BetterScholar BetterScholar
14
Role
Title
Level Year L/R
🐜 Structure, Function and Diversity of the Healthy Human Microbiome
248 auth. C. Huttenhower, D. Gevers, R. Knight, Sahar Abubucker, J. Badger, A. Chinwalla, H. Creasy, A. Earl, Michael G. Fitzgerald, R. Fulton, M. Giglio, Kymberlie Hallsworth-Pepin, E. Lobos, R. Madupu, V. Magrini, ... John Martin, M. Mitreva, D. Muzny, E. Sodergren, J. Versalovic, A. Wollam, K. Worley, J. Wortman, Sarah K. Young, Qiandong Zeng, K. Aagaard, Olukemi O. Abolude, E. Allen-Vercoe, E. Alm, Lucia Alvarado, G. Andersen, S. Anderson, Elizabeth L. Appelbaum, H. Arachchi, G. Armitage, Cesar Arze, T. Ayvaz, Carl C. Baker, L. Begg, Tsegahiwot Belachew, Veena Bhonagiri, Monika Bihan, M. Blaser, Toby Bloom, Vivien R. Bonazzi, J. Brooks, G. Buck, C. Buhay, D. Busam, Joseph L. Campbell, S. Canon, B. Cantarel, P. Chain, I. Chen, Lei Chen, Shaila Chhibba, Ken Chu, Dawn M. Ciulla, J. Clemente, S. Clifton, S. Conlan, J. Crabtree, M. Cutting, Noam J. Davidovics, Catherine C. Davis, T. DeSantis, C. Deal, Kimberley D. Delehaunty, F. Dewhirst, E. Deych, Yan Ding, D. Dooling, Shannon P. Dugan, W. Dunne, A. S. Durkin, Robert C. Edgar, R. Erlich, Candace N. Farmer, R. Farrell, Karoline Faust, M. Feldgarden, Victor Felix, Sheila A Fisher, A. Fodor, L. Forney, Les Foster, V. D. Francesco, Jonathan Friedman, Dennis C. Friedrich, C. Fronick, L. Fulton, Hongyu Gao, Nathalia Garcia, G. Giannoukos, C. Giblin, Maria Y. Giovanni, J. Goldberg, Johannes Goll, Antonio Gonzalez, Allison D. Griggs, Sharvari Gujja, S. Haake, B. Haas, Holli A. Hamilton, Emily L. Harris, Theresa A. Hepburn, Brandi N. Herter, D. Hoffmann, M. Holder, Clinton Howarth, Katherine H. Huang, Susan M. Huse, J. Izard, J. Jansson, Huaiyang Jiang, Catherine Jordan, Vandita Joshi, J. Katancik, W. Keitel, S. Kelley, C. Kells, N. King, D. Knights, H. Kong, O. Koren, S. Koren, Karthik Kota, C. Kovar, N. Kyrpides, P. S. Rosa, Sandy Lee, K. P. Lemon, N. Lennon, Cecil M. Lewis, L. Lewis, R. Ley, Kelvin Li, K. Liolios, Bo Liu, Yue Liu, C. Lo, C. Lozupone, R. Lunsford, T. Madden, A. Mahurkar, P. Mannon, E. Mardis, V. Markowitz, K. Mavromatis, J. McCorrison, Daniel McDonald, J. Mcewen, A. McGuire, P. Mcinnes, Teena Mehta, K. Mihindukulasuriya, J. Miller, P. Minx, I. Newsham, C. Nusbaum, M. O'Laughlin, Joshua Orvis, I. Pagani, Krishna Palaniappan, Shital M. Patel, Matthew D. Pearson, Jane L. Peterson, M. Podar, C. Pohl, K. Pollard, Mihai Pop, M. Priest, L. Proctor, X. Qin, J. Raes, J. Ravel, J. Reid, Mina Rho, R. Rhodes, Kevin P. Riehle, M. Rivera, B. Rodriguez-Mueller, Y. Rogers, M. C. Ross, C. Russ, Ravi K. Sanka, P. Sankar, J. Sathirapongsasuti, J. Schloss, P. Schloss, T. Schmidt, M. Scholz, L. Schriml, Alyxandria M. Schubert, N. Segata, J. Segre, W. Shannon, R. Sharp, T. Sharpton, N. Shenoy, N. Sheth, Gina A. Simone, Indresh Singh, C. Smillie, J. Sobel, Daniel D. Sommer, P. Spicer, G. Sutton, S. Sykes, D. Tabbaa, M. Thiagarajan, Chad Tomlinson, M. Torralba, Todd J. Treangen, R. Truty, T. Vishnivetskaya, Jason R. Walker, Lu Wang, Zhengyuan O. Wang, D. Ward, W. Warren, M. Watson, Christopher Wellington, K. Wetterstrand, J. White, Katarzyna Wilczek-Boney, Yuanqing Wu, K. Wylie, T. Wylie, C. Yandava, Liang Ye, Yuzhen Ye, Shibu Yooseph, Bonnie P. Youmans, Lan Zhang, Yanjiao Zhou, Yiming Zhu, L. Zoloth, Jeremy D. Zucker, B. Birren, R. Gibbs, S. Highlander, B. MethΓ©, K. Nelson, J. Petrosino, G. Weinstock, R. Wilson, O. White
