D. Lavenier's Profile

Role	Title	Level	Year	L/R
🐜	Genome Sequence of the Pea Aphid Acyrthosiphon pisum 219 auth. S. Richards, R. Gibbs, N. Gerardo, N. Moran, A. Nakabachi, D. Stern, D. Tagu, Alex C. C. Wilson, D. Muzny, C. Kovar, Andrew Cree, J. Chacko, Mimi N. Chandrabose, M. Dao, H. Dinh, ... Ramatu Ayiesha Gabisi, S. Hines, J. Hume, Shalini N. Jhangian, Vandita Joshi, L. Lewis, Yih-shin Liu, John Lopez, M. Morgan, N. Nguyen, Geoffrey Okwuonu, S. Ruiz, J. Santibanez, Rita A. Wright, G. Fowler, Matthew Hitchens, R. Lozado, C. Moen, David L. Steffen, J. Warren, Jingkun Zhang, L. Nazareth, Dean Chavez, Clay Davis, Sandy Lee, B. M. Patel, ling-ling Pu, S. Bell, A. Johnson, Selina M. Vattathil, Rex L. Williams, S. Shigenobu, P. Dang, M. Morioka, T. Fukatsu, T. Kudo, S. Miyagishima, Huaiyang Jiang, K. Worley, F. Legeai, J. Gauthier, O. Collin, Lan Zhang, Hsiu-Chuan Chen, O. Ermolaeva, W. Hlavina, Y. Kapustin, B. Kiryutin, P. Kitts, D. Maglott, Terence D. Murphy, K. Pruitt, V. Sapojnikov, A. Souvorov, F. Thibaud-Nissen, F. Camara, R. Guigó, M. Stanke, Victor V. Solovyev, P. Kosarev, Don G. Gilbert, T. Gabaldón, J. Huerta-Cepas, M. Marcet-Houben, M. Pignatelli, A. Moya, C. Rispe, Morgane Ollivier, H. Quesneville, Emmanuelle Permal, C. Lloréns, R. Futami, D. Hedges, H. Robertson, T. Alioto, M. Mariotti, N. Nikoh, J. McCutcheon, G. Burke, Alexandra Kamins, A. Latorre, P. Ashton, F. Calevro, H. Charles, S. Colella, A. Douglas, G. Jander, Derek H. Jones, G. Febvay, L. Kamphuis, P. Kushlan, S. Macdonald, J. Ramsey, J. Schwartz, S. Seah, G. Thomas, A. Vellozo, Bodil N. Cass, P. Degnan, B. Hurwitz, Teresa E. Leonardo, R. Koga, B. Altincicek, C. Anselme, H. Atamian, Seth M. Barribeau, M. Vos, E. Duncan, J. Evans, M. Ghanim, A. Heddi, I. Kaloshian, C. Vincent-Monégat, Benjamin J. Parker, V. Pérez-Brocal, Y. Rahbé, Chelsea J. Spragg, J. Tamames, D. Tamarit, C. Tamborindeguy, A. Vilcinskas, Ryan D. Bickel, J. Brisson, T. Butts, Chun‐che Chang, O. Christiaens, G. K. Davis, E. Duncan, D. Ferrier, Masatoshi Iga, R. Janssen, Hsiao-ling Lu, A. McGregor, T. Miura, G. Smagghe, James M Smith, M. V. Zee, R. Velarde, M. Wilson, P. Dearden, O. Edwards, K. Gordon, R. Hilgarth, S. D. Rider, Dayalan G. Srinivasan, T. Walsh, Asano Ishikawa, Stéphanie Jaubert-Possamai, B. Fenton, Wenting Huang, Guillaume Rizk, D. Lavenier, J. Nicolas, C. Smadja, Jing-Jiang Zhou, F. G. Vieira, Xiaoli He, Renhu Liu, J. Rozas, L. Field, P. Campbell, J. Carolan, Carol I. J. Fitzroy, K. Reardon, G. Reeck, Karam B. Singh, T. Wilkinson, J. Huybrechts, M. Abdel-latief, A. Robichon, J. Veenstra, F. Hauser, Giuseppe Cazzamali, Martina Schneider, M. Williamson, Elisabeth