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Topological Domains in Mammalian Genomes Identified by Analysis of Chromatin Interactions
9 auth.
Jesse R. Dixon,
Siddarth Selvaraj,
Feng Yue,
Audrey Kim,
Yan Li,
Yin Shen,
...
Ming Hu,
Jun S. Liu,
B. Ren
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12 |
2012 |
12
๐
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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression
216 auth.
N. Wray,
S. Ripke,
M. Mattheisen,
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Enda M. Byrne,
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E. Agerbo,
T. Air,
Till F. M. Andlauer,
S. Bacanu,
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A. Beekman,
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J. Bryois,
H. Buttenschรธn,
J. Bybjerg-Grauholm,
N. Cai,
E. Castelao,
J. Christensen,
ToniโKim Clarke,
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L. Colodro-Conde,
B. Couvy-Duchesne,
N. Craddock,
Gregory E. Crawford,
Cheynna A. Crowley,
Hassan S. Dashti,
G. Davies,
I. Deary,
F. Degenhardt,
E. Derks,
N. Direk,
Conor V. Dolan,
Erin C. Dunn,
T. Eley,
N. Eriksson,
V. Escott-Price,
Farnush Farhadi Hassan Kiadeh,
H. Finucane,
A. Forstner,
J. Frank,
Heฬleฬna A. Gaspar,
M. Gill,
P. Giusti-Rodrรญguez,
F. Goes,
Scott D. Gordon,
J. Grove,
L. Hall,
E. Hannon,
C. Hansen,
Thomas F. Hansen,
S. Herms,
Ian B. Hickie,
P. Hoffmann,
G. Homuth,
Carsten Horn,
J. Hottenga,
D. Hougaard,
Ming Hu,
Craig L Hyde,
M. Ising,
R. Jansen,
Fulai Jin,
E. Jorgenson,
J. A. Knowles,
Isaac S. Kohane,
J. Kraft,
Warren W. Kretzschmar,
J. Krogh,
Z. Kutalik,
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D. Macintyre,
D. MacKinnon,
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W. Maier,
J. Marchini,
H. Mbarek,
P. McGrath,
P. McGuffin,
S. Medland,
D. Mehta,
C. Middeldorp,
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Y. Milaneschi,
L. Milani,
J. Mill,
Francis M. Mondimore,
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S. Mostafavi,
N. Mullins,
M. Nauck,
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M. Nivard,
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Paul F. OโReilly,
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Roseann E. Peterson,
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D. Posthuma,
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R. Saxena,
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L. Shen,
Jianxin Shi,
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E. Sigurdsson,
Grant C. B. Sinnamon,
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Daniel J. Smith,
H. Stefรกnsson,
S. Steinberg,
C. Stockmeier,
F. Streit,
J. Strohmaier,
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A. Teumer,
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Bernhard T. Baune,
K. Berger,
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U. Dannlowski,
E. D. de Geus,
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D. Hinds,
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Nicholas G. Martin,
Andrew M. McIntosh,
A. Metspalu,
O. Mors,
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K. Stefรกnsson,
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H. Vรถlzke,
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A. Bรธrglum,
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11 |
2017 |
11
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|
A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome.
11 auth.
A. Schmitt,
Ming Hu,
Inkyung Jung,
Zheng Xu,
Yunjiang Qiu,
Catherine Tan,
...
Yun Li,
Shin Lin,
Yiing Lin,
C. Barr,
B. Ren
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9 |
2016 |
9
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|
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๐
|
Integrative functional genomic analysis of human brain development and neuropsychiatric risks
46 auth.
Mingfeng Li,
G. Santpere,
Y. Imamura Kawasawa,
O. Evgrafov,
Forrest O. Gulden,
Sirisha Pochareddy,
S. Sunkin,
Zhen Li,
Yurae Shin,
Ying Zhu,
A. Sousa,
Donna M. Werling,
R. Kitchen,
H. Kang,
M. Pletikos,
...
