π
|
The B73 Maize Genome: Complexity, Diversity, and Dynamics
156 auth.
P. Schnable,
D. Ware,
R. Fulton,
J. Stein,
Fusheng Wei,
S. Pasternak,
Chengzhi Liang,
Jianwei Zhang,
L. Fulton,
Tina Graves,
P. Minx,
A. Reily,
L. Courtney,
Scott S. Kruchowski,
Chad Tomlinson,
...
C. Strong,
Kimberley D. Delehaunty,
C. Fronick,
B. Courtney,
S. Rock,
E. Belter,
Feiyu Du,
Kyung Kim,
R. Abbott,
M. Cotton,
Andy Levy,
P. Marchetto,
Kerri Ochoa,
S. M. Jackson,
B. Gillam,
Weizu Chen,
L. Yan,
Jamey Higginbotham,
M. Cardenas,
Jason E. Waligorski,
Elizabeth Applebaum,
L. Phelps,
J. Falcone,
K. Kanchi,
T. Thane,
A. Scimone,
Nay Thane,
J. Henke,
Tom Wang,
J. Ruppert,
Neha Shah,
Kelsi Rotter,
J. Hodges,
Elizabeth Ingenthron,
M. Cordes,
Sara Kohlberg,
Jennifer Sgro,
Brandon Delgado,
Kelly Mead,
A. Chinwalla,
S. Leonard,
Kevin Crouse,
K. Collura,
D. Kudrna,
J. Currie,
Ruifeng He,
A. Angelova,
Shanmugam Rajasekar,
T. Mueller,
Rene Lomeli,
Gabriel Scara,
A. Ko,
Krista Delaney,
Marina Wissotski,
G. LΓ³pez,
D. Campos,
Michele Braidotti,
Elizabeth Ashley,
W. Golser,
Hyeran Kim,
Seunghee Lee,
Jinke Lin,
Zeljko Dujmic,
Woojin Kim,
J. Talag,
A. Zuccolo,
Chuanzhu Fan,
Aswathy Sebastian,
M. Kramer,
L. Spiegel,
Lidia U. Nascimento,
Theresa Zutavern,
B. Miller,
Claude Ambroise,
S. Muller,
W. Spooner,
A. Narechania,
Liya Ren,
Sharon Wei,
B. Faga,
Michael J. Levy,
L. McMahan,
Peter Van Buren,
M. Vaughn,
Kai Ying,
C. Yeh,
S. Emrich,
Yi Jia,
A. Kalyanaraman,
An-Ping Hsia,
W. B. Barbazuk,
R. Baucom,
T. Brutnell,
N. Carpita,
C. Chaparro,
Jer-Ming Chia,
J. Deragon,
J. Estill,
Yan Fu,
J. Jeddeloh,
Yujun Han,
Hyeran Lee,
Pinghua Li,
D. Lisch,
Sanzhen Liu,
Zhijie Liu,
Dawn H. Nagel,
M. McCann,
P. SanMiguel,
A. Myers,
D. Nettleton,
John Nguyen,
Bryan W. Penning,
L. Ponnala,
Kevin L. Schneider,
D. Schwartz,
Anupma Sharma,
C. Soderlund,
Nathan M. Springer,
Qi Sun,
Hao Wang,
M. Waterman,
R. Westerman,
Thomas K. Wolfgruber,
Lixing Yang,
Yeisoo Yu,
Lifang Zhang,
Shiguo Zhou,
Qihui Zhu,
J. Bennetzen,
R. Dawe,
Jiming Jiang,
Ning Jiang,
G. Presting,
S. Wessler,
S. Aluru,
R. Martienssen,
S. Clifton,
W. McCombie,
R. Wing,
R. Wilson
|
11 |
2009 |
11 π
|
π
|
The tomato genome sequence provides insights into fleshy fruit evolution
322 auth.
Shusei Sato,
S. Tabata,
H. Hirakawa,
E. Asamizu,
K. Shirasawa,
S. Isobe,
T. Kaneko,
Yasukazu Nakamura,
D. Shibata,
K. Aoki,
M. Egholm,
James R. Knight,
R. Bogden,
Changbao Li,
Yang Shuang,
...
