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🦁
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Bioconductor: open software development for computational biology and bioinformatics
25 auth.
R. Gentleman,
V. Carey,
D. Bates,
B. Bolstad,
M. Dettling,
S. Dudoit,
B. Ellis,
L. Gautier,
Yongchao Ge,
Jeff Gentry,
K. Hornik,
T. Hothorn,
W. Huber,
S. Iacus,
R. Irizarry,
...
F. Leisch,
Cheng Li,
M. Maechler,
A. Rossini,
G. Sawitzki,
Colin Smith,
Gordon Smyth,
L. Tierney,
J. Y. Yang,
Jianhua Zhang
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13 |
2004 |
13
🦁
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🐜
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Circulating microRNAs as stable blood-based markers for cancer detection
20 auth.
P. S. Mitchell,
R. K. Parkin,
E. Kroh,
B. Fritz,
S. Wyman,
E. Pogosova‐Agadjanyan,
Amelia C. Peterson,
J. Noteboom,
K. O'Briant,
A. Allen,
...
D. Lin,
N. Urban,
C. Drescher,
B. Knudsen,
Derek L. Stirewalt,
R. Gentleman,
R. Vessella,
P. Nelson,
Daniel B. Martin,
M. Tewari
|
12 |
2008 |
12
🐜
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🐜
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Software for Computing and Annotating Genomic Ranges
8 auth.
Michael F. Lawrence,
W. Huber,
Hervé Pagès,
Patrick Aboyoun,
Marc Carlson,
R. Gentleman,
...
Martin T. Morgan,
V. Carey
|
11 |
2013 |
11
🐜
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🐜
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Orchestrating high-throughput genomic analysis with Bioconductor
26 auth.
W. Huber,
V. Carey,
R. Gentleman,
S. Anders,
Marc Carlson,
B. Carvalho,
H. C. Bravo,
Sean R. Davis,
L. Gatto,
T. Girke,
R. Gottardo,
F. Hahne,
K. Hansen,
R. Irizarry,
Michael Lawrence,
...
M. Love,
James MacDonald,
Valerie Obenchain,
Andrzej K. Oles,
Hervé Pagès,
Alejandro Reyes,
P. Shannon,
G. Smyth,
Dan Tenenbaum,
L. Waldron,
Martin T. Morgan
|
11 |
2015 |
11
🐜
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🐜
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gplots: Various R Programming Tools for Plotting Data
23 auth.
G. Warnes,
B. Bolker,
L. Bonebakker,
R. Gentleman,
Wha Liaw,
T. Lumley,
M. Maechler,
A. Magnusson,
S. Moeller,
Michael L. Schwartz,
...
B. Venables,
W. Huber,
Andy Liaw,
R. Gregory,
BB Warnes,
L. Bonebakker,
Wolfgang Huber Andy Liaw,
T. Lumley,
M. Maechler,
A. Magnusson,
S. Moeller,
Marc Schwartz,
B. Venables
|
11 |
2015 |
11
🐜
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🦁
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Bioinformatics and Computational Biology Solutions Using R and Bioconductor
R. Gentleman
|
10 |
2006 |
10
🦁
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🐬
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A Model-Based Background Adjustment for Oligonucleotide Expression Arrays
Zhijin Wu,
R. Irizarry,
R. Gentleman,
F. Martínez-Murillo,
Forrest Spencer
|
10 |
2004 |
10
🐬
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🐜
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Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer
37 auth.
C. Rudin,
S. Durinck,
E. Stawiski,
J. Poirier,
Z. Modrusan,
D. Shames,
E. Bergbower,
Y. Guan,
James Shin,
Joseph Guillory,
Celina Sanchez Rivers,
C. Foo,
Deepali Bhatt,
Jeremy Stinson,
Florian Gnad,
...
Peter M. Haverty,
R. Gentleman,
Subhra Chaudhuri,
V. Janakiraman,
B. Jaiswal,
C. Parikh,
Wenlin Yuan,
Zemin Zhang,
H. Koeppen,
Thomas D. Wu,
H. Stern,
R. Yauch,
K. Huffman,
D. D. Paskulin,
P. Illei,
M. Varella-Garcia,
A. Gazdar,
F. Sauvage,
R. Bourgon,
J. Minna,
M. Brock,
S. Seshagiri
|
9 |
2012 |
9
🐜
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🐜
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Recurrent R-spondin fusions in colon cancer
27 auth.