Jinmyung Choi,
S. Muchnik,
Xuming Xu,
Daifeng Wang,
B. Lorente-Galdos,
Shuang Liu,
P. Giusti-Rodrรญguez,
H. Won,
C. D. de Leeuw,
A. Pardiรฑas,
Ming Hu,
Fulai Jin,
Yun Li,
M. Owen,
M. OโDonovan,
J. Walters,
D. Posthuma,
M. Reimers,
P. Levitt,
D. Weinberger,
T. Hyde,
J. Kleinman,
D. Geschwind,
M. Hawrylycz,
M. State,
Stephan J Sanders,
P. Sullivan,
M. Gerstein,
E. Lein,
J. Knowles,
N. ล estan
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9 |
2018 |
9
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|
The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions
13 auth.
Yanli Wang,
F. Song,
Bo Zhang,
Lijun Zhang,
Jie Xu,
Dai-Yong Kuang,
Daofeng Li,
Mayank N. K. Choudhary,
Yun Li,
Ming Hu,
...
R. Hardison,
Ting Wang,
Feng Yue
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8 |
2017 |
8
๐
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|
The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery
230 auth.
H. Stunnenberg,
M. Hirst,
S. Abrignani,
David Adams,
Melanie Talata De Almeida,
L. Altucci,
Viren Amin,
I. Amit,
S. Antonarakis,
Samuel Aparicio,
T. Arima,
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R. Arts,
V. Asnafi,
M. Esteller,
...
J. Bae,
K. Bassler,
S. Beck,
B. Berkman,
B. Bernstein,
M. Bilenky,
A. Bird,
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David Bujold,
O. Burren,
M. Bussemakers,
A. Butterworth,
E. Campo,
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J. Connors,
P. Cronet,
J. Danesh,
M. Dermitzakis,
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P. Durek,
S. Dyke,
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g,
C. Eaves,
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B. Felder,
A. Ferguson-Smith,
J. Fitzgibbon,
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Nina Gasparoni,
G. Gasparoni,
D. Geschwind,
Petar Glaลพar,
T. Graf,
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Xin Guan,
R. Guigรณ,
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J. Hengstler,
A. HeraviโMoussavi,
K. Herrup,
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B. Hitz,
B. Horsthemke,
Ming Hu,
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N. Ip,
Takashi Ito,
B. Javierre,
S. Jenko,
T. Jenuwein,
Y. Joly,
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Hiroshi Kimura,
S. Kinkley,
F. Klironomos,
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A. Kundaje,
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M. Lathrop,
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ร
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J. Martรญn-Subero,
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S. Minucci,
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F. Mรผller,
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K. Nordstrรถm,
I. Norstedt,
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V. Onuchic,
Francis Ouellette,
W. Ouwehand,
M. Pagani,
V. Pancaldi,
T. Pap,
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D. Paul,
M. Pazin,
P. Pelicci,
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J. Polansky,
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David Richardson,
Andreas S. Richter,
D. Rico,
David J. Roberts,
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M. Rothstein,
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John S. Satterlee,
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C. Schacht,
Florian Schmidt,
G. Schmitz,
S. Schreiber,
Christopher Schrรถder,
D. Schรผbeler,
J. Schultze,
Ronald P. Schulyer,
Marcel H. Schulz,
M. Seifert,
K. Shirahige,
R. Siebert,
T. Sierocinski,
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A. Sinha,
N. Soranzo,
S. Spicuglia,
M. Spivakov,
C. Steidl,
J. Strattan,
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P. Suฬdbeck,
Hao Sun,
Narumi Suzuki,
Yutaka Suzuki,
A. Tanay,
D. Torrents,
F. Tyson,
T. Ulas,
S. Ullrich,
T. Ushijima,
A. Valencia,
E. Vellenga,
M. Vingron,
C. Wallace,
S. Wallner,
J. Walter,
Huating Wang,
S. Weber,
Nina Weiler,
Andreas Weller,
A. Weng,
Steven E. Wilder,
S. Wiseman,
A. Wu,
Zhenguo Wu,
Jieyi Xiong,
Yasuhiro Yamashita,
Xinyi Yang,
D. Yap,
K. Yip,
S. Yip,
Jae-il Yoo,
D. Zerbino,
Gideon Zipprich
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8 |
2016 |
8
๐
|
|
๐
|
Circular ecDNA promotes accessible chromatin and high oncogene expression
33 auth.