Xun Xu,
S. Pan,
Shifeng Cheng,
Xin Liu,
Yuanyuan Ren,
Jun Wang,
A. Albiero,
F. Pero,
S. Todesco,
J. Eck,
Robert M. Buels,
A. Bombarely,
J. Gosselin,
Minyun Huang,
J. Leto,
Naama Menda,
S. Strickler,
Linyong Mao,
Shan Gao,
I. Tecle,
T. York,
Yi Zheng,
J. Vrebalov,
Je Min Lee,
S. Zhong,
L. Mueller,
W. Stiekema,
Paolo Ribeca,
T. Alioto,
Wencai Yang,
Sanwen Huang,
Yong-chen Du,
Zhonghua Zhang,
Jianchang Gao,
Yan-mei Guo,
Xiaoxuan Wang,
Ying Li,
Jun He,
Chuanyou Li,
Zhukuan Cheng,
Jianru Zuo,
Jianfeng Ren,
Jiuhai Zhao,
Liuhua Yan,
Hongling Jiang,
Baoliang Wang,
Hongshuang Li,
Zhen-jun Li,
F. Fu,
Bingtang Chen,
B. Han,
Qi Feng,
Danlin Fan,
Ying Wang,
H. Ling,
Yongbiao Xue,
D. Ware,
W. McCombie,
Z. Lippman,
Jer-Ming Chia,
K. Jiang,
S. Pasternak,
Laura Gelley,
M. Kramer,
L. Anderson,
Song-Bin Chang,
S. Royer,
L. Shearer,
S. Stack,
J. Rose,
Yimin Xu,
N. T. Eannetta,
A. Matas,
R. McQuinn,
S. Tanksley,
F. Camara,
R. GuigΓ³,
S. Rombauts,
Jeffrey A. Fawcett,
Y. Peer,
D. Zamir,
Chunbo Liang,
M. Spannagl,
H. Gundlach,
R. Bruggmann,
K. Mayer,
Zhiqi Jia,
Junhong Zhang,
Z. Ye,
G. Bishop,
S. Butcher,
Rosa M Lopez-Cobollo,
Daniel W. A. Buchan,
Ioannis Filippis,
J. Abbott,
Rekha Dixit,
Manju Singh,
Archana Singh,
J. K. Pal,
A. Pandit,
Pradeep K. Singh,
A. Mahato,
V. Dogra,
K. Gaikwad,
T. Sharma,
T. Mohapatra,
N. Singh,
M. Causse,
C. Rothan,
T. Schiex,
CΓ©line Noirot,
A. Bellec,
C. Klopp,
C. Delalande,
H. Bergès,
J. Mariette,
P. Frasse,
S. Vautrin,
M. Zouine,
A. LatcheΜ,
C. Rousseau,
F. Regad,
J. Pech,
Murielle Philippot,
M. Bouzayen,
Pierre Pericard,
Sonia Osorio,
A. F. D. Carmen,
A. Monforte,
A. Granell,
R. FernΓ‘ndez-MuΓ±oz,
Mariana Conte,
G. Lichtenstein,
F. Carrari,
G. Bellis,
F. Fuligni,
C. Peano,
S. Grandillo,
Pasquale Termolino,
M. Pietrella,
Elio Fantini,
G. Falcone,
A. Fiore,
G. Giuliano,
L. Lopez,
Paolo Facella,
G. Perrotta,
Loretta Daddiego,
G. Bryan,
M. Orozco,
X. Pastor,
D. Torrents,
Keygene N. V. Marco G. M. van Schriek,
R. Feron,
Jan van Oeveren,
P. Heer,
Lorena daPonte,
Saskia Jacobs-Oomen,
M. Cariaso,
M. Prins,
M. V. Eijk,
A. Janssen,
M. Haaren,
Sung-Hwan Jo,
Jungeun Kim,
Suk-Yoon. Kwon,
Sangmi Kim,
D. Koo,
Sanghyeob Lee,
Cheol-Goo Hur,
Chris Clouser,
A. Rico,
A. Hallab,
C. Gebhardt,
K. Klee,
Anika Joecker,
J. Warfsmann,
U. Goebel,
S. Kawamura,
K. Yano,
J. Sherman,
H. Fukuoka,
Satomi Negoro,
Sarita Bhutty,
Parul Chowdhury,
D. Chattopadhyay,
E. Datema,
S. Smit,
E. Schijlen,
J. Belt,
J. V. Haarst,
S. Peters,
M. V. Staveren,
M. Henkens,
P. Mooyman,
T. Hesselink,
R. V. Ham,
Guoyong Jiang,
M. Droege,
D. Choi,
B. Kang,
Byung-Dong Kim,
Minkyu Park,
Seungill Kim,
Seon-In Yeom,
Yong-Hwan Lee,
Y. Choi,
Guangcun Li,
Jianwei Gao,
Yongsheng Liu,
Shengxiong Huang,
V. FernΓ‘ndez-Pedrosa,
Carmen Collado,
S. Zuniga,
Guoping Wang,
R. Cade,
R. Dietrich,
J. Rogers,
S. Knapp,
Z. Fei,
Ruth White,
T. Thannhauser,
J. Giovannoni,
M. Botella,
Louise Gilbert,
R. GonzaΜlez,