Stafflinger, Karina K. Hansen, C. Grimmelikhuijzen, Daniel R. G. Price, M. Caillaud, Eric Edward Van Fleet, Q. Ren, J. Gatehouse, V. Brault, B. Monsion, Jason Diaz, L. Hunnicutt, H. Ju, Ximo Pechuan, J. Aguilar, T. Cortés, Benjamín Ortiz-Rivas, D. Martínez-Torres, A. Dombrovsky, Richard P. Dale, T. Davies, M. Williamson, Andrew K. Jones, D. Sattelle, S. Williamson, A. Wolstenholme, Ludovic Cottret, D. Heckel, W. Hunter	10	2010	10 🐜
🐜	Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species 91 auth. K. Bradnam, Joseph N. Fass, A. Alexandrov, Paul Baranay, Michael Bechner, I. Birol, Sébastien Boisvert, Jarrod Chapman, Guillaume Chapuis, R. Chikhi, H. Chitsaz, Wen-Chi Chou, J. Corbeil, Cristian Del Fabbro, T. R. Docking, ... R. Durbin, Dent Earl, S. Emrich, Pavel Fedotov, Nuno A. Fonseca, Ganeshkumar Ganapathy, R. Gibbs, S. Gnerre, Élénie Godzaridis, Steve Goldstein, M. Haimel, Giles Hall, D. Haussler, Joseph B Hiatt, Isaac Y. Ho, Jason T. Howard, Martin Hunt, S. Jackman, D. Jaffe, E. Jarvis, Huaiyang Jiang, S. Kazakov, P. Kersey, J. Kitzman, James R. Knight, S. Koren, T. Lam, D. Lavenier, François Laviolette, Yingrui Li, Zhenyu Li, Binghang Liu, Yue Liu, Ruibang Luo, Iain MacCallum, M. MacManes, Nicolas Maillet, S. Melnikov, D. Naquin, Z. Ning, T. Otto, B. Paten, O. Paulo, A. Phillippy, F. Pina-Martins, Michael Place, Dariusz Przybylski, X. Qin, Carson Qu, Filipe J. Ribeiro, S. Richards, D. Rokhsar, J. Ruby, S. Scalabrin, M. Schatz, D. Schwartz, A. Sergushichev, Ted Sharpe, T. Shaw, J. Shendure, Yujian Shi, J. Simpson, H. Song, F. Tsarev, F. Vezzi, Riccardo Vicedomini, Bruno M. Vieira, Jun Wang, K. Worley, Shuangye Yin, S. Yiu, Jianying Yuan, Guojie Zhang, Hao Zhang, Shiguo Zhou, I. Korf	9	2013	9 🐜
🐜	Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software 67 auth. A. Sczyrba, P. Hofmann, Peter Belmann, D. Koslicki, Stefan Janssen, J. Dröge, Ivan Gregor, Stephan Majda, Jessika Fiedler, Eik Dahms, A. Bremges, A. Fritz, R. Garrido-Oter, T. S. Jørgensen, N. Shapiro, ... Philip D. Blood, A. Gurevich, Yang Bai, Dmitrij Turaev, Matthew Z. DeMaere, R. Chikhi, N. Nagarajan, C. Quince, F. Meyer, Monika Balvociute, L. Hansen, S. Sørensen, Burton K. H. Chia, Bertrand Denis, Jeff L. Froula, Zhong Wang, R. Egan, Dongwan Don Kang, Jeffrey J. Cook, Charles Deltel, M. Beckstette, C. Lemaitre, P. Peterlongo, Guillaume Rizk, D. Lavenier, Yu-Wei Wu, S. Singer, Chirag Jain, M. Strous, Heiner Klingenberg, P. Meinicke, M. D. Barton, T. Lingner, Hsin-Hung Lin, Yu-Chieh Liao, G. G. Z. Silva, Daniel A. Cuevas, R. Edwards, S. Saha, V. Piro, B. Renard, Mihai Pop, H. Klenk, M. Göker, N. Kyrpides, T. Woyke, J. Vorholt, P. Schulze-Lefert, E. Rubin, A. Darling, T. Rattei, A. Mchardy	9	2017	9 🐜
