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Structure, Function and Diversity of the Healthy Human Microbiome
248 auth.
C. Huttenhower,
D. Gevers,
R. Knight,
Sahar Abubucker,
J. Badger,
A. Chinwalla,
H. Creasy,
A. Earl,
Michael G. Fitzgerald,
R. Fulton,
M. Giglio,
Kymberlie Hallsworth-Pepin,
E. Lobos,
R. Madupu,
V. Magrini,
...
John Martin,
M. Mitreva,
D. Muzny,
E. Sodergren,
J. Versalovic,
A. Wollam,
K. Worley,
J. Wortman,
Sarah K. Young,
Qiandong Zeng,
K. Aagaard,
Olukemi O. Abolude,
E. Allen-Vercoe,
E. Alm,
Lucia Alvarado,
G. Andersen,
S. Anderson,
Elizabeth L. Appelbaum,
H. Arachchi,
G. Armitage,
Cesar Arze,
T. Ayvaz,
Carl C. Baker,
L. Begg,
Tsegahiwot Belachew,
Veena Bhonagiri,
Monika Bihan,
M. Blaser,
Toby Bloom,
Vivien R. Bonazzi,
J. Brooks,
G. Buck,
C. Buhay,
D. Busam,
Joseph L. Campbell,
S. Canon,
B. Cantarel,
P. Chain,
I. Chen,
Lei Chen,
Shaila Chhibba,
Ken Chu,
Dawn M. Ciulla,
J. Clemente,
S. Clifton,
S. Conlan,
J. Crabtree,
M. Cutting,
Noam J. Davidovics,
Catherine C. Davis,
T. DeSantis,
C. Deal,
Kimberley D. Delehaunty,
F. Dewhirst,
E. Deych,
Yan Ding,
D. Dooling,
Shannon P. Dugan,
W. Dunne,
A. S. Durkin,
Robert C. Edgar,
R. Erlich,
Candace N. Farmer,
R. Farrell,
Karoline Faust,
M. Feldgarden,
Victor Felix,
Sheila A Fisher,
A. Fodor,
L. Forney,
Les Foster,
V. D. Francesco,
Jonathan Friedman,
Dennis C. Friedrich,
C. Fronick,
L. Fulton,
Hongyu Gao,
Nathalia Garcia,
G. Giannoukos,
C. Giblin,
Maria Y. Giovanni,
J. Goldberg,
Johannes Goll,
Antonio Gonzalez,
Allison D. Griggs,
Sharvari Gujja,
S. Haake,
B. Haas,
Holli A. Hamilton,
Emily L. Harris,
Theresa A. Hepburn,
Brandi N. Herter,
D. Hoffmann,
M. Holder,
Clinton Howarth,
Katherine H. Huang,
Susan M. Huse,
J. Izard,
J. Jansson,
Huaiyang Jiang,
Catherine Jordan,
Vandita Joshi,
J. Katancik,
W. Keitel,
S. Kelley,
C. Kells,
N. King,
D. Knights,
H. Kong,
O. Koren,
S. Koren,
Karthik Kota,
C. Kovar,
N. Kyrpides,
P. S. Rosa,
Sandy Lee,
K. P. Lemon,
N. Lennon,
Cecil M. Lewis,
L. Lewis,
R. Ley,
Kelvin Li,
K. Liolios,
Bo Liu,
Yue Liu,
C. Lo,
C. Lozupone,
R. Lunsford,
T. Madden,
A. Mahurkar,
P. Mannon,
E. Mardis,
V. Markowitz,
K. Mavromatis,
J. McCorrison,
Daniel McDonald,
J. Mcewen,
A. McGuire,
P. Mcinnes,
Teena Mehta,
K. Mihindukulasuriya,
J. Miller,
P. Minx,
I. Newsham,
C. Nusbaum,
M. O'Laughlin,
Joshua Orvis,
I. Pagani,
Krishna Palaniappan,
Shital M. Patel,
Matthew D. Pearson,
Jane L. Peterson,
M. Podar,
C. Pohl,
K. Pollard,
Mihai Pop,
M. Priest,
L. Proctor,
X. Qin,
J. Raes,
J. Ravel,
J. Reid,
Mina Rho,
R. Rhodes,
Kevin P. Riehle,
M. Rivera,
B. Rodriguez-Mueller,
Y. Rogers,
M. C. Ross,
C. Russ,
Ravi K. Sanka,
P. Sankar,
J. Sathirapongsasuti,
