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A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control consortium
161 auth.
Z. Su,
Paweł P. Łabaj,
Sheng Li,
J. Thierry-Mieg,
D. Thierry-Mieg,
Wei Shi,
Charles Wang,
G. Schroth,
R. Setterquist,
Johnf . Thompson,
W. Jones,
Wenzhong Xiao,
Weihong Xu,
R. Jensen,
Reagan J. Kelly,
...
Joshua Xu,
A. Conesa,
Cesare Furlanello,
Hanlin Gao,
H. Hong,
N. Jafari,
S. Letovsky,
Yang Liao,
Fei Lu,
E. Oakeley,
Zhiyu Peng,
C. Praul,
Javier Santoyo-Lopez,
A. Scherer,
Tieliu Shi,
G. Smyth,
F. Staedtler,
P. Sykacek,
Xinzhen Tan,
E. Thompson,
J. Vandesompele,
May D. Wang,
Jian Wang,
R. Wolfinger,
J. Zavadil,
S. Auerbach,
Wenjun Bao,
H. Binder,
Thomas M. Blomquist,
M. Brilliant,
P. Bushel,
Weimin Cai,
Jennifer G. Catalano,
Ching-Wei Chang,
Tao Chen,
Geng Chen,
Rong Chen,
M. Chierici,
T. Chu,
Djork-Arné Clevert,
Youping Deng,
A. Derti,
V. Devanarayan,
Z. Dong,
J. Dopazo,
T. Du,
H. Fang,
Yongxiang Fang,
M. Fasold,
Anita Fernandez,
M. Fischer,
Pedro Furió-Tarí,
J. Fuscoe,
Florian Caimet,
S. Gaj,
J. Gandara,
Huan Gao,
W. Ge,
Y. Gondo,
Binsheng Gong,
Meihua Gong,
Zhuolin Gong,
B. Green,
Chao Guo,
Lei Guo,
Li Guo,
J. Hadfield,
J. Hellemans,
Sepp Hochreiter,
Meiwen Jia,
Min Jian,
Charles D. Johnson,
S. Kay,
J. Kleinjans,
S. Lababidi,
S. Levy,
Quan-Zhen Li,
Li Li,
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E. Stupka,
Yutaka Suzuki,
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M. Tinning,
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E. Wieben,
J. Willey,
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J. Xuan,
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Zhan Ye,
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Wenqian Zhang,
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Yanyan Zhang,
Chen Zhao,
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P. Zumbo,
W. Tong,
David P. Kreil,
C. Mason,
Leming Shi
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2014 |
9
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Single-Cell RNA-Seq Technologies and Related Computational Data Analysis
Geng Chen,
B. Ning,
Tieliu Shi
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9 |
2019 |
9
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🐜
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Proteomics identifies new therapeutic targets of early-stage hepatocellular carcinoma
39 auth.
Ying Jiang,
A. Sun,
Yang Zhao,
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Huichuan Sun,
Xinrong Yang,
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L. Ren,
Bo Hu,
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Menghuan Zhang,
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...
Manli Zhang,
Yin Huang,
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Cheng Huang,
Meng Yan,
Mingchao Wang,
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Fang Tian,
Hualin Xu,
Jian Zhou,
Zhenyu Wu,
Tieliu Shi,
Weimin Zhu,
J. Qin,
Lu Xie,
Jia Fan,
X. Qian,
F. He,
Chinese Human Proteome Project Consortium
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9 |
2019 |
9
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The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
201 auth.
Leming Shi,
G. Campbell,
W. Jones,
F. Campagne,
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S. Walker,
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T. Chu,
F. Goodsaid,
L. Pusztai,
J. Shaughnessy,
A. Oberthuer,
Russell S. Thomas,
R. Paules,
M. Fielden,
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B. Barlogie,
Weijie Chen,
Pan Du,
M. Fischer,
Cesare Furlanello,
B. Gallas,
Xijin Ge,
D. Megherbi,
W. Symmans,
May D. Wang,
John Zhang,
H. Bitter,
B. Brors,
P. Bushel,
M. Bylesjo,
Minjun Chen,
Jie Cheng,
Jing Cheng,
J. Chou,
T. Davison,
M. Delorenzi,
Youping Deng,
V. Devanarayan,
D. Dix,
J. Dopazo,
Kevin C. Dorff,
Fathi Elloumi,
Jianqing Fan,
Shicai Fan,
Xiaohui Fan,
H. Fang,
Nina Gonzaludo,
K. Hess,
H. Hong,
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R. Irizarry,
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Christophe Gerard Lambert,
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Yanen Li,
Zhen Li,
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Guozhen Liu,
E. Lobenhofer,
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Wen-da Luo,
M. Mccall,
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V. Thodima,
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2010 |
9
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TCMID: traditional Chinese medicine integrative database for herb molecular mechanism analysis
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Meixia Zhang,
Z. Yi,
Chengping Wen,
Tieliu Shi
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8 |
2012 |
8
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Comparison of RNA-seq and microarray-based models for clinical endpoint prediction
76 auth.
