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🐜
|
Integrated Genomic Analyses of Ovarian Carcinoma
262 auth.
D. Bell,
A. Berchuck,
M. Birrer,
J. Chien,
D. Cramer,
F. Dao,
R. Dhir,
P. Disaia,
H. Gabra,
Pat Glenn,
A. Godwin,
J. Gross,
L. Hartmann,
M. Huang,
D. Huntsman,
...
M. Iacocca,
M. Imieliński,
S. Kalloger,
B. Karlan,
D. Levine,
G. Mills,
C. Morrison,
D. Mutch,
Narciso Olvera,
S. Orsulic,
K. Park,
N. Petrelli,
B. Rabeno,
J. Rader,
B. Sikic,
K. Smith-McCune,
A. Sood,
D. Bowtell,
R. Penny,
J. Testa,
K. Chang,
H. Dinh,
J. Drummond,
G. Fowler,
P. Gunaratne,
A. Hawes,
C. Kovar,
L. Lewis,
M. Morgan,
I. Newsham,
J. Santibanez,
J. Reid,
L. Treviño,
Y. Wu,
M. Wang,
D. Muzny,
D. Wheeler,
R. Gibbs,
G. Getz,
M. Lawrence,
K. Cibulskis,
A. Sivachenko,
C. Sougnez,
Douglas Voet,
Jane Wilkinson,
Toby Bloom,
K. Ardlie,
T. Fennell,
J. Baldwin,
S. Gabriel,
E. Lander,
L. Ding,
R. Fulton,
D. Koboldt,
M. McLellan,
T. Wylie,
Jason R. Walker,
M. O'Laughlin,
D. Dooling,
L. Fulton,
R. Abbott,
N. Dees,
Q. Zhang,
C. Kandoth,
M. Wendl,
W. Schierding,
D. Shen,
C. Harris,
H. Schmidt,
Joelle Kalicki,
K. Delehaunty,
C. Fronick,
Ryan T. Demeter,
L. Cook,
J. Wallis,
L. Lin,
V. Magrini,
J. Hodges,
James M. Eldred,
S. M. Smith,
C. Pohl,
Fabio Vandin,
Benjamin J. Raphael,
G. Weinstock,
E. Mardis,
R. Wilson,
M. Meyerson,
W. Winckler,
R. Verhaak,
Suzie Carter,
C. Mermel,
G. Saksena,
H. Nguyen,
R. Onofrio,
D. Hubbard,
S. Gupta,
A. Crenshaw,
A. Ramos,
L. Chin,
A. Protopopov,
Juinhua Zhang,
T. Kim,
I. Perna,
Y. Xiao,
Hailei Zhang,
G. Ren,
N. Sathiamoorthy,
R. Park,
E. Lee,
P. Park,
R. Kucherlapati,
D. Absher,
L. Waite,
G. Sherlock,
J. Brooks,
Jun Li,
Jin Xu,
R. Myers,
P. Laird,
L. Cope,
J. Herman,
Hui Shen,
D. Weisenberger,
H. Noushmehr,
F. Pan,
T. Triche,
B. Berman,
D. V. Berg,
J. Buckley,
S. Baylin,
P. Spellman,
E. Purdom,
P. Neuvial,
H. Bengtsson,
L. Jakkula,
S. Durinck,
J. Han,
S. Dorton,
H. Marr,
Y. Choi,
V. Wang,
Ninghai Wang,
J. Ngai,
J. Conboy,
B. Parvin,
H. Feiler,
T. Speed,
J. Gray,
N. Socci,
Yanke Liang,
B. Taylor,
N. Schultz,
L. Borsu,
A. Lash,
C. Brennan,
A. Viale,
C. Sander,
M. Ladanyi,
K. Hoadley,
S. Meng,
Y. Du,
Yufeng Shi,
Lulin Li,
Y. Turman,
D. Zang,
E. Helms,
S. Balu,
X. Zhou,
Jinhua Wu,
M. D. Topal,
D. Hayes,
C. Perou,
Jun Zhang,
Chaowei Wu,
S. Shukla,
A. Sivachenko,
R. Jing,
Yueh-Feng Liu,
M. Noble,
H. Carter,
D. Kim,
R. Karchin,
J. Korkola,
Laura M. Heiser,
R. Cho,
Zhihao Hu,
E. Cerami,
A. Olshen,
B. Reva,
Yevgeniy Antipin,
R. Shen,
P. Mankoo,
R. Sheridan,
G. Ciriello,
William K. Chang,
J. Bernanke,
D. Haussler,
C. Benz,
Joshua M. Stuart,
S. Benz,
J. Z. Sanborn,
Charles J. Vaske,