13 2012
13
🐜
🐜 A framework for human microbiome research
248 auth. B. MethΓ©, K. Nelson, Mihai Pop, H. Creasy, M. Giglio, C. Huttenhower, D. Gevers, J. Petrosino, Sahar Abubucker, J. Badger, A. Chinwalla, A. Earl, Michael G. Fitzgerald, R. Fulton, Kymberlie Hallsworth-Pepin, ... E. Lobos, R. Madupu, V. Magrini, John C. Martin, M. Mitreva, D. Muzny, E. Sodergren, J. Versalovic, A. Wollam, K. Worley, J. Wortman, Sarah K. Young, Qiandong Zeng, K. Aagaard, Olukemi O. Abolude, E. Allen-Vercoe, E. Alm, Lucia Alvarado, G. Andersen, S. Anderson, Elizabeth L. Appelbaum, H. Arachchi, G. Armitage, Cesar Arze, T. Ayvaz, Carl C. Baker, L. Begg, Tsegahiwot Belachew, Veena Bhonagiri, Monika Bihan, M. Blaser, Toby Bloom, J. Vivien Bonazzi, Paul Brooks, G. Buck, C. Buhay, D. Busam, Joseph L. Campbell, S. Canon, B. Cantarel, P. Chain, I. Chen, Lei Chen, Shaila Chhibba, Ken Chu, Dawn M. Ciulla, J. Clemente, S. Clifton, S. Conlan, J. Crabtree, M. Cutting, Noam J. Davidovics, Catherine C. Davis, T. DeSantis, C. Deal, Kimberley D. Delehaunty, F. Dewhirst, E. Deych, Yan Ding, D. Dooling, Shannon P. Dugan, W. Dunne, A. S. Durkin, Robert C. Edgar, R. Erlich, Candace N. Farmer, R. Farrell, Karoline Faust, M. Feldgarden, Victor Felix, Sheila A Fisher, A. Fodor, L. Forney, Les Foster, V. Di Francesco, Jonathan Friedman, Dennis C. Friedrich, C. Fronick, L. Fulton, Hongyu Gao, Nathalia Garcia, G. Giannoukos, C. Giblin, Maria Y. Giovanni, J. Goldberg, Johannes Goll, Antonio Gonzalez, Allison D. Griggs, Sharvari Gujja, B. Haas, Holli A. Hamilton, Emily L. Harris, Theresa A. Hepburn, Brandi N. Herter, D. Hoffmann, M. Holder, Clinton Howarth, Katherine H. Huang, Susan M. Huse, J. Izard, J. Jansson, Huaiyang Jiang, Catherine Jordan, Vandita Joshi, J. Katancik, W. Keitel, S. Kelley, C. Kells, Susan Kinder-Haake, N. King, R. Knight, D. Knights, H. Kong, O. Koren, S. Koren, Karthik Kota, C. Kovar, N. Kyrpides, Patricio S. La Rosa, Sandy Lee, K. P. Lemon, N. Lennon, Cecil M. Lewis, L. Lewis, R. Ley, Kelvin Li, K. Liolios, Bo Liu, Yue Liu, C. Lo, C. Lozupone, R. Lunsford, T. Madden, A. Mahurkar, P. Mannon, E. Mardis, V. Markowitz, K. Mavrommatis, J. McCorrison, Daniel McDonald, J. Mcewen, A. McGuire, P. Mcinnes, Teena Mehta, K. Mihindukulasuriya, J. Miller, P. Minx, I. Newsham, C. Nusbaum, M. O'Laughlin, Joshua Orvis, I. Pagani, Krishna Palaniappan, Shital M. Patel, Matthew D. Pearson, Jane L. Peterson, M. Podar, C. Pohl, K. Pollard, M. Priest, L. Proctor, X. Qin, J. Raes, J. Ravel, J. Reid, Mina Rho, R. Rhodes, Kevin P. Riehle, M. Rivera, B. Rodriguez-Mueller, Y. Rogers, M. C. Ross, C. Russ, Ravi K. Sanka, J. Pamela Sankar, Fah Sathirapongsasuti, J. Schloss, P. Schloss, T. Schmidt, M. Scholz, L. Schriml, Alyxandria M. Schubert, N. Segata, J. Segre, W. Shannon, R. Sharp, T. Sharpton, N. Shenoy, N. Sheth, Gina A. Simone, Indresh Singh, C. Smillie, J. Sobel, Daniel