Wenqian Zhang,
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F. Hertwig,
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Jian Wang,
Cesare Furlanello,
V. Devanarayan,
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Youping Deng,
B. Hero,
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S. Asgharzadeh,
S. Avigad,
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M. Bessarabova,
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2015 |
8
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A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
33 auth.
Ying Yu,
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2014 |
8
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A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data
25 auth.
J. Luo,
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A. Scherer,
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Dalila B. Megherbi,
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Russell Thomas,
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2010 |
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TCMID 2.0: a comprehensive resource for TCM
7 auth.
Lin-fang Huang,
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Yiran Yu,
Huanlong Liu,
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2017 |
8
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Class I histone deacetylases are major histone decrotonylases: evidence for critical and broad function of histone crotonylation in transcription
13 auth.
Wei Wei,
Xiaoguang Liu,
Jiwei Chen,
Shennan Gao,
Lu Lu,
Huifang Zhang,
Guangjin Ding,
Zhiqiang Wang,
Zhongzhou Chen,
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Jiwen Li,
Jianjun Yu,
J. Wong
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7 |
2017 |
7
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A proteomic landscape of diffuse-type gastric cancer
39 auth.
S. Ge,
Xia Xia,
Chen Ding,
Bei Zhen,
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Jinwen Feng,
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Zhongqi Ge,
J. Ji,
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2018 |
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A global metagenomic map of urban microbiomes and antimicrobial resistance
669 auth.
D. Danko,
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Majelia Ampadu,
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W. Andrew,
H. Andrianjakarivony,
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Verónica Antelo,
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S. Mahmoud,
S. A. Majid,
Natalka Makogon,
D. Maldonado,
Krizzy Mallari,
T. Malta,
M. Mamun,
Dimitri Manoir,
Germán Marchandon,
Natalia Marciniak,
Sonia Marinovic,
B. Marques,
N. Mathews,
Yuri Matsuzaki,
V. Matthys,
M. May,
E. McComb,
A. Meagher,
A. Melamed,
W. Menary,
Katterinne N Mendez,
Argenis Mendez,
Irène Mauricette Mendy,
Irene Meng,
Ajay Menon,
Mark Menor,
Roy A. Meoded,
Nancy Merino,
Karishma Miah,
M. Mignotte,
Tanja Miketic,
Wilson Miranda,
Athena Mitsios,
Ryu Miura,
Kunihiko Miyake,
M. D. Moccia,
Natasha Mohan,
M. Mohsin,
Karobi Moitra,
Mauricio Moldes,
Laura M. Molina,
Jennifer Molinet,
Orgil-Erdene Molomjamts,
Eftar Moniruzzaman,
Soo-Kyeong Moon,
I. D. Moraes,
M. Moreno,
M. Mosella,
J. Moser,
C. Mozsary,
Amanda L. Muehlbauer,
Oasima Muner,
Muntaha Munia,
Naimah Munim,
Maureen Muscat,
Tatjana Mustac,