Jiangyu Zhu,
C. Szeto,
G. Scott,
C. Yau,
M. Wilkerson,
N. Zhang,
Rehan Akbani,
K. Baggerly,
W. Yung,
J. Weinstein,
T. Shelton,
D. Grimm,
M. Hatfield,
S. Morris,
P. Yena,
P. Rhodes,
M. Sherman,
J. Paulauskis,
S. Millis,
A. Kahn,
J. Greene,
R. Sfeir,
M. Jensen,
James K. Chen,
J. Whitmore,
S. Alonso,
J. Jordan,
A. Chu,
Jinghui Zhang,
A. Barker,
C. Compton,
G. Eley,
M. Ferguson,
P. Fielding,
D. Gerhard,
R. Myles,
C. Schaefer,
K. Shaw,
J. Vaught,
J. Vockley,
P. Good,
M. Guyer,
B. Ozenberger,
James Peterson,
E. Thomson
|
12 |
2011 |
12
🐜
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|
🐜
|
Comprehensive genomic characterization defines human glioblastoma genes and core pathways
231 auth.
R. McLendon,
A. Friedman,
D. Bigner,
Erwin G. Van Meir,
D. Brat,
Gena M Mastrogianakis,
J. Olson,
T. Mikkelsen,
N. Lehman,
K. Aldape,
W. Yung,
O. Bogler,
J. Weinstein,
S. Vandenberg,
M. Berger,
...
M. Prados,
D. Muzny,
M. Morgan,
S. Scherer,
A. Sabo,
L. Nazareth,
L. Lewis,
O. Hall,
Yiming Zhu,
Yanru Ren,
Omar Alvi,
Jiqiang Yao,
A. Hawes,
S. Jhangiani,
G. Fowler,
A. Lucas,
C. Kovar,
Andrew Cree,
H. Dinh,
J. Santibanez,
Vandita Joshi,
M. Gonzalez-Garay,
Christopher A. Miller,
A. Milosavljevic,
L. Donehower,
D. Wheeler,
R. Gibbs,
K. Cibulskis,
C. Sougnez,
T. Fennell,
Scott Mahan,
Jane Wilkinson,
L. Ziaugra,
R. Onofrio,
Toby Bloom,
R. Nicol,
K. Ardlie,
J. Baldwin,
S. Gabriel,
E. Lander,
L. Ding,
R. Fulton,
M. McLellan,
J. Wallis,
D. Larson,
Xiaoqi Shi,
R. Abbott,
L. Fulton,
Ken Chen,
D. Koboldt,
M. Wendl,
R. Meyer,
Yuzhu Tang,
Ling Lin,
John R. Osborne,
Brian H. Dunford-Shore,
T. Miner,
K. Delehaunty,
C. Markovic,
Gary W. Swift,
W. Courtney,
C. Pohl,
S. Abbott,
Amy E. Hawkins,
Shin Leong,
C. Haipek,
Heather K. Schmidt,
M. Wiechert,
T. Vickery,
S. Scott,
D. Dooling,
A. Chinwalla,
G. Weinstock,
E. Mardis,
R. Wilson,
G. Getz,
W. Winckler,
R. Verhaak,
M. Lawrence,
Michael J. T. O’Kelly,
James Robinson,
Gabriele Alexe,
R. Beroukhim,
S. Carter,
Derek Y. Chiang,
Josh Gould,
Supriya Gupta,
Joshua M. Korn,
C. Mermel,
J. Mesirov,
S. Monti,
Huy L. Nguyen,
Melissa Parkin,
Michael Reich,
Nicolas Stransky,
B. Weir,
L. Garraway,
T. Golub,
M. Meyerson,
L. Chin,
A. Protopopov,
Jianhua Zhang,
I. Perna,
S. Aronson,
N. Sathiamoorthy,
Georgi Ren,
Jun Yao,
W. Wiedemeyer,
Hyun Soo Kim,
Won Kong Sek,
Yonghong Xiao,
I. Kohane,
J. Seidman,
P. Park,
R. Kucherlapati,
P. Laird,
L. Cope,
J. Herman,
D. Weisenberger,
F. Pan,
D. V. Berg,
L. V. Neste,
Mingyu Joo,
Kornel E. Schuebel,
S. Baylin,
D. Absher,
Jun Z. Li,
Audrey M. Southwick,
Shannon T. Brady,
A. Aggarwal,
Tisha Chung,
G. Sherlock,
J. Brooks,
R. Myers,
P. Spellman,
E. Purdom,
