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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
67 auth.
A. Sczyrba,
P. Hofmann,
Peter Belmann,
D. Koslicki,
Stefan Janssen,
J. Dröge,
Ivan Gregor,
Stephan Majda,
Jessika Fiedler,
Eik Dahms,
A. Bremges,
A. Fritz,
R. Garrido-Oter,
T. S. Jørgensen,
N. Shapiro,
...
Philip D. Blood,
A. Gurevich,
Yang Bai,
Dmitrij Turaev,
Matthew Z. DeMaere,
R. Chikhi,
N. Nagarajan,
C. Quince,
F. Meyer,
Monika Balvociute,
L. Hansen,
S. Sørensen,
Burton K. H. Chia,
Bertrand Denis,
Jeff L. Froula,
Zhong Wang,
R. Egan,
Dongwan Don Kang,
Jeffrey J. Cook,
Charles Deltel,
M. Beckstette,
C. Lemaitre,
P. Peterlongo,
Guillaume Rizk,
D. Lavenier,
Yu-Wei Wu,
S. Singer,
Chirag Jain,
M. Strous,
Heiner Klingenberg,
P. Meinicke,
M. D. Barton,
T. Lingner,
Hsin-Hung Lin,
Yu-Chieh Liao,
G. G. Z. Silva,
Daniel A. Cuevas,
R. Edwards,
S. Saha,
V. Piro,
B. Renard,
Mihai Pop,
H. Klenk,
M. Göker,
N. Kyrpides,
T. Woyke,
J. Vorholt,
P. Schulze-Lefert,
E. Rubin,
A. Darling,
T. Rattei,
A. Mchardy
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9 |
2017 |
9
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CAMISIM: simulating metagenomes and microbial communities
13 auth.
A. Fritz,
P. Hofmann,
Stephan Majda,
Eik Dahms,
J. Dröge,
Jessika Fiedler,
T. Lesker,
Peter Belmann,
Matthew Z. DeMaere,
A. Darling,
...
A. Sczyrba,
A. Bremges,
A. Mchardy
|
7 |
2018 |
7
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Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software
67 auth.
A. Sczyrba,
P. Hofmann,
Peter Belmann,
D. Koslicki,
Stefan Janssen,
J. Dröge,
Ivan Gregor,
Stephan Majda,
Jessika Fiedler,
Eik Dahms,
A. Bremges,
A. Fritz,
R. Garrido-Oter,
T. S. Jørgensen,
N. Shapiro,
...
Philip D. Blood,
A. Gurevich,
Yang Bai,
Dmitrij Turaev,
Matthew Z. DeMaere,
R. Chikhi,
N. Nagarajan,
C. Quince,
F. Meyer,
Monika Balvoit,
L. Hansen,
S. Sørensen,
Burton K. H. Chia,
Bertrand Denis,
Jeff L. Froula,
Zhong Wang,
R. Egan,
Dongwan D. Kang,
Jeffrey J. Cook,
Charles Deltel,
M. Beckstette,
C. Lemaitre,
P. Peterlongo,
Guillaume Rizk,
D. Lavenier,
Yu-Wei Wu,
S. Singer,
Chirag Jain,
M. Strous,
Heiner Klingenberg,
P. Meinicke,
Michael Barton,
T. Lingner,
Hsin-Hung Lin,
Yu-Chieh Liao,
G. G. Z. Silva,
Daniel A. Cuevas,
R. Edwards,
S. Saha,
V. Piro,
B. Renard,
Mihai Pop,
H. Klenk,
M. Göker,
N. Kyrpides,
T. Woyke,
J. Vorholt,
P. Schulze-Lefert,
E. Rubin,
A. Darling,
T. Rattei,
A. Mchardy
|
5 |
2017 |
5
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Genome size of chrysophytes varies with cell size and nutritional mode
Jana L. Olefeld,
Stephan Majda,
D. Albach,
Sabina Marks,
J. Boenigk
|
4 |
2018 |
4
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🦁
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Intraspecific Variation in Protists: Clues for Microevolution from Poteriospumella lacustris (Chrysophyceae)
Stephan Majda,
J. Boenigk,
D. Beisser
|
3 |
2019 |
3
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Nutrient-driven genome evolution revealed by comparative genomics of chrysomonad flagellates
Stephan Majda,
D. Beisser,
J. Boenigk
|
3 |
2021 |
3
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|
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A manually curated compendium of expression profiles for the microbial cell factory Corynebacterium glutamicum
73 auth.
Angela Kranz,
T. Polen,
Christian Kotulla,
Annette Arndt,
Graziella Bosco,
Michael Bussmann,
A. Chattopadhyay,
A. Cramer,
Cedric-Farhad Davoudi,
Ursula Degner,
Ramon Diesveld,
Raphael Freiherr von Boeselager,
Kim Gärtner,
Cornelia Gätgens,
T. Georgi,
...