🐜	Assemblathon 1: a competitive assessment of de novo short read assembly methods. 71 auth. Dent Earl, K. Bradnam, John A St John, A. Darling, D. Lin, Joseph N. Fass, H. O. Yu, Vince Buffalo, D. Zerbino, M. Diekhans, N. Nguyen, P. Ariyaratne, W. Sung, Z. Ning, M. Haimel, ... J. Simpson, Nuno A. Fonseca, I. Birol, T. R. Docking, Isaac Y. Ho, D. Rokhsar, R. Chikhi, D. Lavenier, Guillaume Chapuis, D. Naquin, Nicolas Maillet, M. Schatz, David R. Kelley, A. Phillippy, S. Koren, Shiaw-Pyng Yang, Wei Wu, Wen-Chi Chou, Anuj Srivastava, T. Shaw, J. Ruby, Peter Skewes-Cox, Miguel Betegon, M. Dimon, Victor V. Solovyev, I. Seledtsov, P. D. Kosarev, D. Vorobyev, R. Ramirez-Gonzalez, R. Leggett, D. MacLean, Fangfang Xia, Ruibang Luo, Zhenyu Li, Yinlong Xie, Binghang Liu, S. Gnerre, Iain MacCallum, Dariusz Przybylski, Filipe J. Ribeiro, Shuangye Yin, Ted Sharpe, Giles Hall, P. Kersey, R. Durbin, S. Jackman, Jarrod Chapman, Xiaoqiu Huang, J. Derisi, M. Cáccamo, Yingrui Li, D. Jaffe, R. Green, D. Haussler, I. Korf, B. Paten	9	2011	9 🐜
🐜	Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species 36 auth. T. Mathers, Yazhou Chen, G. Kaithakottil, F. Legeai, Sam T. Mugford, Patrice Baa-Puyoulet, A. Bretaudeau, Bernardo J. Clavijo, S. Colella, O. Collin, T. Dalmay, T. Derrien, Honglin Feng, T. Gabaldón, A. Jordan, ... Irene Julca, G. Kettles, K. Kowitwanich, D. Lavenier, P. Lenzi, S. López-Gomollón, Damian Loska, Daniel Mapleson, Florian Maumus, Simon Moxon, Daniel R. G. Price, A. Sugio, M. van Munster, M. Uzest, D. Waite, G. Jander, D. Tagu, Alex C. C. Wilson, C. van Oosterhout, D. Swarbreck, S. Hogenhout	8	2017	8 🐜
🐢	Evaluation of the streams-C C-to-FPGA compiler: an applications perspective J. Frigo, M. Gokhale, D. Lavenier	6	2001	6 🐢
🐢	GASSST: global alignment short sequence search tool Guillaume Rizk, D. Lavenier	6	2010	6 🐢
🐜	Multiple comparative metagenomics using multiset k-mer counting 7 auth. Gaëtan Benoit, P. Peterlongo, M. Mariadassou, E. Drezen, Sophie Schbath, D. Lavenier, ... C. Lemaitre	6	2016	6 🐜
🐜	Bioinformatic prediction , deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid 11 auth. F. Legeai, Guillaume Rizk, Thomas Walsh, O. Edwards, K. Gordon, D. Lavenier, ... N. Leterme, A. Méreau, J. Nicolas, D. Tagu, Stéphanie Jaubert-Possamai	6	2010	6 🐜
🐜	Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph 7 auth. Gaëtan Benoit, C. Lemaitre, D. Lavenier, E. Drezen, Thibault Dayris, R. Uricaru, ... Guillaume Rizk	6	2015	6 🐜
🐢	PLAST: parallel local alignment search tool for database comparison Van Hoa Nguyen, D. Lavenier	6	2009	6 🐢