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🐜
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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
83 auth.
Francisco J. Pardo-Palacios,
Dingjie Wang,
Fairlie Reese,
M. Diekhans,
Sílvia Carbonell-Sala,
B. Williams,
J. Loveland,
M. De María,
Matthew Adams,
Gabriela Balderrama-Gutierrez,
A. Behera,
J. Gonzalez,
T. Hunt,
Julien Lagarde,
Cindy E Liang,
...
Haoran Li,
M. J. Meade,
D. Amador,
A. Prjibelski,
I. Birol,
H. Bostan,
As Brooks,
M. H. Çelik,
Ying Chen,
Meihong Du,
Colette Felton,
Jonathan Göke,
Saber Hafezqorani,
R. Herwig,
H. Kawaji,
Joseph Lee,
Jian-liang Li,
M. Lienhard,
Alla Mikheenko,
Dennis Mulligan,
K. Nip,
M. Perțea,
Matthew E. Ritchie,
Andre Sim,
Alison D. Tang,
Y. Wan,
Changqing Wang,
Brandon Y Wong,
Chen Yang,
If H. A. Barnes,
Andrew E. Berry,
S. Capella,
N. Dhillon,
J. M. Fernandez-Gonzalez,
Luis Ferrández-Peral,
N. Garcia-Reyero,
Stefan M. M. Goetz,
C. Hernández-Ferrer,
L. Kondratova,
Tianyuan Liu,
Alessandra Martinez-Martin,
C. Menor,
Jorge Mestre-Tomás,
Jonathan M. Mudge,
Nedka G Panayotova,
Alejandro Paniagua,
Dmitry Repchevsky,
E. Rouchka,
Brandon Saint-John,
Enrique Sapena,
L. Sheynkman,
M. Smith,
M. Suner,
Hazuki Takahashi,
Ingrid Youngworth,
Piero Carninci,
N. Denslow,
R. Guigó,
Margaret E. Hunter,
Hagen U. Tilgner,
B. Wold,
Christopher Vollmers,
A. Frankish,
K. Au,
Gloria M. Sheynkman,
A. Mortazavi,
A. Conesa,
Angela N. Brooks
|
5 |
2023 |
5
🐜
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|
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A comprehensive study of a 29 capsid AAV library in non-human primate central nervous system.
12 auth.
O. Kondratov,
L. Kondratova,
R. J. Mandell,
K. Coleman,
M. Savage,
H. Gray-Edwards,
...
T. Ness,
E. Rodríguez-Lebrón,
R. D. Bell,
J. Rabinowitz,
Paul D. Gamlin,
S. Zolotukhin
|
5 |
2021 |
5
🐜
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|
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SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms
12 auth.
Francisco J. Pardo-Palacios,
Ángeles Arzalluz-Luque,
L. Kondratova,
Pedro Salguero,
Jorge Mestre-Tomás,
Rocío Amorín,
...
Eva Estevan-Morió,
Tianyuan Liu,
Adalena V. Nanni,
L. McIntyre,
Elizabeth Tseng,
A. Conesa
|
4 |
2023 |
4
🐜
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|
🐜
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A roadmap for the functional annotation of protein families: a community perspective
59 auth.
V. de Crécy-Lagard,
Rocio Amorin de Hegedus,
C. Arighi,
Jill Babor,
A. Bateman,
Ian K. Blaby,
Crysten E. Blaby-Haas,
A. Bridge,
S. Burley,
Stacey Cleveland,
Lucy J. Colwell,
A. Conesa,
Christian Dallago,
A. Danchin,
Anita de Waard,
...