Christian Geraths,
S. Haas,
A. Heyer,
Max Hünnefeld,
T. Ishige,
Armin Kabus,
Nicolai Kallscheuer,
Larissa Kever,
Simon Klaffl,
Britta Kleine,
M. Kočan,
A. Koch-Koerfges,
K. Kraxner,
Andreas Krug,
Aileen Krüger,
A. Küberl,
Mohamed Labib,
C. Lange,
C. Mack,
Tomoya Maeda,
R. Mahr,
Stephan Majda,
Andrea Michel,
Xenia Morosov,
Olga Müller,
A. Nanda,
J. Nickel,
Jennifer Pahlke,
E. Pfeifer,
Laura Platzen,
Paul Ramp,
D. Rittmann,
S. Schaffer,
Sandra Scheele,
Stephanie Spelberg,
J. Schulte,
J. Schweitzer,
Georg Sindelar,
Ulrike Sorger-Herrmann,
Markus Spelberg,
C. Stansen,
Apilaasha Tharmasothirajan,
J. V. Ooyen,
Philana V van Summeren-Wesenhagen,
M. Vogt,
Sabrina Witthoff,
Lingfeng Zhu,
B. Eikmanns,
M. Oldiges,
Georg Schaumann,
M. Baumgart,
M. Brocker,
L. Eggeling,
R. Freudl,
Julia Frunzke,
Jan Marienhagen,
V. Wendisch,
M. Bott
|
1 |
2022 |
1
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|
🐬
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Genome size of chrysophytes varies with cell size and nutritional mode
Jana L. Olefeld,
Stephan Majda,
D. Albach,
Sabina Marks,
J. Boenigk
|
0 |
2018 |
0
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|
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Protein k-mers enable assembly-free microbial metapangenomics
126 auth.
O. Botvinnik,
L. Irber,
Phillip T Brooks,
Taylor E. Reiter,
Mahmudur NTessa Pierce-Ward,
Rahman Hera,
D. Koslicki,
CTitus Brown,
Tyler P. Barnum,
Israel A Figueroa,
Charlotte I. Carlström,
Lauren N Lucas,
A. Engelbrektson,
John D Coates,
Dominik Moritz,
...
Michael P. O’Brien,
F. Reidl,
Blair D. Sullivan,
A. Sczyrba,
Peter Hofmann,
Peter Belmann,
Stefan Janssen,
J. Dröge,
Ivan Gregor,
Stephan Majda,
Jessika Fiedler,
Eik Dahms,
A. Mchardy,
F. Meyer,
A. Fritz,
Z.-L. Deng,
A. Gurevich,
G. Robertson,
M. Alsér,
D. Antipov,
F. Beghini,
D. Bertrand,
D. Bickhart,
M. Kolmogorov,
Elizabeth Tseng,
D. Portik,
A. Korobeynikov,
Donovan H. Parks,
M. Chuvochina,
Christian Rinke,
Aaron J. Mussig,
Pierre-Alain Chaumeil,
Philip Hugenholtz,
H. Tettelin,
David Riley,
C. Cattuto,
D. Medini,
T. Tatusova,
Michael DiCuccio,
Azat Badretdin,
V. Chetvernin,
Eric P. Nawrocki,
L. Zaslavsky,
A. Lomsadze,
Kim D Pruitt,
M. Borodovsky,
J. Ostell,
Wenjun Li,
K. O'Neill,
D. Haft,
G. Coulouris,
F. Chitsaz,
M. K. Derbyshire,
A Scott Durkin,
F. Thibaud-Nissen,
Chirag Jain,
Luis M. Rodriguez-R,
A. Phillippy,
K. Konstantinidis,
S. Aluru,
A. Westbrook,
Jordan S. Ramsdell,
Taruna A Schuelke,
Louisa Normington,
RDaniel Bergeron,
WKelley Thomas,
M. MacManes,
C. Lozupone,
Karoline Faust,
Jeroen Raes,
J. Faith,
Daniel N Frank,
Jesse R. Zaneveld,
Je�rey,
I. Gordon,
Rob Knight,
David I Edwards,
John Vollmers,
Sandra Wiegand,
Anne-Kristin Kaster,
Alexander Shlemov,
Alicia A. Gingrich,
Dylan Haynes,
Maxime Déraspe,
Sébastien Boisvert,
François Laviolette,
Paul H Roy,
J. Corbeil,
Andrew J. Page,
Carla A Cummins,
Martin Hunt,
Vanessa K. Wong,
Sandra Reuter,
Matthew T. G. Holden,
Maria Fookes,
D. Falush,
Jacqueline A. Keane,
Julian Parkhill,
Philip Dixon,
Oliver Schwengers,
L. Jelonek,
M. Dieckmann,
Sebastian Beyvers,
Jochen Blom,
A. Goesmann,
Doug Hyatt,
Gwo-Liang Chen,
P. LoCascio,
Miriam L Land,
F. Larimer,
L. Hauser
|
0 |
2022 |
0
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