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The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
201 auth.
Leming Shi,
G. Campbell,
W. Jones,
F. Campagne,
Z. Wen,
S. Walker,
Z. Su,
T. Chu,
F. Goodsaid,
L. Pusztai,
J. Shaughnessy,
A. Oberthuer,
Russell S. Thomas,
R. Paules,
M. Fielden,
...
B. Barlogie,
Weijie Chen,
Pan Du,
M. Fischer,
Cesare Furlanello,
B. Gallas,
Xijin Ge,
D. Megherbi,
W. Symmans,
May D. Wang,
John Zhang,
H. Bitter,
B. Brors,
P. Bushel,
M. Bylesjo,
Minjun Chen,
Jie Cheng,
Jing Cheng,
J. Chou,
T. Davison,
M. Delorenzi,
Youping Deng,
V. Devanarayan,
D. Dix,
J. Dopazo,
Kevin C. Dorff,
Fathi Elloumi,
Jianqing Fan,
Shicai Fan,
Xiaohui Fan,
H. Fang,
Nina Gonzaludo,
K. Hess,
H. Hong,
Jun Huan,
R. Irizarry,
R. Judson,
D. Juraeva,
S. Lababidi,
Christophe Gerard Lambert,
Li Li,
Yanen Li,
Zhen Li,
Simon M Lin,
Guozhen Liu,
E. Lobenhofer,
Jun Luo,
Wen-da Luo,
M. Mccall,
Y. Nikolsky,
G. Pennello,
R. Perkins,
Reena Philip,
V. Popovici,
N. Price,
F. Qian,
A. Scherer,
Tieliu Shi,
W. Shi,
J. Sung,
D. Thierry-Mieg,
J. Thierry-Mieg,
V. Thodima,
J. Trygg,
Lakshmi Vishnuvajjala,
Sue-Jane Wang,
Jianping Wu,
Yichao Wu,
Q. Xie,
W. Yousef,
Liang Zhang,
Xuegong Zhang,
Sheng Zhong,
Yi-ming Zhou,
Sheng Zhu,
D. Arasappan,
Wenjun Bao,
A. Lucas,
F. Berthold,
R. Brennan,
A. Buness,
Jennifer G. Catalano,
Chang Chang,
Rong Chen,
Yiyu Cheng,
Jian Cui,
W. Czika,
F. Demichelis,
Xutao Deng,
D. Dosymbekov,
R. Eils,
Yang Feng,
J. Fostel,
S. Fulmer-Smentek,
J. Fuscoe,
L. Gatto,
W. Ge,
D. Goldstein,
Li Guo,
D. Halbert,
Jing Han,
Stephen C. Harris,
C. Hatzis,
Damir Herman,
Jianping Huang,
R. Jensen,
Rui Jiang,
Charles D. Johnson,
Giuseppe Jurman,
Y. Kahlert,
S. Khuder,
M. Kohl,
Jianying Li,
Meng-long Li,
Quan-Zhen Li,
Shao-lin Li,
Zhiguang Li,
Jie Liu,
Y. Liu,
Zhichao Liu,
Lu Meng,
M. Madera,
F. Martínez-Murillo,
Ignacio Medina,
J. Meehan,
K. Miclaus,
R. Moffitt,
D. Montaner,
P. Mukherjee,
G. Mulligan,
Padraic Neville,
T. Nikolskaya,
B. Ning,
G. Page,
J. Parker,
R. M. Parry,
X. Peng,
Ron L. Peterson,
J. Phan,
Brian Quanz,
Yi Ren,
S. Riccadonna,
A. Roter,
F. Samuelson,
Martin M. Schumacher,
J. Shambaugh,
Q. Shi,
R. Shippy,
Shengzhu Si,
Aaron M. Smalter,
C. Sotiriou,
Mat Soukup,
F. Staedtler,
Guido Steiner,
Todd H. Stokes,
Qinglan Sun,
Pei-Yi Tan,
Rong Tang,
Z. Tezak,
B. Thorn,
M. Tsyganova,
Y. Turpaz,
S. Vega,
R. Visintainer,
J. von Frese,
Charles Wang,
Eric Wang,
Junwei Wang,
Wei Wang,
F. Westermann,
J. Willey,
M. Woods,
Shujian Wu,
N. Xiao,
Joshua Xu,
Lei Xu,
Lun Yang,
Xia Zeng,
Jialu Zhang,
L. Zhang,
Min Zhang,
Chen Zhao,
R. Puri,
U. Scherf,
W. Tong,
R. Wolfinger
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9 |
2010 |
9
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CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
428 auth.
