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Whole-genome analyses resolve early branches in the tree of life of modern birds
105 auth.
E. Jarvis,
S. Mirarab,
A. Aberer,
Bo Li,
P. Houde,
Cai Li,
S. Ho,
B. Faircloth,
B. Nabholz,
Jason T. Howard,
Alexander Suh,
Claudia C. Weber,
R. D. da Fonseca,
Jianwen Li,
Fang Zhang,
...
Hui Li,
Long Zhou,
Nitish Narula,
Liang Liu,
Ganeshkumar Ganapathy,
B. Boussau,
Md. Shamsuzzoha Bayzid,
Volodymyr Zavidovych,
Sankar Subramanian,
T. Gabaldón,
S. Capella-Gutiérrez,
J. Huerta-Cepas,
Bhanu Rekepalli,
Kasper Munch,
M. Schierup,
B. Lindow,
W. Warren,
D. Ray,
R. Green,
M. Bruford,
Xiangjiang Zhan,
A. Dixon,
Shengbin Li,
Ning Li,
Yinhua Huang,
E. Derryberry,
M. Bertelsen,
F. Sheldon,
R. T. Brumfield,
C. Mello,
P. Lovell,
Morgan E. Wirthlin,
M. Schneider,
F. Prosdocimi,
J. A. Samaniego,
A. M. V. Velazquez,
Alonzo Alfaro-Núñez,
P. Campos,
Bent Petersen,
Thomas Sicheritz-Pontén,
A. Pas,
T. Bailey,
P. Scofield,
M. Bunce,
D. Lambert,
Qi Zhou,
P. Perelman,
A. Driskell,
B. Shapiro,
Zijun Xiong,
Yongli Zeng,
Shiping Liu,
Zhenyu Li,
Binghang Liu,
Kui Wu,
Jin Xiao,
Xiong Yinqi,
Qiu-hong Zheng,
Yong Zhang,
Huanming Yang,
Jian Wang,
Linnéa Smeds,
F. Rheindt,
M. Braun,
J. Fjeldså,
L. Orlando,
F. Barker,
K. Jønsson,
W. Johnson,
Klaus‐Peter Koepfli,
S. O’Brien,
D. Haussler,
O. Ryder,
C. Rahbek,
E. Willerslev,
G. Graves,
T. Glenn,
J. McCormack,
D. Burt,
H. Ellegren,
P. Alström,
S. Edwards,
A. Stamatakis,
D. Mindell,
J. Cracraft,
E. Braun,
T. Warnow,
Wang Jun,
M. Gilbert,
Guojie Zhang
|
10 |
2014 |
10
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The genome of a songbird
82 auth.
W. Warren,
D. F. Clayton,
H. Ellegren,
A. Arnold,
L. Hillier,
Axel Künstner,
S. Searle,
S. White,
Albert J. Vilella,
S. Fairley,
A. Heger,
Lesheng Kong,
C. Ponting,
E. Jarvis,
C. Mello,
...
P. Minx,
P. Lovell,
T. Velho,
Margaret Ferris,
C. N. Balakrishnan,
S. Sinha,
Charles A. Blatti,
Sarah E. London,
Yun Li,
Ya-Chi Lin,
J. George,
J. Sweedler,
B. Southey,
P. Gunaratne,
M. Watson,
Kiwoong Nam,
N. Backström,
Linnéa Smeds,
B. Nabholz,
Y. Itoh,
O. Whitney,
Andreas R. Pfenning,
Jason T. Howard,
M. Völker,
Bejamin M. Skinner,
D. Griffin,
Liang Ye,
W. McLaren,
P. Flicek,
V. Quesada,
G. Velasco,
C. López-Otín,
X. Puente,
T. Olender,
D. Lancet,
A. Smit,
R. Hubley,
Miriam K. Konkel,
Jerilyn A. Walker,
M. Batzer,
W. Gu,
D. Pollock,
Lin Chen,
Ze Cheng,
E. Eichler,
J. Stapley,
J. Slate,
R. Ekblom,
T. Birkhead,
T. Burke,
D. Burt,
C. Scharff,
I. Adam,
Hugues Richard,
M. Sultan,
A. Soldatov,
H. Lehrach,
S. Edwards,
Shiaw-Pyng Yang,
XiaoChing Li,
Tina Graves,
L. Fulton,
J. Nelson,
A. Chinwalla,
Shunfeng Hou,
E. Mardis,
R. Wilson
|
9 |
2010 |
9
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The genomic landscape of species divergence in Ficedula flycatchers
12 auth.
H. Ellegren,
Linnéa Smeds,
R. Burri,
Pall I. Olason,
N. Backström,
T. Kawakami,
...
Axel Künstner,
H. Mäkinen,
K. Nadachowska-Brzyska,
A. Qvarnström,
Severin Uebbing,
J. Wolf
|
9 |
2012 |
9
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Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers
18 auth.
R. Burri,
A. Nater,
T. Kawakami,
C. Mugal,
Pall I. Olason,
Linnéa Smeds,
Alexander Suh,
L. Dutoit,
S. Bureš,
L. Garamszegi,
...
Silje Hogner,
J. Moreno,
A. Qvarnström,
M. Ruzic,
S. Sæther,
Glenn-Peter Sætre,
J. Török,
H. Ellegren
|
8 |
2015 |
8
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The Dynamics of Incomplete Lineage Sorting across the Ancient Adaptive Radiation of Neoavian Birds
Alexander Suh,
Linnéa Smeds,
H. Ellegren
|
7 |
2015 |
7
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ConDeTri - A Content Dependent Read Trimmer for Illumina Data
Linnéa Smeds,
Axel Künstner
|
7 |
2011 |
7
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PSMC analysis of effective population sizes in molecular ecology and its application to black‐and‐white Ficedula flycatchers
K. Nadachowska-Brzyska,
R. Burri,
Linnéa Smeds,
H. Ellegren
|
7 |
2016 |
7
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|
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Temporal Dynamics of Avian Populations during Pleistocene Revealed by Whole-Genome Sequences
K. Nadachowska-Brzyska,
Cai Li,
Linnéa Smeds,
Guojie Zhang,
H. Ellegren
|
7 |
2015 |
7
🐬
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|
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A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution
8 auth.
T. Kawakami,
Linnéa Smeds,
N. Backström,
A. Husby,
A. Qvarnström,
C. Mugal,
...
Pall I. Olason,
H. Ellegren
|
7 |
2014 |
7
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|
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Direct estimate of the rate of germline mutation in a bird
Linnéa Smeds,
A. Qvarnström,
H. Ellegren
|
7 |
2016 |
7
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|
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Demographic Divergence History of Pied Flycatcher and Collared Flycatcher Inferred from Whole-Genome Re-sequencing Data
K. Nadachowska-Brzyska,
R. Burri,
Pall I. Olason,
T. Kawakami,
Linnéa Smeds,
H. Ellegren
|
6 |
2013 |
6
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Evolutionary analysis of the female-specific avian W chromosome
17 auth.
Linnéa Smeds,
Vera M. Warmuth,
Paulina Bolívar,
Severin Uebbing,
R. Burri,
Alexander Suh,
A. Nater,
S. Bureš,
L. Garamszegi,
Silje Hogner,
...
J. Moreno,
A. Qvarnström,
M. Ruzic,
S. Sæther,
Glenn-Peter Sætre,
J. Török,
H. Ellegren
|
6 |
2015 |
6
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