🐜
|
deepTools2: a next generation web server for deep-sequencing data analysis
9 auth.
Fidel Ramírez,
D. Ryan,
B. Grüning,
Vivek Bhardwaj,
Fabian Kilpert,
Andreas S. Richter,
...
Steffen Heyne,
F. Dündar,
T. Manke
|
12 |
2016 |
12 🐜
|
🐬
|
IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions
Anke Busch,
Andreas S. Richter,
Rolf Backofen
|
9 |
2008 |
9 🐬
|
🐜
|
The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery
230 auth.
H. Stunnenberg,
M. Hirst,
S. Abrignani,
David Adams,
Melanie Talata De Almeida,
L. Altucci,
Viren Amin,
I. Amit,
S. Antonarakis,
Samuel Aparicio,
T. Arima,
Laura Arrigoni,
R. Arts,
V. Asnafi,
M. Esteller,
...
J. Bae,
K. Bassler,
S. Beck,
B. Berkman,
B. Bernstein,
M. Bilenky,
A. Bird,
C. Bock,
Bernhard O. Boehm,
G. Bourque,
C. Breeze,
B. Brors,
David Bujold,
O. Burren,
M. Bussemakers,
A. Butterworth,
E. Campo,
Enrique Carrillo-de-Santa-Pau,
L. Chadwick,
K. Chan,
Wei Chen,
Tom H. Cheung,
Luca Chiapperino,
Nak Hyen Choi,
Ho-Ryun Chung,
Laura Clarke,
J. Connors,
P. Cronet,
J. Danesh,
M. Dermitzakis,
G. Drewes,
P. Durek,
S. Dyke,
Tomasz Dyląg,
C. Eaves,
Peter Ebert,
R. Eils,
J. Eils,
Catherine A. Ennis,
T. Enver,
E. Feingold,
B. Felder,
A. Ferguson-Smith,
J. Fitzgibbon,
Paul Flicek,
R. Foo,
P. Fraser,
M. Frontini,
Eileen Furlong,
Sitanshu Gakkhar,
Nina Gasparoni,
G. Gasparoni,
D. Geschwind,
Petar Glažar,
T. Graf,
F. Grosveld,
Xin Guan,
R. Guigó,
I. Gut,
A. Hamann,
B. Han,
R. Harris,
S. Heath,
Kristian Helin,
J. Hengstler,
A. Heravi‐Moussavi,
K. Herrup,
Steven C. Hill,
J. Hilton,
B. Hitz,
B. Horsthemke,
Ming Hu,
Joo-Yeon Hwang,
N. Ip,
Takashi Ito,
B. Javierre,
S. Jenko,
T. Jenuwein,
Y. Joly,
Steven J. M. Jones,
Y. Kanai,
Hee Gyung Kang,
A. Karsan,
A. Kiemer,
S. Kim,
Bong-Jo Kim,
Hyeon-Hoe Kim,
Hiroshi Kimura,
S. Kinkley,
F. Klironomos,
In-Uk Koh,
Myrto A. Kostadima,
C. Kressler,
Roman Kreuzhuber,
A. Kundaje,
R. Küppers,
C. Larabell,
P. Lasko,
M. Lathrop,
Daniel H.S. Lee,
Suman Lee,
H. Lehrach,
E. Leitão,
Thomas Lengauer,
Å. Lernmark,
R. D. Leslie,
G. Leung,
Danny Leung,
Markus Loeffler,
Yussanne Ma,
A. Mai,
T. Manke,
E. R. Marcotte,
M. Marra,
J. Martens,
J. Martín-Subero,
K. Maschke,
C. Merten,
A. Milosavljevic,
S. Minucci,
Totai Mitsuyama,
Richard A. Moore,
F. Müller,
A. Mungall,
M. Netea,
K. Nordström,
I. Norstedt,
Hiroaki Okae,
V. Onuchic,
Francis Ouellette,
W. Ouwehand,
M. Pagani,
V. Pancaldi,
T. Pap,
T. Pastinen,
Ronak Y Patel,
D. Paul,
M. Pazin,
P. Pelicci,
A. Phillips,
J. Polansky,
B. Porse,
J. Pospisilik,
Shyam Prabhakar,
Dena Procaccini,
Andreas Dr Radbruch,
N. Rajewsky,
Vardham Rakyan,
W. Reik,
B. Ren,
David Richardson,
Andreas S. Richter,
D. Rico,
David J. Roberts,
P. Rosenstiel,
M. Rothstein,
Abdulrahman Salhab,
Hiroyuki Sasaki,
John S. Satterlee,
S. Sauer,
C. Schacht,
Florian Schmidt,
G. Schmitz,
S. Schreiber,
Christopher Schröder,
D. Schübeler,
J. Schultze,
Ronald P. Schulyer,
Marcel H. Schulz,
M. Seifert,
K. Shirahige,
R. Siebert,
T. Sierocinski,
L. Siminoff,
A. Sinha,
N. Soranzo,
S. Spicuglia,
M. Spivakov,
C. Steidl,
J. Strattan,
Mitchell D Stratton,
P. Südbeck,
Hao Sun,
Narumi Suzuki,
Yutaka Suzuki,
A. Tanay,
D. Torrents,
F. Tyson,
T. Ulas,
S. Ullrich,
T. Ushijima,
A. Valencia,
E. Vellenga,
M. Vingron,
C. Wallace,
S. Wallner,
J. Walter,
Huating Wang,
S. Weber,
Nina Weiler,
Andreas Weller,
A. Weng,
Steven E. Wilder,
S. Wiseman,
A. Wu,
Zhenguo Wu,
Jieyi Xiong,
Yasuhiro Yamashita,
Xinyi Yang,
D. Yap,
K. Yip,
S. Yip,
Jae-il Yoo,
D. Zerbino,
Gideon Zipprich
|
8 |
2016 |
8 🐜
|
🐜
|
CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains
9 auth.