J. Goicoechea,
Yeisoo Yu,
D. Kudrna,
K. Collura,
Marina Wissotski,
R. Wing,
H. Schoof,
B. Meyers,
Aishwarya Bala Gurazada,
P. Green,
S. Mathur,
S. Vyas,
A. Solanke,
Rahul Kumar,
Vikrant Gupta,
A. Sharma,
P. Khurana,
J. Khurana,
A. Tyagi,
T. Dalmay,
I. Mohorianu,
Brandon Walts,
S. Chamala,
W. B. Barbazuk,
Jingping Li,
Hui Guo,
Tae-Ho Lee,
Yupeng Wang,
Dong Zhang,
A. Paterson,
Xiyin Wang,
Haibao Tang,
A. Barone,
M. Chiusano,
M. Ercolano,
N. DβAgostino,
M. D. Filippo,
Alessandra Traini,
W. Sanseverino,
L. Frusciante,
G. Seymour,
Mounir Elharam,
Ying Fu,
A. Hua,
S. Kenton,
J. Lewis,
S. Lin,
F. Najar,
H. Lai,
B. Qin,
Chunmei Qu,
Ruihua Shi,
Doug White,
James R. White,
Yanbo Xing,
Keqin Yang,
Jing Yi,
Ziyun Yao,
Liping Zhou,
B. Roe,
A. Vezzi,
M. Dangelo,
R. Zimbello,
Riccardo Schiavon,
E. Caniato,
Chiara Rigobello,
D. Campagna,
N. Vitulo,
G. Valle,
D. Nelson,
E. Paoli,
D. Szinay,
H. Jong,
Yuling Bai,
R. Visser,
R. K. Lankhorst,
H. Beasley,
K. McLaren,
C. Nicholson,
C. Riddle,
Giulio Gianese
|
11 |
2012 |
11 π
|
π
|
Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes
40 auth.
S. AparΓcio,
Jarrod Chapman,
E. Stupka,
N. Putnam,
Jer-Ming Chia,
Paramvir S. Dehal,
A. Christoffels,
Sam Rash,
Shawn Hoon,
A. Smit,
M. Gelpke,
J. Roach,
T. Oh,
Isaac Y. Ho,
Marie Wong,
...
C. Detter,
P. Predki,
Alice Tay,
S. Lucas,
P. Richardson,
Sarah F. Smith,
M. Clark,
Y. Edwards,
N. Doggett,
A. Zharkikh,
S. Tavtigian,
D. Pruss,
Mary Barnstead,
C. Evans,
H. Baden,
Justin Powell,
GwΓͺnlyn Glusman,
L. Rowen,
L. Hood,
Y. H. Tan,
G. Elgar,
T. Hawkins,
B. Venkatesh,
D. Rokhsar,
S. Brenner
|
10 |
2002 |
10 π
|
π
|
KBase: The United States Department of Energy Systems Biology Knowledgebase
80 auth.
A. Arkin,
R. Cottingham,
C. Henry,
N. Harris,
Rick L. Stevens,
S. Maslov,
Paramvir S. Dehal,
D. Ware,
Fernando PΓ©rez,
S. Canon,
Michael W. Sneddon,
Matthew L. Henderson,
William J. Riehl,
Daniel Murphy-Olson,
Stephen Y Chan,
...
R. Kamimura,
Meghan Drake,
T. Brettin,
E. Glass,
D. Chivian,
D. Gunter,
D. Weston,
Benjamin H. Allen,
J. Baumohl,
A. Best,
Ben Bowen,
S. Brenner,
Christopher Bun,
J. Chandonia,
Jer-Ming Chia,
R. Colasanti,
Neal Conrad,
James J. Davis,
B. Davison,
M. DeJongh,
Scott Devoid,
Emily M. Dietrich,
I. Dubchak,
Janaka N. Edirisinghe,
Gang Fang,
JosΓ© P. Faria,
Paul Frybarger,
Wolfgang Gerlach,
M. Gerstein,
A. Greiner,
James Gurtowski,
Holly L. Haun,
Fei He,
Rashmi Jain,
marcin p. joachimiak,
Kevin P. Keegan,
S. Kondo,
Vivek Kumar,
M. Land,
Folker Meyer,
M. Mills,
P. Novichkov,
Taeyun Oh,
G. Olsen,
R. Olson,
B. Parrello,
S. Pasternak,
Erik Pearson,
S. Poon,
Gavin A. Price,
Srividya Ramakrishnan,
P. Ranjan,
P. Ronald,
M. Schatz,
S. Seaver,
Maulik Shukla,
R. Sutormin,
M. Syed,
Jim Thomason,
N. Tintle,
Daifeng Wang,
Fangfang Xia,
H. Yoo,
Shinjae Yoo,
Dantong Yu
|
10 |
2018 |
10 π
|
π
|
Comparative population genomics of maize domestication and improvement
25 auth.
