BetterScholar BetterScholar

S. Ciufo

Nucleic Acids Res., Database J. Biol. Databases Curation, Nature, International Journal of Systematic and Evolutionary Microbiology, Genome Research, Nucleic Acids Research, BMC Bioinformatics Show more
13
Role
Title
Level Year L/R
🐜 Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
55 auth. N. O'Leary, Mathew W. Wright, J. R. Brister, S. Ciufo, Diana Haddad, Richard McVeigh, B. Rajput, B. Robbertse, B. Smith-White, Danso Ako-Adjei, Alex Astashyn, Azat Badretdin, YΔ«mΓ­ng BΓ o, O. Blinkova, V. Brover, ... V. Chetvernin, Jinna Choi, Eric Cox, O. Ermolaeva, C. Farrell, Tamara Goldfarb, Tripti Gupta, D. Haft, Eneida L. Hatcher, W. Hlavina, V. Joardar, Vamsi K Kodali, Wenjun Li, D. Maglott, Patrick Masterson, Kelly M. McGarvey, Michael R. Murphy, K. O'Neill, S. Pujar, S. Rangwala, Daniel Rausch, Lillian D. Riddick, C. Schoch, Andrei Shkeda, Susan S. Storz, Hanzhen Sun, F. Thibaud-Nissen, I. Tolstoy, R. E. Tully, A. Vatsan, Craig Wallin, David Webb, Wendy Wu, M. Landrum, Avi Kimchi, T. Tatusova, Michael DiCuccio, P. Kitts, Terence D. Murphy, K. Pruitt 		12 2015
12
🐜
🐜 NCBI Taxonomy: a comprehensive update on curation, resources and tools
16 auth. C. Schoch, S. Ciufo, M. Domrachev, C. Hotton, S. Kannan, Rogneda Khovanskaya, Detlef D. Leipe, Richard McVeigh, K. O'Neill, B. Robbertse, ... Shobha Sharma, Vladimir Soussov, John P. Sullivan, Lu Sun, S. Turner, I. Karsch-Mizrachi 		10 2020
10
🐜
🐜 A hydrogen-based subsurface microbial community dominated by methanogens
7 auth. F. Chapelle, K. O'Neill, P. Bradley, B. MethΓ©, S. Ciufo, L. Knobel, ... D. Lovley 		8 2002
8
🐜
🐬 RefSeq microbial genomes database: new representation and annotation strategy
T. Tatusova, S. Ciufo, B. Fedorov, K. O'Neill, I. Tolstoy 		8 2013
8
🐬
🐬 Geobacter metallireducens accesses insoluble Fe(iii) oxide by chemotaxis
S. Childers, S. Ciufo, D. Lovley 		8 2002
8
🐬
🦁 Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI
10 auth. S. Ciufo, S. Kannan, Shobha Sharma, Azat Badretdin, Karen Clark, S. Turner, ... Slava Brover, C. Schoch, Avi Kimchi, Michael DiCuccio 		8 2018
8
🦁
🐜 The National Center for Biotechnology Information's Protein Clusters Database
13 auth. W. Klimke, R. Agarwala, Azat Badretdin, Slava Chetvernin, S. Ciufo, B. Fedorov, B. Kiryutin, K. O'Neill, W. Resch, S. Resenchuk, ... S. Schafer, I. Tolstoy, T. Tatusova 		8 2008
8
🐜
🐜 Update on RefSeq microbial genomes resources
8 auth. T. Tatusova, S. Ciufo, S. Federhen, B. Fedorov, Richard McVeigh, K. O'Neill, ... I. Tolstoy, L. Zaslavsky 		7 2014
7
🐜
🐜 Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?
12 auth. W. V. Ng, S. Ciufo, T. Smith, Roger E Bumgarner, D. Baskin, J. Faust, ... B. Hall, C. Loretz, J. Seto, J. Slagel, L. Hood, S. DasSarma 		6 1998
6
🐜
🐬 RefSeq microbial genomes database: new representation and annotation strategy
T. Tatusova, S. Ciufo, B. Fedorov, K. O'Neill, I. Tolstoy 		5 2015
5
🐬
🐜 The NCBI BioCollections Database
7 auth. Shobha Sharma, S. Ciufo, Elena Starchenko, Dakshesh Darji, Larry Chlumsky, I. Karsch-Mizrachi, ... C. Schoch 		5 2018
5
🐜
🐜 Improving taxonomic accuracy for fungi in public sequence databases: applying β€˜one name one species’ in well-defined genera with Trichoderma/Hypocrea as a test case
7 auth. B. Robbertse, Pooja K. Strope, P. Chaverri, R. Gazis, S. Ciufo, M. Domrachev, ... C. Schoch 		5 2017
5
🐜
🐬 Clustering analysis of proteins from microbial genomes at multiple levels of resolution
L. Zaslavsky, S. Ciufo, B. Fedorov, T. Tatusova 		4 2016
4
🐬