|
π
|
Next-generation characterization of the Cancer Cell Line Encyclopedia
68 auth.
M. Ghandi,
F. Huang,
Judit JanΓ©-Valbuena,
G. Kryukov,
Christopher C. Lo,
E. McDonald,
J. Barretina,
Ellen T. Gelfand,
C. Bielski,
Haoxin Li,
K. Hu,
Alexander Y. Andreev-Drakhlin,
Jaegil Kim,
J. Hess,
B. Haas,
...
F. Aguet,
B. Weir,
M. Rothberg,
B. Paolella,
M. Lawrence,
Rehan Akbani,
Yiling Lu,
Hong L. Tiv,
P. Gokhale,
Antoine de Weck,
Ali Amin Mansour,
Coyin Oh,
J. Shih,
Kevin Hadi,
Yanay Rosen,
J. Bistline,
K. Venkatesan,
Anupama Reddy,
D. Sonkin,
Manway Liu,
J. LehΓ‘r,
Joshua M. Korn,
D. Porter,
Michael D. Jones,
J. Golji,
G. Caponigro,
Jordan E. Taylor,
C. Dunning,
Amanda L. Creech,
Allison C. Warren,
James M. McFarland,
Mahdi Zamanighomi,
A. Kauffmann,
Nicolas Stransky,
M. ImieliΕski,
Y. Maruvka,
A. Cherniack,
Aviad Tsherniak,
F. Vazquez,
Jacob D. Jaffe,
A. Lane,
D. Weinstock,
Cory M. Johannessen,
Michael P. Morrissey,
F. Stegmeier,
R. Schlegel,
W. Hahn,
G. Getz,
G. Mills,
J. Boehm,
T. Golub,
L. Garraway,
W. Sellers
|
11 |
2019 |
11
π
|
|
π
|
Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate
19 auth.
A. Chakraborty,
Tuomas Laukka,
M. Myllykoski,
A. Ringel,
M. Booker,
M. Tolstorukov,
Yuzhong Jeff Meng,
S. Meier,
R. Jennings,
Amanda L. Creech,
...
Zachary T. Herbert,
S. McBrayer,
B. Olenchock,
Jacob D. Jaffe,
M. Haigis,
R. Beroukhim,
S. Signoretti,
P. Koivunen,
W. Kaelin
|
8 |
2019 |
8
π
|
|
π
|
Defining HLA-II Ligand Processing and Binding Rules with Mass Spectrometry Enhances Cancer Epitope Prediction.
26 auth.
Jennifer G. Abelin,
D. Harjanto,
M. Malloy,
Prerna Suri,
Tyler Colson,
S. P. Goulding,
Amanda L. Creech,
L. Serrano,
Gibran Nasir,
Yusuf Nasrullah,
Christopher D. McGann,
Diana Velez,
Ying S. Ting,
A. Poran,
Daniel A. Rothenberg,
...
S. Chhangawala,
A. Rubinsteyn,
Jeff Hammerbacher,
R. Gaynor,
E. Fritsch,
J. Greshock,
Rob C. Oslund,
D. Barthelme,
T. Addona,
Christina M. Arieta,
Michael S. Rooney
|
7 |
2019 |
7
π
|
|
π
|
High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program
42 auth.
David P. LabbΓ©,
David P. LabbΓ©,
G. Zadra,
G. Zadra,
Meng Yang,
Jaime M. Reyes,
Charles Y. Lin,
Stefano Cacciatore,
E. Ebot,
Amanda L. Creech,
F. Giunchi,
M. Fiorentino,
H. Elfandy,
Sudeepa Syamala,
Edward D. Karoly,
...
M. Alshalalfa,
N. Erho,
A. Ross,
E. Schaeffer,
E. Gibb,
M. Takhar,
R. Den,
Jonathan M. Lehrer,
R. Karnes,
S. Freedland,
S. Freedland,
E. Davicioni,
D. Spratt,
L. Ellis,
L. Ellis,
L. Ellis,
Jacob D. Jaffe,
Anthony DΚΌAmico,
P. Kantoff,
P. Kantoff,
J. Bradner,
L. Mucci,
L. Mucci,
J. Chavarro,
J. Chavarro,
M. Loda,
Myles A. Brown
|
7 |
2019 |
7
π
|
|
π
|
Reduced-representation Phosphosignatures Measured by Quantitative Targeted MS Capture Cellular States and Enable Large-scale Comparison of Drug-induced Phenotypes*
20 auth.
Jennifer G. Abelin,
Jinal Patel,
Xiaodong Lu,
Caitlin M. Feeney,
Lα»la Fagbami,
Amanda L. Creech,
R. Hu,
Daniel Lam,
Desiree Davison,
Lindsay K. Pino,
...
