert,
C. Gillberg,
J. Glessner,
J. Goldberg,
A. Green,
Jonathan Green,
Stephen J. Guter,
H. Hakonarson,
E. Heron,
M. Hill,
R. Holt,
J. Howe,
G. Hughes,
Vanessa Hus,
R. Igliozzi,
Cecilia Kim,
S. Klauck,
A. Kolevzon,
Olena Korvatska,
Vlad Kustanovich,
C. Lajonchere,
J. Lamb,
Magdalena Laskawiec,
M. Leboyer,
A. Couteur,
B. Leventhal,
A. C. Lionel,
Xiao-qing Liu,
C. Lord,
L. Lotspeich,
Sabata C. Lund,
E. Maestrini,
W. Mahoney,
Carine Mantoulan,
C. Marshall,
H. McConachie,
C. McDougle,
J. McGrath,
W. McMahon,
Alison K. Merikangas,
O. Migita,
N. Minshew,
G. Mirza,
J. Munson,
S. Nelson,
Carolyn Noakes,
A. Noor,
G. Nygren,
G. Oliveira,
K. Papanikolaou,
J. Parr,
B. Parrini,
T. Paton,
A. Pickles,
M. Pilorge,
J. Piven,
C. Ponting,
D. Posey,
A. Poustka,
F. Poustka,
Aparna Prasad,
J. Ragoussis,
Katy Renshaw,
Jessica Rickaby,
W. Roberts,
K. Roeder,
B. RogΓ©,
M. Rutter,
L. Bierut,
J. Rice,
Jeff Salt,
K. Sansom,
Daisuke Sato,
R. Segurado,
A. Sequeira,
Lili Senman,
N. Shah,
V. Sheffield,
L. Soorya,
I. Sousa,
O. Stein,
N. Sykes,
Vera Stoppioni,
Christina P Strawbridge,
R. Tancredi,
K. Tansey,
Bhooma Thiruvahindrapduram,
A. Thompson,
Susanne A. Thomson,
A. Tryfon,
J. Tsiantis,
H. Engeland,
J. Vincent,
F. Volkmar,
S. Wallace,
Kai Wang,
Zhouzhi Wang,
T. Wassink,
C. Webber,
R. Weksberg,
Kirsty Wing,
Kerstin Wittemeyer,
Shawn Wood,
B. Yaspan,
Danielle M Zurawiecki,
L. Zwaigenbaum,
J. Buxbaum,
R. Cantor,
E. Cook,
H. Coon,
M. Cuccaro,
B. Devlin,
S. Ennis,
L. Gallagher,
D. Geschwind,
M. Gill,
J. Haines,
Joachim Hallmayer,
Judith S Miller,
A. Monaco,
J. Nurnberger,
A. Paterson,
M. Pericak-Vance,
G. Schellenberg,
P. Szatmari,
A. Vicente,
V. Vieland,
E. Wijsman,
S. Scherer,
J. Sutcliffe,
C. Betancur
|
10 |
2010 |
10 π
|
π
|
A travel guide to Cytoscape plugins
9 auth.
Rintaro Saito,
M. Smoot,
K. Ono,
Johannes Ruscheinski,
Peng-Liang Wang,
Samad Lotia,
...
Alexander R. Pico,
Gary D Bader,
T. Ideker
|
10 |
2012 |
10 π
|
π’
|
Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap
12 auth.
J. Reimand,
Ruth Isserlin,
V. Voisin,
Mike Kucera,
Christian Tannus-Lopes,
Asha Rostamianfar,
...
Lina Wadi,
Mona Meyer,
Jeff Wong,
Changjiang Xu,
D. Merico,
Gary D Bader
|
10 |
2019 |
10 π’
|
π
|
The reactome pathway knowledgebase 2022
35 auth.
M. Gillespie,
B. Jassal,
Ralf Stephan,
Marija Milacic,
K. Rothfels,
A. Senff-Ribeiro,
J. Griss,
Cristoffer Sevilla,
L. Matthews,
Chuqiao Gong,
Chuan Deng,
Thawfeek M. Varusai,
E. Ragueneau,
Yusra Haider,
Bruce May,
...
V. Shamovsky,
Joel Weiser,
Timothy Brunson,
N. Sanati,
Liam Beckman,
Xiang Shao,
A. Fabregat,
K. Sidiropoulos,
Julieth Murillo,
Guilherme Viteri,
Justin Cook,
Solomon Shorser,
Gary D Bader,
E. Demir,
C. Sander,
R. Haw,
Guanming Wu,
L. Stein,
H. Hermjakob,
P. DβEustachio
|
10 |
2021 |
10 π
|
π¦
|
BIND: the Biomolecular Interaction Network Database
Gary D Bader,
I. Donaldson,
Cheryl Wolting,
B. F. Ouellette,
T. Pawson,
C. Hogue
|
10 |
2003 |
10 π¦
|