M. Hufford,
Xun Xu,
J. Heerwaarden,
T. PyhΓ€jΓ€rvi,
Jer-Ming Chia,
R. Cartwright,
Robert J. Elshire,
J. Glaubitz,
Katherine E. Guill,
S. Kaeppler,
Jinsheng Lai,
P. Morrell,
Laura M. Shannon,
Chi Song,
Nathan M. Springer,
...
Ruth A. Swanson-Wagner,
P. Tiffin,
Jun Wang,
Gengyun Zhang,
J. Doebley,
M. McMullen,
D. Ware,
E. Buckler,
Shuang Yang,
J. Ross-Ibarra
|
9 |
2012 |
9 π
|
π
|
A First-Generation Haplotype Map of Maize
12 auth.
M. Gore,
Jer-Ming Chia,
Robert J. Elshire,
Qi Sun,
E. Ersoz,
B. Hurwitz,
...
Jason Peiffer,
M. McMullen,
G. Grills,
J. Ross-Ibarra,
D. Ware,
E. Buckler
|
9 |
2009 |
9 π
|
π
|
Genetic structure and domestication history of the grape
12 auth.
S. Myles,
A. Boyko,
C. Owens,
P. Brown,
F. Grassi,
M. Aradhya,
...
B. Prins,
Andy Reynolds,
Jer-Ming Chia,
D. Ware,
C. Bustamante,
E. Buckler
|
9 |
2011 |
9 π
|
π¦
|
Maize HapMap2 identifies extant variation from a genome in flux
38 auth.
Jer-Ming Chia,
C. Song,
Peter J. Bradbury,
D. Costich,
N. Leon,
J. Doebley,
Robert J. Elshire,
B. Gaut,
Laura Geller,
J. Glaubitz,
M. Gore,
Katherine E. Guill,
J. Holland,
M. Hufford,
Jinsheng Lai,
...
M. Li,
Xin Liu,
Yanli Lu,
R. Mccombie,
R. Nelson,
J. Poland,
B. Prasanna,
T. PyhΓ€jΓ€rvi,
T. Rong,
R. Sekhon,
Qi Sun,
M. Tenaillon,
Feng Tian,
Jun Wang,
Xun Xu,
Zhiwu Zhang,
S. Kaeppler,
J. Ross-Ibarra,
M. McMullen,
E. Buckler,
Gengyun Zhang,
Yunbi Xu,
D. Ware
|
9 |
2012 |
9 π¦
|
π¬
|
Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes.
A. Christoffels,
Esther G. L. Koh,
Jer-Ming Chia,
S. Brenner,
S. AparΓcio,
B. Venkatesh
|
9 |
2004 |
9 π¬
|
π
|
A Genome-Wide Characterization of MicroRNA Genes in Maize
9 auth.
Lifang Zhang,
Jer-Ming Chia,
J. Stein,
Zhijie Liu,
A. Narechania,
C. Maher,
...
Katherine E. Guill,
M. McMullen,
D. Ware
|
8 |
2009 |
8 π
|
π
|
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica
19 auth.
M. Schatz,
L. Maron,
J. Stein,
A. Wences,
A. Wences,
James Gurtowski,
E. Biggers,
E. Biggers,
Hayan Lee,
Hayan Lee,
...
M. Kramer,
E. Antoniou,
E. Ghiban,
Mark H. Wright,
Jer-Ming Chia,
D. Ware,
D. Ware,
S. McCouch,
W. McCombie
|
7 |
2014 |
7 π
|
π
|
Rapid Genomic Characterization of the Genus Vitis
7 auth.
S. Myles,
Jer-Ming Chia,
B. Hurwitz,
Chuck Simon,
G. Zhong,
E. Buckler,
...
D. Ware
|
7 |
2010 |
7 π
|
π
|
Biopipe: a flexible framework for protocol-based bioinformatics analysis.
10 auth.
Shawn Hoon,
Kiran Ratnapu,
Jer-Ming Chia,
B. Kumarasamy,
Juguang Xiao,
M. Clamp,
...
Arne Stabenau,
Simon C. Potter,
Laura Clarke,
E. Stupka
|
6 |
2003 |
6 π
|