J. Schloss,
P. Schloss,
T. Schmidt,
M. Scholz,
L. Schriml,
Alyxandria M. Schubert,
N. Segata,
J. Segre,
W. Shannon,
R. Sharp,
T. Sharpton,
N. Shenoy,
N. Sheth,
Gina A. Simone,
Indresh Singh,
C. Smillie,
J. Sobel,
Daniel D. Sommer,
P. Spicer,
G. Sutton,
S. Sykes,
D. Tabbaa,
M. Thiagarajan,
Chad Tomlinson,
M. Torralba,
Todd J. Treangen,
R. Truty,
T. Vishnivetskaya,
Jason R. Walker,
Lu Wang,
Zhengyuan O. Wang,
D. Ward,
W. Warren,
M. Watson,
Christopher Wellington,
K. Wetterstrand,
J. White,
Katarzyna Wilczek-Boney,
Yuanqing Wu,
K. Wylie,
T. Wylie,
C. Yandava,
Liang Ye,
Yuzhen Ye,
Shibu Yooseph,
Bonnie P. Youmans,
Lan Zhang,
Yanjiao Zhou,
Yiming Zhu,
L. Zoloth,
Jeremy D. Zucker,
B. Birren,
R. Gibbs,
S. Highlander,
B. Methé,
K. Nelson,
J. Petrosino,
G. Weinstock,
R. Wilson,
O. White
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13 |
2012 |
13
🐜
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🐜
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A framework for human microbiome research
248 auth.
B. Methé,
K. Nelson,
Mihai Pop,
H. Creasy,
M. Giglio,
C. Huttenhower,
D. Gevers,
J. Petrosino,
Sahar Abubucker,
J. Badger,
A. Chinwalla,
A. Earl,
Michael G. Fitzgerald,
R. Fulton,
Kymberlie Hallsworth-Pepin,
...
E. Lobos,
R. Madupu,
V. Magrini,
John C. Martin,
M. Mitreva,
D. Muzny,
E. Sodergren,
J. Versalovic,
A. Wollam,
K. Worley,
J. Wortman,
Sarah K. Young,
Qiandong Zeng,
K. Aagaard,
Olukemi O. Abolude,
E. Allen-Vercoe,
E. Alm,
Lucia Alvarado,
G. Andersen,
S. Anderson,
Elizabeth L. Appelbaum,
H. Arachchi,
G. Armitage,
Cesar Arze,
T. Ayvaz,
Carl C. Baker,
L. Begg,
Tsegahiwot Belachew,
Veena Bhonagiri,
Monika Bihan,
M. Blaser,
Toby Bloom,
J. Vivien Bonazzi,
Paul Brooks,
G. Buck,
C. Buhay,
D. Busam,
Joseph L. Campbell,
S. Canon,
B. Cantarel,
P. Chain,
I. Chen,
Lei Chen,
Shaila Chhibba,
Ken Chu,
Dawn M. Ciulla,
J. Clemente,
S. Clifton,
S. Conlan,
J. Crabtree,
M. Cutting,
Noam J. Davidovics,
Catherine C. Davis,
T. DeSantis,
C. Deal,
Kimberley D. Delehaunty,
F. Dewhirst,
E. Deych,
Yan Ding,
D. Dooling,
Shannon P. Dugan,
W. Dunne,
A. S. Durkin,
Robert C. Edgar,
R. Erlich,
Candace N. Farmer,
R. Farrell,
Karoline Faust,
M. Feldgarden,
Victor Felix,
Sheila A Fisher,
A. Fodor,
L. Forney,
Les Foster,
V. Di Francesco,
Jonathan Friedman,
Dennis C. Friedrich,
C. Fronick,
L. Fulton,
Hongyu Gao,
Nathalia Garcia,
G. Giannoukos,
C. Giblin,
Maria Y. Giovanni,
J. Goldberg,
Johannes Goll,
Antonio Gonzalez,
Allison D. Griggs,
Sharvari Gujja,
B. Haas,
Holli A. Hamilton,
Emily L. Harris,
Theresa A. Hepburn,
Brandi N. Herter,
D. Hoffmann,
M. Holder,
Clinton Howarth,
Katherine H. Huang,
Susan M. Huse,
J. Izard,
J. Jansson,
Huaiyang Jiang,