L. Jakkula,
A. Lapuk,
H. Marr,
S. Dorton,
Gi Choi Yoon,
Ju Han,
A. Ray,
V. Wang,
S. Durinck,
M. Robinson,
Nicholas J. Wang,
K. Vranizan,
V. Peng,
E. V. Name,
G. Fontenay,
J. Ngai,
J. Conboy,
B. Parvin,
H. Feiler,
T. Speed,
J. Gray,
C. Brennan,
N. Socci,
A. Olshen,
B. Taylor,
A. Lash,
N. Schultz,
B. Reva,
Yevgeniy Antipin,
Alexey Stukalov,
Benjamin E. Gross,
E. Cerami,
Qingqing Wei,
L. Qin,
V. Seshan,
L. Villafania,
Magali Cavatore,
L. Borsu,
A. Viale,
W. Gerald,
C. Sander,
M. Ladanyi,
C. Perou,
D. Hayes,
M. D. Topal,
K. Hoadley,
Yuan Qi,
S. Balu,
Yan Shi,
Junyuan Wu,
R. Penny,
M. Bittner,
T. Shelton,
E. Lenkiewicz,
S. Morris,
D. Beasley,
Sheri Sanders,
A. Kahn,
R. Sfeir,
Jessica Chen,
D. Nassau,
Larry Feng,
E. Hickey,
A. Barker,
D. Gerhard,
J. Vockley,
C. Compton,
J. Vaught,
P. Fielding,
M. Ferguson,
C. Schaefer,
Jinghui Zhang,
Subha Madhavan,
K. Buetow,
F. Collins,
P. Good,
M. Guyer,
B. Ozenberger,
Jane L. Peterson,
E. Thomson
|
12 |
2008 |
12
🐜
|
|
🦁
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Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
S. Durinck,
P. Spellman,
E. Birney,
W. Huber
|
11 |
2009 |
11
🦁
|
|
🦁
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BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
7 auth.
S. Durinck,
Y. Moreau,
A. Kasprzyk,
Sean Davis,
B. Moor,
A. Brazma,
...
W. Huber
|
10 |
2005 |
10
🦁
|
|
🐜
|
Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer
37 auth.
C. Rudin,
S. Durinck,
E. Stawiski,
J. Poirier,
Z. Modrusan,
D. Shames,
E. Bergbower,
Y. Guan,
James Shin,
Joseph Guillory,
Celina Sanchez Rivers,
C. Foo,
Deepali Bhatt,
Jeremy Stinson,
Florian Gnad,
...
Peter M. Haverty,
R. Gentleman,
Subhra Chaudhuri,
V. Janakiraman,
B. Jaiswal,
C. Parikh,
Wenlin Yuan,
Zemin Zhang,
H. Koeppen,
Thomas D. Wu,
H. Stern,
R. Yauch,
K. Huffman,
D. D. Paskulin,
P. Illei,
M. Varella-Garcia,
A. Gazdar,
F. Sauvage,
R. Bourgon,
J. Minna,
M. Brock,
S. Seshagiri
|
9 |
2012 |
9
🐜
|
|
🐜
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Recurrent R-spondin fusions in colon cancer
27 auth.
S. Seshagiri,
E. Stawiski,
S. Durinck,
Z. Modrusan,
E. Storm,
C. Conboy,
Subhra Chaudhuri,
Y. Guan,
V. Janakiraman,
B. Jaiswal,
Joseph Guillory,
Connie Ha,
G. Dijkgraaf,
Jeremy Stinson,
Florian Gnad,
...
Melanie A. Huntley,
Jeremiah D. Degenhardt,
Peter M. Haverty,
R. Bourgon,
Weiru Wang,
H. Koeppen,
R. Gentleman,
T. Starr,
Zemin Zhang,
D. Largaespada,
Thomas D. Wu,
F. Sauvage
|
9 |
2012 |
9
🐜
|
|
🐜
|
Abstract LB-331: Comprehensive genomic analysis of malignant pleural mesothelioma identifies recurrent mutations, gene fusions and splicing alterations
11 auth.