Jana W. Qiao,
E. Kuhn,
Adam Officer,
Jianxue Li,
Susan E. Abbatiello,
A. Subramanian,
R. Sidman,
Evan L. Snyder,
S. Carr,
Jacob D. Jaffe
|
6 |
2016 |
6
π
|
|
π
|
A Library of Phosphoproteomic and Chromatin Signatures for Characterizing Cellular Responses to Drug Perturbations
34 auth.
Lev Litichevskiy,
Ryan Peckner,
Jennifer G. Abelin,
Jacob K. Asiedu,
Amanda L. Creech,
John F. Davis,
Desiree Davison,
C. Dunning,
Jarrett D. Egertson,
S. Egri,
Joshua Gould,
Tak Ko,
S. Johnson,
D. L. Lahr,
Daniel Lam,
...
Zihan Liu,
Nicholas J. Lyons,
Xiaodong Lu,
B. MacLean,
A. Mungenast,
Adam Officer,
Ted E. Natoli,
Malvina Papanastasiou,
Jinal Patel,
Vagisha Sharma,
Courtney Toder,
Andrew A. Tubelli,
Jennie Z. Young,
S. Carr,
T. Golub,
A. Subramanian,
M. MacCoss,
L. Tsai,
Jacob D. Jaffe
|
6 |
2017 |
6
π
|
|
π¦
|
The Role of Mass Spectrometry and Proteogenomics in the Advancement of HLA Epitope Prediction
8 auth.
Amanda L. Creech,
Ying S. Ting,
S. P. Goulding,
John F. K. Sauld,
D. Barthelme,
Michael S. Rooney,
...
T. Addona,
Jennifer G. Abelin
|
5 |
2018 |
5
π¦
|
|
π¦
|
Building the Connectivity Map of epigenetics: chromatin profiling by quantitative targeted mass spectrometry.
11 auth.
Amanda L. Creech,
Jordan E. Taylor,
V. Maier,
Xiaoyun Wu,
Caitlin M. Feeney,
N. Udeshi,
...
S. Peach,
J. Boehm,
Jeannie T. Lee,
S. Carr,
Jacob D. Jaffe
|
5 |
2015 |
5
π¦
|
|
π
|
Functional Proteomic Analysis of Repressive Histone Methyltransferase Complexes Reveals ZNF518B as a G9A Regulator*
14 auth.
V. Maier,
Caitlin M. Feeney,
Jordan E. Taylor,
Amanda L. Creech,
Jana W. Qiao,
A. SzaΜntoΜ,
P. Das,
Nicholas Chevrier,
Catherine Cifuentes-Rojas,
S. Orkin,
...
S. Carr,
Jacob D. Jaffe,
Philipp Mertins,
Jeannie T. Lee
|
5 |
2015 |
5
π
|
|
π
|
Neuronal differentiation and cell-cycle programs mediate response to BET-bromodomain inhibition in MYC-driven medulloblastoma
56 auth.
P. Bandopadhayay,
F. Piccioni,
Ryan OβRourke,
Patricia Ho,
Elizabeth M. Gonzalez,
G. Buchan,
Kenin Qian,
G. Gionet,
Emily J. Girard,
Margo Coxon,
M. Rees,
Lisa Brenan,
F. Dubois,
Ofer Shapira,
N. Greenwald,
...
M. Pages,
Amanda Balboni Iniguez,
B. Paolella,
A. Meng,
Claire Sinai,
G. Roti,
N. Dharia,
Amanda L. Creech,
Benjamin Tanenbaum,
Prasidda Khadka,
A. Tracy,
Hong L. Tiv,
A. Hong,
S. Coy,
R. Rashid,
Jia-Ren Lin,
G. Cowley,
F. Lam,
A. Goodale,
Yenarae Lee,
Kathleen Schoolcraft,
F. Vazquez,
W. Hahn,
Aviad Tsherniak,
J. Bradner,
M. Yaffe,
T. Milde,
S. Pfister,
J. Qi,
M. Schenone,
S. Carr,
K. Ligon,
M. Kieran,
S. Santagata,
J. Olson,
P. Gokhale,
Jacob D. Jaffe,
D. Root,
K. Stegmaier,
Cory M. Johannessen,
R. Beroukhim
|
5 |
2019 |
5
π
|
|
π
|
HIF activation causes synthetic lethality between the VHL tumor suppressor and the EZH1 histone methyltransferase
18 auth.
A. Chakraborty,
E. Nakamura,
J. Qi,
Amanda L. Creech,
Jacob D. Jaffe,
Joshiawa Paulk,
Jesse S. Novak,
Kshithija Nagulapalli,
S. McBrayer,
G. Cowley,
...
J. Pineda,
Jiaxi Song,
Yaoyu E. Wang,
S. Carr,
D. Root,
S. Signoretti,
J. Bradner,
W. Kaelin
|
5 |
2017 |
5
π
|