C. Muñoz,
F. Nadalin,
Areeg Naeem,
Dorottya Nagy‐Szakal,
M. Nakagawa,
Ashanti Narce,
Masaki Nasu,
Irene González Navarrete,
Hiba Naveed,
Bryan Nazario,
Narasimha Nedunuri,
Aida Nesimi,
W. C. Ng,
S. Ng,
Gloria Nguyen,
Elsy M. Ngwa,
Agier Nicolas,
P. Nicolas,
Abdollahi Nika,
Hosna Noorzi,
A. Nosrati,
D. Nunes,
Kathryn O’Brien,
Niamh B. O’Hara,
Gabriella Oken,
R. Olawoyin,
Javier Quilez Oliete,
Kiara Olmeda,
Tolulope Oluwadare,
I. A. Oluwadare,
Nils Ordioni,
Jenessa Orpilla,
Jacqueline Orrego,
M. Ortega,
Princess Osma,
Israel O. Osuolale,
Oluwatosin M. Osuolale,
M. Ota,
F. Oteri,
Y. Oto,
R. Ounit,
C. Ouzounis,
Subhamitra Pakrashi,
Rachel Paras,
C. Pardo-Esté,
Young-Ja Park,
Paulina Pastuszek,
Suraj Patel,
J. Pathmanathan,
A. Patrignani,
Manuel Pérez,
Ante Peros,
Sabrina Persaud,
Anisia Peters,
Adam T. Phillips,
L. Pineda,
Melissa P Pizzi,
Alma Plaku,
Alketa Plaku,
Brianna Pompa-Hogan,
María Gabriela Portilla,
Leonardo Posada,
M. Priestman,
Bharath Prithiviraj,
S. Priya,
Phanthira Pugdeethosal,
Catherine E. Pugh,
Benjamin Pulatov,
Angelika Pupiec,
Kyrylo A. Pyrshev,
T. Qing,
Saher Rahiel,
Savlatjon Rahmatulloev,
K. Rajendran,
Aneisa Ramcharan,
Adán Ramírez-Rojas,
Shahryar Rana,
Prashanthi Ratnanandan,
T. Read,
H. Rehrauer,
Renee Richer,
Alexis Rivera,
Michelle A. Rivera,
Alessandro Robertiello,
Courtney K. Robinson,
Paula Rodríguez,
Nayra Aguilar Rojas,
Pau Roldan,
Anyelic Rosario,
Sandra Roth,
María Ruiz,
Stephen Ruiz,
K. Russell,
M. Rybak,
Thais S Sabedot,
M. Sabina,
Ikuto Saito,
Yoshitaka Saito,
G. Salas,
C. Salazar,
Kaungmyat San,
Jorge L. Sanchez,
Khaliun Sanchir,
R. Sankar,
Paulo Thiago de Souza Santos,
Z. Saravi,
Kai Sasaki,
Yuma Sato,
Masaki Sato,
Seisuke Sato,
Ryo Sato,
Kaisei Sato,
Nowshin Sayara,
Steffen Schaaf,
Oli Schacher,
Anna-Lena Schinke,
R. Schlapbach,
C. Schori,
Jason R. Schriml,
Felipe Segato,
F. Sepúlveda,
Marianna S Serpa,
P. F. D. Sessions,
J. Severyn,
Maheen Shakil,
S. Shalaby,
Aliyah Shari,
Hyenah Shim,
Hikaru Shirahata,
Yuh Shiwa,
Ophélie Da Silva,
Jordana M. Silva,
Gwénola Simon,
Shaleni Singh,
Kasia Sluzek,
R. Smith,
Eun-mi So,
Núria Andreu Somavilla,
Yuya Sonohara,
Nuno Sousa,
Camila Souza,
J. Sperry,
Nicolas Sprinsky,
Stefan G. Stark,
A. Storia,
Kiyoshi Suganuma,
Hamood Suliman,
Jill Sullivan,
Arif Asyraf Md Supie,
Chisato Suzuki,
Sora Takagi,
Fumie Takahara,
N. Takahashi,
Kouetsu Takahashi,
Tomoki Takeda,
Isabella K T M Takenaka,
Soma Tanaka,
A. Tang,
Yuk Man Tang,
Emilio Tarcitano,
A. Tassinari,
Mahdi Taye,
Alexis Terrero,
E. Thambiraja,
Antonin Thiébaut,
Sade Thomas,
A. M. Thomas,
Y. Togashi,
T. Togashi,
Annalisa Tomaselli,
Masaru Tomita,
Itsuki Tomita,
O. Toth,
Nora C. Toussaint,
J. Tran,
Catalina Truong,
Stefan I. Tsonev,
Kazutoshi Tsuda,
T. Tsurumaki,
M. Tuz,
Ye Tymoshenko,
Carmen Urgiles,
Mariko Usui,
Sophie Vacant,
Laura E. Vann,
Fabienne Velter,
V. Ventorino,
Patricia Vera-Wolf,
R. Vicedomini,
Michael A. Suarez-Villamil,
Sierra Vincent,
R. Vivancos-Koopman,
Andrew Wan,
Cindy Wang,
Tomoro Warashina,
Ayuki Watanabe,
S. Weekes,
Johannes Werner,
David A. Westfall,
L. Wieler,
Michelle Williams,
Silver A. Wolf,
Brian Wong,
Y. Wong,
Tyler Wong,
Rasheena Wright,
T. Wunderlin,
Ryota Yamanaka,
Jingcheng Yang,
H. Yano,
G. C. Yeh,
Olena A. Yemets,
Tetiana Yeskova,
S. Yoshikawa,
Laraib Zafar,
Yang Zhang,
Shu Zhang,
Amy Zhang,
Yuanting Zheng,
S. Zubenko
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