|
π’
|
Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls
7 auth.
J. Zook,
B. Chapman,
Jason Wang,
D. Mittelman,
Oliver M. Hofmann,
Winston A Hide,
...
M. Salit
|
9 |
2013 |
9
π’
|
|
π’
|
Extensive sequencing of seven human genomes to characterize benchmark reference materials
53 auth.
J. Zook,
David Catoe,
Jennifer McDaniel,
Lindsay K. Vang,
Noah Spies,
A. Sidow,
Z. Weng,
Yuling Liu,
C. Mason,
Noah Alexander,
Elizabeth HΓ©naff,
Alexa B. R. McIntyre,
D. Chandramohan,
F. Chen,
Erich Jaeger,
...
A. Moshrefi,
K. Pham,
William Stedman,
T. Liang,
M. Saghbini,
Ε½. DΕΎakula,
A. Hastie,
H. Cao,
G. Deikus,
E. Schadt,
R. Sebra,
A. Bashir,
R. Truty,
Christopher C. Chang,
N. Gulbahce,
Keyan Zhao,
Srinka Ghosh,
F. Hyland,
Yutao Fu,
Mark J. P. Chaisson,
Chunlin Xiao,
Jonathan Trow,
S. Sherry,
A. Zaranek,
Madeleine P. Ball,
Jason R. Bobe,
Preston W. Estep,
G. Church,
Patrick J. Marks,
S. Kyriazopoulou-Panagiotopoulou,
Grace X. Y. Zheng,
Michael Schnall-Levin,
H. Ordonez,
Patrice A. Mudivarti,
Kristina M. Giorda,
Ying Sheng,
K. Rypdal,
M. Salit
|
9 |
2015 |
9
π’
|
|
π
|
The External RNA Controls Consortium: a progress report
53 auth.
S. Baker,
S. Bauer,
R. Beyer,
J. Brenton,
B. Bromley,
John C. Burrill,
H. Causton,
Michael P Conley,
Rosalie Elespuru,
M. Fero,
C. Foy,
J. Fuscoe,
Xiaolian Gao,
D. Gerhold,
Patrick Gilles,
...
F. Goodsaid,
Xu Guo,
J. Hackett,
R. Hockett,
P. Ikonomi,
R. Irizarry,
E. Kawasaki,
Tamma Kaysser-Kranich,
Kathleen F. Kerr,
Gretchen Kiser,
Walter H Koch,
Kathy Y Lee,
Chunmei Liu,
Z Lewis Liu,
A. Lucas,
C. Manohar,
G. Miyada,
Z. Modrusan,
H. Parkes,
R. Puri,
L. Reid,
T. Ryder,
M. Salit,
R. R. Samaha,
U. Scherf,
T. Sendera,
R. Setterquist,
Leming Shi,
R. Shippy,
J. Soriano,
E. Wagar,
J. Warrington,
Mickey P. Williams,
Frederike Wilmer,
Michael Wilson,
P. Wolber,
Xiaoning Wu,
R. Zadro
|
8 |
2005 |
8
π
|
|
π’
|
Testing at scale during the COVID-19 pandemic
T. Mercer,
M. Salit
|
8 |
2021 |
8
π’
|
|
π
|
Best practices for benchmarking germline small-variant calls in human genomes
17 auth.
P. Krusche,
Len Trigg,
P. Boutros,
C. Mason,
Francisco M. De La Vega,
Benjamin L. Moore,
Mar GonzΓ lez-Porta,
M. Eberle,
Z. Tezak,
Samir Lababidi,
...
R. Truty,
G. Asimenos,
B. Funke,
M. Fleharty,
B. Chapman,
M. Salit,
J. Zook
|
8 |
2019 |
8
π
|
|
π’
|
A robust benchmark for detection of germline large deletions and insertions
50 auth.
J. Zook,
Nancy F. Hansen,
Nathan D. Olson,
Lesley M. Chapman,
J. Mullikin,
Chunlin Xiao,
S. Sherry,
S. Koren,
A. Phillippy,
P. Boutros,
S. M. Sahraeian,
Vincent Huang,
A. Rouette,
Noah Alexander,
C. Mason,
...
I. Hajirasouliha,
Camir Ricketts,
Joyce Lee,
R. Tearle,
Ian T. Fiddes,
Γ. M. Barrio,
J. Wala,
Andrew Carroll,
Noushin Ghaffari,
O. Rodriguez,
A. Bashir,
S. Jackman,
J. Farrell,
A. Wenger,
C. Alkan,
Arda Soylev,
M. Schatz,
S. Garg,
George M. Church,
T. Marschall,
Ken Chen,
Xian Fan,
A. English,
J. Rosenfeld,
Weichen Zhou,
Ryan E. Mills,
Jay M. Sage,
Jennifer R. Davis,
Michael D. Kaiser,
J. Oliver,
Anthony P. Catalano,
Mark J. P. Chaisson,
Noah Spies,
F. Sedlazeck,
M. Salit
|
8 |
2020 |
8
π’
|
|
π
|
The determination of stem cell fate by 3D scaffold structures through the control of cell shape.
11 auth.
Girish Kumar,
Girish Kumar,
Christopher K. Tison,
K. Chatterjee,
K. Chatterjee,
K. Chatterjee,
...
P. Pine,
Jennifer McDaniel,
M. Salit,
M. Young,
C. Simon
|
8 |
2011 |
8
π
|
|
π’
|
An open resource for accurately benchmarking small variant and reference calls
14 auth.
J. Zook,
Jennifer McDaniel,
Nathan D. Olson,
Justin Wagner,
H. Parikh,
Haynes Heaton,
S. Irvine,
Len Trigg,
R. Truty,
Cory Y. McLean,
...
Francisco M. De La Vega,
Chunlin Xiao,
S. Sherry,
M. Salit
|
8 |
2019 |
8
π’
|
|
π
|
Best practices for evaluating single nucleotide variant calling methods for microbial genomics
10 auth.
Nathan D. Olson,
Steven P. Lund,
R. Colman,
J. Foster,
J. Sahl,
J. Schupp,
...
P. Keim,
J. Morrow,
M. Salit,
J. Zook
|
7 |
2015 |
7
π
|
|
π’
|
Measurements of translation initiation from all 64 codons in E. coli
8 auth.
Ariel Hecht,
J. Glasgow,
P. Jaschke,
L. Bawazer,
M. S. Munson,
J. Cochran,
...
D. Endy,
M. Salit
|
7 |
2016 |
7
π’
|
|
π¬
|
LAMP Diagnostics at the Point-of-Care: Emerging Trends and Perspectives for the Developer Community
Taylor J Moehling,
G. Choi,
L. Dugan,
M. Salit,
R. Meagher
|
7 |
2021 |
7
π¬
|