Catherine Jordan,
Vandita Joshi,
J. Katancik,
W. Keitel,
S. Kelley,
C. Kells,
Susan Kinder-Haake,
N. King,
R. Knight,
D. Knights,
H. Kong,
O. Koren,
S. Koren,
Karthik Kota,
C. Kovar,
N. Kyrpides,
Patricio S. La Rosa,
Sandy Lee,
K. P. Lemon,
N. Lennon,
Cecil M. Lewis,
L. Lewis,
R. Ley,
Kelvin Li,
K. Liolios,
Bo Liu,
Yue Liu,
C. Lo,
C. Lozupone,
R. Lunsford,
T. Madden,
A. Mahurkar,
P. Mannon,
E. Mardis,
V. Markowitz,
K. Mavrommatis,
J. McCorrison,
Daniel McDonald,
J. Mcewen,
A. McGuire,
P. Mcinnes,
Teena Mehta,
K. Mihindukulasuriya,
J. Miller,
P. Minx,
I. Newsham,
C. Nusbaum,
M. O'Laughlin,
Joshua Orvis,
I. Pagani,
Krishna Palaniappan,
Shital M. Patel,
Matthew D. Pearson,
Jane L. Peterson,
M. Podar,
C. Pohl,
K. Pollard,
M. Priest,
L. Proctor,
X. Qin,
J. Raes,
J. Ravel,
J. Reid,
Mina Rho,
R. Rhodes,
Kevin P. Riehle,
M. Rivera,
B. Rodriguez-Mueller,
Y. Rogers,
M. C. Ross,
C. Russ,
Ravi K. Sanka,
J. Pamela Sankar,
Fah Sathirapongsasuti,
J. Schloss,
P. Schloss,
T. Schmidt,
M. Scholz,
L. Schriml,
Alyxandria M. Schubert,
N. Segata,
J. Segre,
W. Shannon,
R. Sharp,
T. Sharpton,
N. Shenoy,
N. Sheth,
Gina A. Simone,
Indresh Singh,
C. Smillie,
J. Sobel,
Daniel D. Sommer,
P. Spicer,
G. Sutton,
S. Sykes,
D. Tabbaa,
M. Thiagarajan,
Chad Tomlinson,
M. Torralba,
Todd J. Treangen,
R. Truty,
T. Vishnivetskaya,
Jason R. Walker,
Lu Wang,
Zhengyuan O. Wang,
D. Ward,
W. Warren,
M. Watson,
Christopher Wellington,
K. Wetterstrand,
J. White,
Katarzyna Wilczek-Boney,
Yuanqing Wu,
K. Wylie,
T. Wylie,
C. Yandava,
Liang Ye,
Yuzhen Ye,
Shibu Yooseph,
Bonnie P. Youmans,
Lan Zhang,
Yanjiao Zhou,
Yiming Zhu,
L. Zoloth,
Jeremy D. Zucker,
B. Birren,
R. Gibbs,
S. Highlander,
G. Weinstock,
R. Wilson,
O. White
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11 |
2012 |
11
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🦁
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.
M. Scholz,
C. Lo,
P. Chain
|
8 |
2012 |
8
🦁
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|
🐜
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Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage
12 auth.
J. Dodsworth,
P. Blainey,
S. Murugapiran,
W. Swingley,
Christian A. Ross,
S. Tringe,
...
P. Chain,
M. Scholz,
C. Lo,
J. Raymond,
S. Quake,
B. Hedlund
|
7 |
2013 |
7
🐜
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🐬
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Accurate read-based metagenome characterization using a hierarchical suite of unique signatures
Tracey Freitas,
Po-E Li,
M. Scholz,
P. Chain
|
7 |
2015 |
7
🐬
|
|
🐜
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Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk
22 auth.