A. Deutschbauer,
Raquel Dias,
Yousong Ding,
Gang Fang,
Iddo Friedberg,
J. Gerlt,
J. Goldford,
Mark G. Gorelik,
Benjamin M. Gyori,
C. Henry,
Geoffrey Hutinet,
Marshall Jaroch,
P. Karp,
L. Kondratova,
Zhiyong Lu,
Aron Marchler-Bauer,
M. Martin,
C. McWhite,
G. Moghe,
P. Monaghan,
A. Morgat,
C. Mungall,
D. Natale,
W. Nelson,
S. O’Donoghue,
C. Orengo,
K. O’Toole,
P. Radivojac,
Colbie J. Reed,
Richard J. Roberts,
D. Rodionov,
I. Rodionova,
J. Rudolf,
L. Saleh,
Gloria M. Sheynkman,
F. Thibaud-Nissen,
P. Thomas,
P. Uetz,
D. Vallenet,
Erica Carter,
P. Weigele,
V. Wood,
E. Wood-Charlson,
Jin Xu
|
4 |
2022 |
4
🐜
|
|
🐜
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SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms
12 auth.
Francisco J. Pardo-Palacios,
Ángeles Arzalluz-Luque,
L. Kondratova,
Pedro Salguero,
Jorge Mestre-Tomás,
Rocío Amorín,
...
Eva Estevan-Morió,
Tianyuan Liu,
Adalena V. Nanni,
Lauren M McIntyre,
Elizabeth Tseng,
Ana Conesa
|
4 |
2024 |
4
🐜
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|
🐜
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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
87 auth.
Francisco J. Pardo-Palacios,
Dingjie Wang,
Fairlie Reese,
M. Diekhans,
Sílvia Carbonell-Sala,
Brian A. Williams,
J. Loveland,
M. De María,
Matthew Adams,
Gabriela Balderrama-Gutierrez,
Amit K. Behera,
Jose M Gonzalez Martinez,
T. Hunt,
Julien Lagarde,
Cindy E Liang,
...
Haoran Li,
M. J. Meade,
David A Moraga Amador,
A. Prjibelski,
Inanҫ Birol,
Hamed Bostan,
Ashley M Brooks,
M. H. Çelik,
Ying Chen,
Meihong Du,
Colette Felton,
Jonathan Göke,
Saber Hafezqorani,
Ralf Herwig,
Hideya Kawaji,
Joseph Lee,
Jian-liang Li,
M. Lienhard,
Alla Mikheenko,
Dennis Mulligan,
K. Nip,
M. Perțea,
Matthew E. Ritchie,
Andre Sim,
Alison D. Tang,
Yuk Kei Wan,
Changqing Wang,
Brandon Y Wong,
Chen Yang,
If H. A. Barnes,
Andrew E. Berry,
S. Capella-Gutiérrez,
Alyssa Cousineau,
Namrita Dhillon,
J. M. Fernandez-Gonzalez,
Luis Ferrández-Peral,
Natàlia Garcia-Reyero,
Stefan Götz,
C. Hernández-Ferrer,
L. Kondratova,
Tianyuan Liu,
Alessandra Martinez-Martin,
C. Menor,
Jorge Mestre-Tomás,
Jonathan M. Mudge,
Nedka G Panayotova,
Alejandro Paniagua,
Dmitry Repchevsky,
Xingjie Ren,
Eric C Rouchka,
Brandon Saint-John,
Enrique Sapena,
L. Sheynkman,
Melissa L Smith,
M. Suner,
Hazuki Takahashi,
Ingrid Youngworth,
P. Carninci,
N. Denslow,
R. Guigó,
Margaret E. Hunter,
Rene Maehr,
Yin Shen,
Hagen U. Tilgner,
Barbara J. Wold,
Christopher Vollmers,
A. Frankish,
K. Au,
Gloria M. Sheynkman,
A. Mortazavi,
Ana Conesa,
Angela N. Brooks
|
4 |
2024 |
4
🐜
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|
🦁
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Removal of Endotoxin from rAAV Samples Using a Simple Detergent-Based Protocol
L. Kondratova,
O. Kondratov,
R. Ragheb,
S. Zolotukhin
|
4 |
2019 |
4
🦁
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