S. Seshagiri,
E. Stawiski,
L. Goldstein,
S. Durinck,
Z. Modrusan,
Florian Gnad,
...
Thong T. Nguyen,
B. Jaiswal,
A. Rienzo,
W. Richards,
R. Bueno
|
9 |
2016 |
9
🐜
|
|
🐜
|
The BioMart community portal: an innovative alternative to large, centralized data repositories
105 auth.
D. Smedley,
Syed Haider,
S. Durinck,
Luca Pandini,
P. Provero,
James E. Allen,
O. Arnaiz,
M. Awedh,
R. Baldock,
G. Barbiera,
P. Bardou,
Tim Beck,
Andrew Blake,
M. Bonierbale,
A. Brookes,
...
G. Bucci,
Iwan Buetti,
Sarah W. Burge,
Cédric Cabau,
J. Carlson,
C. Chelala,
C. Chrysostomou,
Davide Cittaro,
O. Collin,
R. Cordova,
R. Cutts,
E. Dassi,
A. Génova,
Anis Djari,
Anthony Esposito,
H. Estrella,
E. Eyras,
J. Fernandez-Banet,
S. Forbes,
R. Free,
Takatomo Fujisawa,
Emanuela Gadaleta,
J. Garcia-Manteiga,
D. Goodstein,
Kristian A. Gray,
J. A. Guerra-Assunção,
Bernard Haggarty,
Dongjin Han,
Byungwoo Han,
T. Harris,
J. Harshbarger,
R. Hastings,
Richard D. Hayes,
C. Hoede,
Shen Hu,
Zhi-Liang Hu,
L. Hutchins,
Zhengyan Kan,
H. Kawaji,
Aminah Keliet,
A. Kerhornou,
Sunghoon Kim,
R. Kinsella,
C. Klopp,
Lei Kong,
D. Lawson,
D. Lazarević,
Ji-Hyun Lee,
T. Letellier,
Chuan-Yun Li,
P. Lio’,
Chu-Jun Liu,
Jie Luo,
A. Maass,
J. Mariette,
Thomas Maurel,
S. Merella,
A. Mohamed,
François Moreews,
Nabihoudine Ibouniyamine,
N. Ndegwa,
Céline Noirot,
Christian Perez-Llamas,
M. Primig,
A. Quattrone,
H. Quesneville,
Davide Rambaldi,
J. Reecy,
M. Riba,
S. Rosanoff,
A. Saddiq,
E. Salas,
Olivier Sallou,
Rebecca Shepherd,
R. Simon,
L. Sperling,
W. Spooner,
D. Staines,
Delphine Steinbach,
Kevin R. Stone,
E. Stupka,
J. Teague,
A. D. Ullah,
Jun Wang,
D. Ware,
Marie Wong-Erasmus,
K. Youens-Clark,
A. Zadissa,
Shi-Jian Zhang,
A. Kasprzyk
|
9 |
2015 |
9
🐜
|
|
🐜
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A comprehensive transcriptional portrait of human cancer cell lines
30 auth.
C. Klijn,
S. Durinck,
E. Stawiski,
Peter M. Haverty,
Zhaoshi Jiang,
Hanbin Liu,
Jeremiah D. Degenhardt,
Oleg Mayba,
Florian Gnad,
Jinfeng Liu,
Grégoire Pau,
Jens Reeder,
Yi Cao,
K. Mukhyala,
S. Selvaraj,
...
Mamie Yu,
Gregory J. Zynda,
Matthew J. Brauer,
Thomas D. Wu,
R. Gentleman,
G. Manning,
R. Yauch,
R. Bourgon,
D. Stokoe,
Z. Modrusan,
R. Neve,
F. D. de Sauvage,
J. Settleman,
S. Seshagiri,
Zemin Zhang
|
9 |
2014 |
9
🐜
|
|
🐜
|
Supplementary Figure Legends
20 auth.
Wenlin Yuan,
E. Stawiski,
V. Janakiraman,
Emily Chan,
S. Durinck,
Noelyn M. Kljavin,
Celina Sanchez Rivers,
Florian Gnad,
M. R. Girma,
Peter M. Haverty,
...
G. Fedorowicz,
Sherry Heldens,
R. Soriano,
Zemin Zhang,
Jeffrey Wallin,
Leisa Johnson,
Mark Merchant,
Z. Modrusan,
H. Stern,
S. Seshagiri
|
9 |
2012 |
9
🐜
|
|
🐜
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Subtype and pathway specific responses to anticancer compounds in breast cancer
43 auth.