D. Sommer, P. Spicer, G. Sutton, S. Sykes, D. Tabbaa, M. Thiagarajan, Chad Tomlinson, M. Torralba, Todd J. Treangen, R. Truty, T. Vishnivetskaya, Jason R. Walker, Lu Wang, Zhengyuan O. Wang, D. Ward, W. Warren, M. Watson, Christopher Wellington, K. Wetterstrand, J. White, Katarzyna Wilczek-Boney, Yuanqing Wu, K. Wylie, T. Wylie, C. Yandava, Liang Ye, Yuzhen Ye, Shibu Yooseph, Bonnie P. Youmans, Lan Zhang, Yanjiao Zhou, Yiming Zhu, L. Zoloth, Jeremy D. Zucker, B. Birren, R. Gibbs, S. Highlander, G. Weinstock, R. Wilson, O. White
11 2012
11
🐜
🐜 Neoadjuvant PD‐1 Blockade in Resectable Lung Cancer
35 auth. P. Forde, J. Chaft, Kellie N. Smith, V. Anagnostou, T. Cottrell, M. Hellmann, M. Zahurak, Stephen C. Yang, David R. Jones, S. Broderick, R. Battafarano, M. Velez, N. Rekhtman, Zachary T. Olah, J. Naidoo, ... K. Marrone, Franco Verde, Haidan Guo, Jiajia Zhang, J. Caushi, H. Chan, John-William Sidhom, R. Scharpf, J. White, E. Gabrielson, Hao Wang, G. Rosner, V. Rusch, J. Wolchok, T. Merghoub, J. Taube, V. Velculescu, S. Topalian, J. Brahmer, D. Pardoll
10 2018
10
🐜
🦁 Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples
J. White, N. Nagarajan, Mihai Pop
10 2009
10
🦁
🐜 Tumor Microbiome Diversity and Composition Influence Pancreatic Cancer Outcomes
31 auth. E. Riquelme, Yu Zhang, Liangliang Zhang, M. Montiel, Michelle Zoltan, W. Dong, P. Quesada, I. Sahin, Vidhi Chandra, A. Lucas, P. Scheet, Hanwen Xu, S. Hanash, Lei Feng, J. Burks, ... K. Do, Christine B. Peterson, D. Nejman, C. Tzeng, Michael P. Kim, C. Sears, N. Ajami, J. Petrosino, L. Wood, A. Maitra, R. Straussman, M. Katz, J. White, R. Jenq, J. Wargo, F. McAllister
9 2019
9
🐜
🐜 Genome-wide cell-free DNA fragmentation in patients with cancer
36 auth. S. Cristiano, A. Leal, J. Phallen, J. Fiksel, V. Adleff, D. C. Bruhm, S. Jensen, J. Medina, C. Hruban, J. White, Doreen Palsgrove, N. Niknafs, V. Anagnostou, P. Forde, J. Naidoo, ... Kristen Marrone, J. Brahmer, Brian D Woodward, H. Husain, K. V. van Rooijen, M. W. Ørntoft, A. H. Madsen, C. J. van de Velde, M. Verheij, A. Cats, C. Punt, G. Vink, N. V. van Grieken, M. Koopman, R. Fijneman, J. Johansen, H. Nielsen, G. Meijer, C. Andersen, R. Scharpf, V. Velculescu
9 2019
9
🐜
🐜 Direct detection of early-stage cancers using circulating tumor DNA
37 auth. J. Phallen, M. Sausen, V. Adleff, A. Leal, C. Hruban, J. White, V. Anagnostou, J. Fiksel, S. Cristiano, E. Papp, S. Speir, T. Reinert, Mai-Britt Worm Orntoft, Brian D Woodward, D. Murphy, ... S. Parpart-Li, David R. Riley, Monica Nesselbush, Naomi A. Sengamalay, Andrew P. Georgiadis, Q. K. Li, M. Madsen, F. Mortensen, J. Huiskens, C. Punt, N. V. van Grieken, R. Fijneman, G. Meijer, H. Husain, R. Scharpf, L. Diaz, SiaΜ‚n Jones, Samuel V. Angiuoli, T. Ørntoft, H. Nielsen, C. Andersen, V. Velculescu
9 2017
9
🐜
🐜 IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
17 auth. I. Chen, Ken Chu, Krishna Palaniappan, Manoj Pillay, Anna Ratner, Jinghua Huang, Marcel Huntemann, N. Varghese, J. White, Rekha Seshadri, ... Tatyana Smirnova, Edward Kirton, S. Jungbluth, T. Woyke, E. Eloe-Fadrosh, Natalia N. Ivanova, N. Kyrpides
9 2018
9
🐜
🐜 Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non-Small Cell Lung Cancer.