R. O’Connor,
Jennifer M. Fung,
Koty H. Sharp,
J. Benner,
Colleen McClung,
Shelley Cushing,
Elizabeth R Lamkin,
A. Fomenkov,
B. Henrissat,
Y. Londer,
...
M. Scholz,
J. Posfai,
S. Malfatti,
S. Tringe,
T. Woyke,
R. Malmstrom,
Devin Coleman-Derr,
Marvin A. Altamia,
S. Dedrick,
Stefan T. Kaluziak,
M. Haygood,
D. Distel
|
6 |
2014 |
6
🐜
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|
🦁
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
M. Scholz,
C. Lo,
P. Chain
|
5 |
2014 |
5
🦁
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|
🐜
|
Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium
29 auth.
V. Khmelenina,
David A. C. Beck,
C. Munk,
K. Davenport,
H. Daligault,
T. Erkkila,
Lynne A. Goodwin,
W. Gu,
C. Lo,
M. Scholz,
H. Teshima,
Yan Xu,
P. Chain,
F. Bringel,
S. Vuilleumier,
...
A. DiSpirito,
P. Dunfield,
M. Jetten,
M. Klotz,
C. Knief,
J. Murrell,
H. O. D. Camp,
Y. Sakai,
J. Semrau,
M. Svenning,
L. Stein,
Y. Trotsenko,
Marina G. Kalyuzhnayad,
GK Skryabin
|
5 |
2013 |
5
🐜
|
|
🐜
|
Whole-Genome Assemblies of 56 Burkholderia Species
20 auth.
H. Daligault,
K. Davenport,
T. Minogue,
K. Bishop-Lilly,
S. Broomall,
D. Bruce,
P. Chain,
S. Coyne,
K. Frey,
H. Gibbons,
...
J. Jaissle,
G. Koroleva,
J. Ladner,
C. Lo,
C. Munk,
G. Palacios,
C. L. Redden,
C. N. Rosenzweig,
M. Scholz,
Shannon L. Johnson
|
4 |
2014 |
4
🐜
|
|
🐜
|
Draft Genome Assembly of Acinetobacter baumannii ATCC 19606
14 auth.
K. Davenport,
H. Daligault,
T. Minogue,
D. Bruce,
P. Chain,
S. Coyne,
J. Jaissle,
G. Koroleva,
J. Ladner,
Po-E Li,
...
G. Palacios,
M. Scholz,
H. Teshima,
Shannon L. Johnson
|
4 |
2014 |
4
🐜
|
|
🐜
|
Genome Assembly of Serratia marcescens Type Strain ATCC 13880
13 auth.
H. Daligault,
K. Davenport,
T. Minogue,
S. Broomall,
D. Bruce,
P. Chain,
S. Coyne,
H. Gibbons,
J. Jaissle,
C. N. Rosenzweig,
...
M. Scholz,
H. Teshima,
S. L. Johnson
|
4 |
2014 |
4
🐜
|
|
🐜
|
High-Quality Draft Genome Sequences of Four Lignocellulose-Degrading Bacteria Isolated from Puerto Rican Forest Soil: Gordonia sp., Paenibacillus sp., Variovorax sp., and Vogesella sp.
19 auth.
Hannah L. Woo,
Kristen M. DeAngelis,
H. Teshima,
K. Davenport,
H. Daligault,
T. Erkkila,
Lynne A. Goodwin,
W. Gu,
C. Lo,
C. Munk,
...
M. Scholz,
Yan Xu,
P. Chain,
D. Bruce,
C. Detter,
R. Tapia,
Cliff Han,
B. Simmons,
T. Hazen
|
4 |
2017 |
4
🐜
|
|
🐜
|
Complete Genome Sequence of Stenotrophomonas maltophilia Type Strain 810-2 (ATCC 13637)
13 auth.
Karen W. Davenport,
H. Daligault,
T. Minogue,
S. Broomall,
D. Bruce,
Patrick Chain,
S. Coyne,
H. Gibbons,
J. Jaissle,
Po-E Li,
...
C. N. Rosenzweig,
M. Scholz,
Shannon L. Johnson
|
3 |
2014 |
3
🐜
|