Sihan Wu,
Kristen M. Turner,
Nam Nguyen,
R. Raviram,
M. Erb,
J. Santini,
J. Luebeck,
Utkrisht Rajkumar,
Yarui Diao,
Yarui Diao,
Bin Li,
Wenjing Zhang,
Nathan M. Jameson,
M. Corces,
Jeffrey M. Granja,
...
Xingqi Chen,
Xingqi Chen,
C. Coruh,
Armen Abnousi,
Jack Houston,
Z. Ye,
Rong Hu,
Miao Yu,
Hoon Kim,
Julie A. Law,
R. Verhaak,
Ming Hu,
F. Furnari,
Howard Y. Chang,
Howard Y. Chang,
B. Ren,
V. Bafna,
P. Mischel
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8 |
2019 |
8
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๐ฌ
|
Genome-wide mapping and analysis of chromosome architecture
A. Schmitt,
Ming Hu,
B. Ren
|
8 |
2016 |
8
๐ฌ
|
|
๐
|
An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome
12 auth.
Chenxu Zhu,
Miao Yu,
Hui Huang,
Hui Huang,
Ivan Juric,
Armen Abnousi,
...
Rong Hu,
J. Lucero,
M. Behrens,
Ming Hu,
Bing-Jie Ren,
B. Ren
|
7 |
2019 |
7
๐
|
|
๐
|
Enhancing Hi-C data resolution with deep convolutional neural network HiCPlus
8 auth.
Yan Zhang,
Lin An,
Jie Xu,
Bo Zhang,
W. J. Zheng,
Ming Hu,
...
Jijun Tang,
Feng Yue
|
7 |
2018 |
7
๐
|
|
๐
|
Promoter-proximal CTCF-binding promotes long-range-enhancer dependent gene activation
16 auth.
Naoki Kubo,
H. Ishii,
Xiong Xiong,
Simona Bianco,
Franz Meitinger,
Rong Hu,
James D. Hocker,
Mattia Conte,
David U. Gorkin,
Miao Yu,
...
Bin Li,
Jesse R. Dixon,
Ming Hu,
M. Nicodemi,
Huimin Zhao,
B. Ren
|
7 |
2021 |
7
๐
|
|
๐
|
CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains
18 auth.
Hui Huang,
Quan-sheng Zhu,
Adam P. Jussila,
Yuanyuan Han,
B. Bintu,
C. Kern,
Mattia Conte,
Yanxiao Zhang,
Simona Bianco,
A. Chiariello,
...
Miao Yu,
Rong Hu,
Melodi Tastemel,
Ivan Juric,
Ming Hu,
M. Nicodemi,
X. Zhuang,
B. Ren
|
6 |
2021 |
6
๐
|
|
๐
|
Robust Hi-C Maps of Enhancer-Promoter Interactions Reveal the Function of Non-coding Genome in Neural Development and Diseases.
22 auth.
Leina Lu,
Xiaoxiao Liu,
Wei-Kai Huang,
P. Giusti-Rodrรญguez,
Jian Cui,
Shanshan Zhang,
Wanying Xu,
Z. Wen,
Shufeng Ma,
Jonathan D. Rosen,
...
Zheng Xu,
C. Bartels,
R. Kawaguchi,
Ming Hu,
P. Scacheri,
Zhili Rong,
Yun Li,
P. Sullivan,
Hongjun Song,
G. Ming,
Yan Li,
Fulai Jin
|
6 |
2020 |
6
๐
|