Laura M. Heiser,
A. Sadanandam,
W. Kuo,
S. Benz,
Theodore Goldstein,
S. Ng,
W. J. Gibb,
Nicholas J. Wang,
Safiyyah Ziyad,
F. Tong,
N. Bayani,
Zhi Hu,
Jessica I Billig,
Andrea Dueregger,
Sophia Lewis,
...
L. Jakkula,
J. Korkola,
S. Durinck,
F. Pépin,
Y. Guan,
E. Purdom,
P. Neuvial,
H. Bengtsson,
K. Wood,
Peter G. Smith,
L. Vassilev,
B. Hennessy,
J. Greshock,
K. Bachman,
M. A. Hardwicke,
John W. Park,
L. Marton,
D. Wolf,
E. Collisson,
R. Neve,
G. Mills,
T. Speed,
H. Feiler,
R. Wooster,
D. Haussler,
Joshua M. Stuart,
J. Gray,
P. Spellman
|
8 |
2011 |
8
🐜
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|
🐜
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Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.
46 auth.
P. Hilson,
J. Allemeersch,
T. Altmann,
S. Aubourg,
A. Avon,
J. Beynon,
R. Bhalerao,
F. Bitton,
M. Caboche,
Bernard Cannoot,
Vasil Chardakov,
Cécile Cognet-Holliger,
V. Colot,
M. Crowe,
C. Darimont,
...
S. Durinck,
H. Eickhoff,
Andéol Falcon de Longevialle,
E. Farmer,
M. Grant,
Martin Kuiper,
H. Lehrach,
Céline Léon,
A. Leyva,
J. Lundeberg,
C. Lurin,
Y. Moreau,
W. Nietfeld,
J. Paz-Ares,
P. Reymond,
P. Rouzé,
G. Sandberg,
Maria Dolores Segura,
Carine Serizet,
A. Tabrett,
L. Taconnat,
V. Thareau,
P. Van Hummelen,
Steven Vercruysse,
M. Vuylsteke,
M. Weingartner,
P. Weisbeek,
V. Wirta,
F. Wittink,
M. Zabeau,
I. Small
|
8 |
2004 |
8
🐜
|
|
🐜
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Oncogenic ERBB3 mutations in human cancers.
31 auth.
B. Jaiswal,
Noelyn M. Kljavin,
E. Stawiski,
E. Chan,
C. Parikh,
S. Durinck,
Subhra Chaudhuri,
Kanan D. Pujara,
Joseph Guillory,
K. Edgar,
V. Janakiraman,
Rolf-Peter Scholz,
K. Bowman,
M. Lorenzo,
Hong Li,
...
Jiansheng Wu,
Wenlin Yuan,
B. Peters,
Zhengyan Kan,
Jeremy Stinson,
M. Mak,
Z. Modrusan,
C. Eigenbrot,
R. Firestein,
H. Stern,
K. Rajalingam,
G. Schaefer,
M. Merchant,
M. Sliwkowski,
F. D. de Sauvage,
S. Seshagiri
|
8 |
2013 |
8
🐜
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|
🦁
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Spectrum of diverse genomic alterations define non–clear cell renal carcinoma subtypes
41 auth.
S. Durinck,
E. Stawiski,
Andrea Pavía-Jiménez,
Z. Modrusan,
Payal Kapur,
B. Jaiswal,
N. Zhang,
Vanina Toffessi-Tcheuyap,
Thong T. Nguyen,
Kanika Bajaj Pahuja,
Y. Chen,
S. Saleem,
Subhra Chaudhuri,
Sherry Heldens,
Marlena Jackson,
...
Samuel Peña-Llopis,
Joseph Guillory,
Karen Toy,
Connie Ha,
Corissa J. Harris,
E. Holloman,
Haley Hill,
Jeremy Stinson,
Celina Sanchez Rivers,
V. Janakiraman,
Weiru Wang,
L. Kinch,
N. Grishin,
Peter M. Haverty,
B. Chow,
J. Gehring,
Jens Reeder,
Grégoire Pau,
Thomas D. Wu,
V. Margulis,
Y. Lotan,
A. Sagalowsky,
I. Pedrosa,
F. D. de Sauvage,
J. Brugarolas,
S. Seshagiri
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8 |
2014 |
8
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