Patrick R. Wright,
J. Georg,
Martin Mann,
D. Sorescu,
Andreas S. Richter,
Steffen Lott,
...
Robert Kleinkauf,
W. Hess,
R. Backofen
|
8 |
2014 |
8 🐜
|
🐜
|
Comparative genomics boosts target prediction for bacterial small RNAs
8 auth.
Patrick R. Wright,
Andreas S. Richter,
Kai Papenfort,
Martin Mann,
J. Vogel,
W. Hess,
...
R. Backofen,
J. Georg
|
7 |
2013 |
7 🐜
|
🐬
|
Freiburg RNA Tools: a web server integrating IntaRNA, ExpaRNA and LocARNA
Cameron Smith,
Steffen Heyne,
Andreas S. Richter,
S. Will,
R. Backofen
|
7 |
2010 |
7 🐬
|
🐜
|
Epigenomic Profiling of Human CD4+ T Cells Supports a Linear Differentiation Model and Highlights Molecular Regulators of Memory Development.
58 auth.
P. Durek,
K. Nordström,
G. Gasparoni,
Abdulrahman Salhab,
C. Kressler,
Melanie de Almeida,
K. Bassler,
T. Ulas,
Florian Schmidt,
Jieyi Xiong,
Petar Glažar,
F. Klironomos,
A. Sinha,
S. Kinkley,
Xinyi Yang,
...
Laura Arrigoni,
A. Amirabad,
Fatemeh Behjati Ardakani,
L. Feuerbach,
O. Gorka,
Peter Ebert,
F. Müller,
Na Li,
S. Frischbutter,
S. Schlickeiser,
Carla Cendón,
Sebastian Fröhler,
B. Felder,
Nina Gasparoni,
Charles D. Imbusch,
B. Hutter,
Gideon Zipprich,
Yvonne Tauchmann,
S. Reinke,
G. Wassilew,
U. Hoffmann,
Andreas S. Richter,
L. Sieverling,
Hyun-Dong Chang,
U. Syrbe,
U. Kalus,
J. Eils,
B. Brors,
T. Manke,
J. Ruland,
Thomas Lengauer,
N. Rajewsky,
Wei Chen,
Jun Dong,
B. Sawitzki,
Ho-Ryun Chung,
P. Rosenstiel,
Marcel H. Schulz,
J. Schultze,
A. Radbruch,
J. Walter,
A. Hamann,
J. Polansky
|
7 |
2016 |
7 🐜
|
🐜
|
The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal
10 auth.
E. Sonnleitner,
N. González,
Theresa Sorger-Domenigg,
S. Heeb,
Andreas S. Richter,
R. Backofen,
...
P. Williams,
A. Hüttenhofer,
D. Haas,
U. Bläsi
|
7 |
2011 |
7 🐜
|
🐜
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snakePipes: facilitating flexible, scalable and integrative epigenomic analysis
9 auth.
Vivek Bhardwaj,
Steffen Heyne,
K. Sikora,
Leily Rabbani,
Michael Rauer,
Fabian Kilpert,
...
Andreas S. Richter,
D. Ryan,
T. Manke
|
7 |
2019 |
7 🐜
|
🐜
|
Freiburg RNA tools: a central online resource for RNA-focused research and teaching
22 auth.
Martin Raden,
S. M. Ali,
Omer S. Alkhnbashi,
A. Busch,
Fabrizio Costa,
J. A. Davis,
Florian Eggenhofer,
R. Gelhausen,
J. Georg,
Steffen Heyne,
...
M. Hiller,
Kousik Kundu,
Robert Kleinkauf,
Steffen Lott,
M. Mohamed,
A. Mattheis,
Milad Miladi,
Andreas S. Richter,
S. Will,
Joachim Wolff,
Patrick R. Wright,
R. Backofen
|
6 |
2018 |
6 🐜
|
🐜
|
Standardizing chromatin research: a simple and universal method for ChIP-seq
7 auth.
Laura Arrigoni,
Andreas S. Richter,
Emily Betancourt,
K. Bruder,
Sarah Diehl,
T. Manke,
...
U. Bönisch
|
6 |
2015 |
6 🐜
|
🦁
|
Seed-based IntaRNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1
Andreas S. Richter,
C. Schleberger,
R. Backofen,
C. Steglich
|
6 |
2009 |
6 🦁
|