Shantanu Jain,
C. Bakolitsa,
Stephen Brenner,
P. Radivojac,
J. Moult,
Susanna Repo,
R. Hoskins,
Gaia Andreoletti,
Daniel Barsky,
Ajithavalli Chellapan,
Hoyin Chu,
Navya Dabbiru,
Naveen K. Kollipara,
Melissa Ly,
Andrew J. Neumann,
...
Lipika R. Pal,
Eric Odell,
Gaurav Pandey,
Robin C. Peters-Petrulewicz,
Rajgopal Srinivasan,
Stephen F. Yee,
S. Yeleswarapu,
Maya Zuhl,
Ogun Adebali,
Ayoti Patra,
Michael A. Beer,
R. Hosur,
Jian Peng,
Brady M. Bernard,
Michael Berry,
Shengcheng Dong,
Alan P. Boyle,
Aashish Adhikari,
Jingqi Chen,
Zhiqiang Hu,
Robert Wang,
Yaqiong Wang,
Maximilian Miller,
Yanran Wang,
Yana Bromberg,
Paola Turina,
E. Capriotti,
James J. Han,
Kivilcim Ozturk,
Hannah Carter,
G. Babbi,
S. Bovo,
Pietro Di Lena,
P. Martelli,
Castrense Savojardo,
R. Casadio,
M. S. Cline,
Greet De Baets,
S. Bonache,
O. Díez,
S. Gutiérrez‐Enríquez,
Alejandro Fernández,
G. Montalban,
Lars Ootes,
Selen Özkan,
Natália Padilla,
Casandra Riera,
Xavier de la Cruz,
M. Diekhans,
Peter J. Huwe,
Qiong Wei,
Qifang Xu,
Roland L. Dunbrack,
Valer Gotea,
L. Elnitski,
Gennady Margolin,
P. Fariselli,
I. Kulakovskiy,
V. Makeev,
Dmitry D. Penzar,
I. Vorontsov,
A. Favorov,
Julia R. Forman,
Marcia Hasenahuer,
M. Fornasari,
Gustavo Parisi,
Žiga Avsec,
M. H. Çelik,
Thi Yen Duong Nguyen,
Julien Gagneur,
Fang-Yuan Shi,
Matthew D. Edwards,
Yuchun Guo,
Kevin Tian,
Haoyang Zeng,
David K. Gifford,
Jonathan Göke,
J. Zaucha,
Julian Gough,
G. R. S. Ritchie,
A. Frankish,
Jonathan M. Mudge,
Jen Harrow,
Erin L. Young,
Yao Yu,
Chad D. Huff,
Katsuhiko Murakami,
Yoko Nagai,
Tadashi Imanishi,
Christopher J. Mungall,
Julius O. B. Jacobsen,
Dongsup Kim,
Chan-Seok Jeong,
David Jones,
Mulin Jun Li,
V. Guthrie,
Rohit Bhattacharya,
Yun-Ching Chen,
C. Douville,
Jean Fan,
Dewey Kim,
David L. Masica,
N. Niknafs,
Sohini Sengupta,
Collin J Tokheim,
Tychele N. Turner,
Hui Ting Grace Yeo,
R. Karchin,
Sunyoung Shin,
Rene Welch,
Sunduz Keles,
Yue Li,
M. Kellis,
Carles Corbi-Verge,
Alexey Strokach,
Philip M. Kim,
Teri E. Klein,
Rahul Mohan,
Nicholas A. Sinnott-Armstrong,
Michael Wainberg,
A. Kundaje,
Nina Gonzaludo,
Angel C. Y. Mak,
A. Chhibber,
Hugo Y. K. Lam,
Dvir Dahary,
Simon Fishilevich,
Doron Lancet,
Insuk Lee,