29 auth. V. Anagnostou, Kellie N. Smith, P. Forde, N. Niknafs, Rohit Bhattacharya, J. White, Theresa Zhang, V. Adleff, J. Phallen, N. Wali, C. Hruban, V. Guthrie, Kristen Rodgers, J. Naidoo, Hyunseok Kang, ... W. Sharfman, C. Georgiades, Franco Verde, P. Illei, Q. K. Li, E. Gabrielson, M. Brock, C. Zahnow, S. Baylin, R. Scharpf, J. Brahmer, R. Karchin, D. Pardoll, V. Velculescu
9 2017
9
🐜
🐜 Microbiota organization is a distinct feature of proximal colorectal cancers
29 auth. Christine M Dejea, E. Wick, Elizabeth M. Hechenbleikner, J. White, J. M. Mark Welch, B. Rossetti, S. Peterson, E. Snesrud, G. Borisy, M. Lazarev, E. Stein, J. Vadivelu, A. Roslani, Ausuma A Malik, J. Wanyiri, ... K. Goh, Thevambiga Iyadorai, Kai Fu, F. Wan, Nicolas J. Llosa, F. Housseau, K. Romans, Xinqun Wu, F. McAllister, Shaoguang Wu, B. Vogelstein, K. Kinzler, D. Pardoll, C. Sears
9 2014
9
🐜
🐜 Clinical implications of genomic alterations in the tumour and circulation of pancreatic cancer patients
26 auth. M. Sausen, J. Phallen, V. Adleff, SiaΜ‚n Jones, R. Leary, M. Barrett, V. Anagnostou, S. Parpart-Li, D. Murphy, Qing Kay Li, C. Hruban, R. Scharpf, J. White, P. O'dwyer, P. Allen, ... J. Eshleman, C. Thompson, D. Klimstra, D. Linehan, A. Maitra, R. Hruban, Luis A. Diaz, D. V. Von Hoff, J. Johansen, J. Drebin, V. Velculescu
8 2015
8
🐜
🐜 Establishing guidelines to harmonize tumor mutational burden (TMB): in silico assessment of variation in TMB quantification across diagnostic platforms: phase I of the Friends of Cancer Research TMB Harmonization Project
33 auth. Diana M Merino, L. McShane, D. Fabrizio, V. Funari, Shu-Jen Chen, J. White, P. Wenz, J. Baden, J. Barrett, R. Chaudhary, Li Chen, W. Chen, J. Cheng, D. Cyanam, J. Dickey, ... Vikas Gupta, M. Hellmann, E. Helman, Yali Li, J. Maas, Arnaud Papin, R. Patidar, K. Quinn, N. Rizvi, H. Tae, Christine Ward, Mingchao Xie, A. Zehir, Chen Zhao, M. Dietel, A. Stenzinger, M. Stewart, J. Allen
8 2020
8
🐜
🐜 Metabolism links bacterial biofilms and colon carcinogenesis.
18 auth. C. Johnson, Christine M Dejea, D. Edler, L. Hoang, Antonio F. SantidriΓ‘n, Brunhilde H. Felding, J. Ivanisevic, Kevin Y. Cho, E. Wick, Elizabeth M. Hechenbleikner, ... Winnie Uritboonthai, L. Goetz, R. Casero, D. Pardoll, J. White, G. Patti, C. Sears, G. Siuzdak
8 2015
8
🐜
🐜 Detection and characterization of lung cancer using cell-free DNA fragmentomes
38 auth. D. Mathios, J. S. Johansen, S. Cristiano, J. Medina, J. Phallen, K. Larsen, D. C. Bruhm, N. Niknafs, Leonardo Ferreira, V. Adleff, Jia Yuee Chiao, A. Leal, Michael Noe, J. White, Adith S. Arun, ... C. Hruban, A. Annapragada, S. Jensen, M. W. Ørntoft, A. H. Madsen, B. Carvalho, M. de Wit, J. Carey, N. Dracopoli, T. Maddala, K. Fang, A. Hartman, P. Forde, V. Anagnostou, J. Brahmer, R. Fijneman, H. Nielsen, G. Meijer, C. Andersen, A. Mellemgaard, S. Bojesen, R. Scharpf, V. Velculescu
8 2021
8
🐜