S. Seshagiri,
E. Stawiski,
S. Durinck,
Z. Modrusan,
E. Storm,
C. Conboy,
Subhra Chaudhuri,
Y. Guan,
V. Janakiraman,
B. Jaiswal,
Joseph Guillory,
Connie Ha,
G. Dijkgraaf,
Jeremy Stinson,
Florian Gnad,
...
Melanie A. Huntley,
Jeremiah D. Degenhardt,
Peter M. Haverty,
R. Bourgon,
Weiru Wang,
H. Koeppen,
R. Gentleman,
T. Starr,
Zemin Zhang,
D. Largaespada,
Thomas D. Wu,
F. Sauvage
|
9 |
2012 |
9
🐜
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🐜
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Recurrent R-spondin fusions in colon cancer
27 auth.
S. Seshagiri,
E. Stawiski,
S. Durinck,
Z. Modrusan,
E. Storm,
C. Conboy,
Subhra Chaudhuri,
Y. Guan,
V. Janakiraman,
B. Jaiswal,
Joseph Guillory,
Connie Ha,
G. Dijkgraaf,
Jeremy Stinson,
Florian Gnad,
...
Melanie A. Huntley,
Jeremiah D. Degenhardt,
Peter M. Haverty,
R. Bourgon,
Weiru Wang,
H. Koeppen,
R. Gentleman,
T. Starr,
Zemin Zhang,
D. Largaespada,
Thomas D. Wu,
F. Sauvage
|
9 |
2012 |
9
🐜
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🐬
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Independent filtering increases detection power for high-throughput experiments
R. Bourgon,
R. Gentleman,
W. Huber
|
9 |
2010 |
9
🐬
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🐜
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A comprehensive transcriptional portrait of human cancer cell lines
30 auth.
C. Klijn,
S. Durinck,
E. Stawiski,
Peter M. Haverty,
Zhaoshi Jiang,
Hanbin Liu,
Jeremiah D. Degenhardt,
Oleg Mayba,
Florian Gnad,
Jinfeng Liu,
Grégoire Pau,
Jens Reeder,
Yi Cao,
K. Mukhyala,
S. Selvaraj,
...
Mamie Yu,
Gregory J. Zynda,
Matthew J. Brauer,
Thomas D. Wu,
R. Gentleman,
G. Manning,
R. Yauch,
R. Bourgon,
D. Stokoe,
Z. Modrusan,
R. Neve,
F. D. de Sauvage,
J. Settleman,
S. Seshagiri,
Zemin Zhang
|
9 |
2014 |
9
🐜
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🐢
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flowCore: a Bioconductor package for high throughput flow cytometry
9 auth.
F. Hahne,
N. LeMeur,
R. Brinkman,
B. Ellis,
P. Haaland,
D. Sarkar,
...
Josef Spidlen,
E. Strain,
R. Gentleman
|
9 |
2009 |
9
🐢
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🐜
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The mutation spectrum revealed by paired genome sequences from a lung cancer patient
27 auth.
William Lee,
Zhaoshi Jiang,
Jinfeng Liu,
Peter M. Haverty,
Y. Guan,
Jeremy Stinson,
Peng Yue,
Yan Zhang,
K. Pant,
Deepali Bhatt,
Connie Ha,
Stephanie Johnson,
M. Kennemer,
S. Mohan,
Igor Nazarenko,
...
C. Watanabe,
A. Sparks,
D. Shames,
R. Gentleman,
F. Sauvage,
H. Stern,
A. Pandita,
D. Ballinger,
R. Drmanac,
Z. Modrusan,
S. Seshagiri,
Zemin Zhang
|
9 |
2010 |
9
🐜
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🐜
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Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.
12 auth.
Yi Cao,
Zizhen Yao,
D. Sarkar,
Michael Lawrence,
Gilson J Sanchez,
M. Parker,
...
K. MacQuarrie,
J. Davison,
Martin Morgan,
W. L. Ruzzo,
R. Gentleman,
S. Tapscott
|
8 |
2010 |
8
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