Benjamin Bachman,
Panagiotis Katsonis,
R. Lua,
Stephen J. Wilson,
Olivier Lichtarge,
R. R. Bhat,
Laksshman Sundaram,
Vivek Viswanath,
Riccardo Bellazzi,
G. Nicora,
Ettore Rizzo,
I. Limongelli,
Aziz M. Mezlini,
Ray Chang,
Serra Kim,
Carmen Lai,
Robert O'Connor,
Scott Topper,
Jeroen van den Akker,
Alicia Y. Zhou,
Anjali D. Zimmer,
G. Mishne,
Timothy Bergquist,
Marcus R. Breese,
Rafael F. Guerrero,
Yuxiang Jiang,
Nikki Kiga,
Biao Li,
M. Mort,
K. Pagel,
V. Pejaver,
Moses H. Stamboulian,
J. Thusberg,
Sean D. Mooney,
Nuttinee Teerakulkittipong,
Chen Cao,
Kunal Kundu,
Yizhou Yin,
Chen-Hsin Yu,
Michael Kleyman,
Chiao-Feng Lin,
M. Stackpole,
Steve Mount,
Gökçen Eraslan,
Nikola S. Mueller,
Tatsuhiko Naito,
Aliz R. Rao,
J. R. Azaria,
Aharon Brodie,
Yanay Ofran,
Aditi Garg,
Debnath Pal,
Alex Hawkins-Hooker,
Henry Kenlay,
John Reid,
Eliseos J. Mucaki,
Peter K. Rogan,
Jana M. Schwarz,
D. Searls,
Gyu Rie Lee,
Chaok Seok,
Andreas Krämer,
Sohela Shah,
ChengLai V. Huang,
Jack F. Kirsch,
Maxim Shatsky,
Yue Cao,
Haoran Chen,
Mostafa Karimi,
Oluwaseyi Moronfoye,
Yuanfei Sun,
Yang Shen,
Ron Shigeta,
Colby T. Ford,
Conor Nodzak,
Aneeta Uppal,
Xinghua Shi,
Thomas Joseph,
Sujatha Kotte,
Sadhna Rana,
Aditya Rao,
V. Saipradeep,
N. Sivadasan,
Uma Sunderam,
Mario Stanke,
Andrew Su,
Ivan Adzhubey,
Daniel M. Jordan,
S. Sunyaev,
F. Rousseau,
J. Schymkowitz,
Joost van Durme,
S. Tavtigian,
Marco Carraro,
Manuel Giollo,
Silvio C. E. Tosatto,
Orit Adato,
Liran Carmel,
Noa E. Cohen,
Tzila Fenesh,
Tamar Holtzer,
T. Juven-Gershon,
Ron Unger,
Abhishek Niroula,
Ayodeji Olatubosun,
J. Väliaho,
Yang Yang,
Mauno Vihinen,
Mary E. Wahl,
Billy Chang,
Ka Chun Chong,
Inchi Hu,
Rui Sun,
William Ka Kei Wu,
Xiaoxuan Xia,
B. C. Zee,
M. H. Wang,
Meng Wang,
Chunlei Wu,
Yutong Lu,
Ken Chen,
Yuedong Yang,
Christopher M. Yates,
Anat Kreimer,
Zhongxia Yan,
N. Yosef,
Huying Zhao,
Zhipeng Wei,
Zhaomin Yao,
Fengfeng Zhou,
Lukas Folkman,
Yaoqi Zhou,
Roxana Daneshjou,
Russ Altman,
Fumitaka Inoue,
N. Ahituv,
Adam P. Arkin,
Federica Lovisa,
Paolo Bonvini,
Sarah Bowdin,
S. Gianni,
E. Mantuano,
V. Minicozzi,
L. Novak,
A. Pasquo,
Annalisa Pastore,
Maria Petrosino,
Rita Puglisi,
A. Toto,
L. Veneziano,
R. Chiaraluce,
Mad P. Ball,
Jason R. Bobe,
George M. Church,
Valerio Consalvi,
David N. Cooper,
Bethany A Buckley,
Molly B. Sheridan,
Garry R. Cutting,
M. Scaini,
Kamil J. Cygan,
Alger M. Fredericks,
David T. Glidden,
Christopher Neil,
Christy L Rhine,
William G. Fairbrother,
A. Alontaga,
Aron W. Fenton,
Kenneth A. Matreyek,
Lea M. Starita,
Douglas M. Fowler,
B. Löscher,
Andre Franke,
Scott I. Adamson,
B. Graveley,
Joe W. Gray,
M. Malloy,
John P. Kane,
M. Kousi,
Nicholas Katsanis,
Max Schubach,
Martin Kircher,
Paul L. F. Tang,
Pui-Yan Kwok,
Richard H. Lathrop,
W. Clark,
G. K. Yu,
Jonathan H. LeBowitz,
F. Benedicenti,
Elisa Bettella,
Stefania Bigoni,
Federica Cesca,
Isabella Mammi,
Cristina Marino-Buslje,
Donatella Milani,
Angela Peron,
R. Polli,
Stefano Sartori,
F. Stanzial,
I. Toldo,
L. Turolla,
M. C. Aspromonte,
Mariagrazia Bellini,
E. Leonardi,
Xiaoming Liu,
Christian Marshall,
W. R. McCombie,
L. Elefanti,
Chiara Menin,
M. Meyn,
Alessandra Murgia,
Kari C. Y. Nadeau,
S. Neuhausen,
Robert L. Nussbaum,
Mehdi Pirooznia,
J. Potash,
Dago F. Dimster-Denk,
J. Rine,
Jeremy R. Sanford,
Michael Snyder,
Atina G. Coté,
Song Sun,
Marta Verby,
Jochen Weile,
Frederick P. Roth,
R. Tewhey,
P. Sabeti,
Joan Campagna,
Marwan M. Refaat,
Julianne Wojciak,
Soren Grubb,
Nicole Schmitt,
Jay Shendure,
A. Spurdle,
Dimitri J. Stavropoulos,
Nephi A. Walton,
Peter P. Zandi,
Elad Ziv,
Wylie Burke,
Flavia Chen,
Lawrence R. Carr,
Selena Martinez,
Jodi Paik,
Julie N. Harris-Wai,
Mark Yarborough,
Stephanie M. Fullerton,
Barbara A. Koenig,
Gregory McInnes,
Dustin Shigaki,
J. Chandonia,
Mabel Furutsuki,
Laura Kasak,
Changhua Yu,
Rui Chen,
Iddo Friedberg,
Gaddy Getz,
Qian Cong,
L. Kinch,
Jing Zhang,
Nick V. Grishin,
A. Voskanian,
M. Kann,
Elizabeth Tran,
Nilah M. Ioannidis,
Jesse M. Hunter,
Rupa Udani,
Binghuang Cai,
Alexander A. Morgan,
Artem Sokolov,
Joshua M. Stuart,
Giovanni Minervini,
A. M. Monzon,
S. Batzoglou,
A. Butte,
Marc S. Greenblatt,
Reece K. Hart,
Ryan Hernandez,
Tim J. P. Hubbard,
Scott Kahn,
A. O’Donnell-Luria,
Pauline C Ng,
John Shon,
J. Veltman,
J. Zook
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5 |
2022 |
5
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