|
π
|
Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin
13 auth.
Sai Ma,
Bing Zhang,
Lindsay M. LaFave,
Zachary D. Chiang,
Yan Hu,
Jiarui Ding,
Alison Brack,
Vinay K. Kartha,
Travis Law,
C. Lareau,
...
Y. Hsu,
A. Regev,
Jason D. Buenrostro
|
9 |
2020 |
9
π
|
|
π
|
Lineage Tracing in Humans Enabled by Mitochondrial Mutations and Single-Cell Genomics
20 auth.
Leif S. Ludwig,
C. Lareau,
J. Ulirsch,
Elena Christian,
C. Muus,
Lauren H. Li,
K. Pelka,
William Ge,
Yaara Oren,
Alison Brack,
...
Travis Law,
Christopher Rodman,
Jonathan H. Chen,
G. Boland,
N. Hacohen,
O. Rozenblatt-Rosen,
Martin J. Aryee,
Jason D. Buenrostro,
A. Regev,
V. Sankaran
|
8 |
2019 |
8
π
|
|
π
|
Induction and transcriptional regulation of the co-inhibitory gene module in T cells
21 auth.
N. Chihara,
A. Madi,
T. Kondo,
Huiyuan Zhang,
Nandini Acharya,
Meromit Singer,
J. Nyman,
N. Marjanovic,
Monika S. Kowalczyk,
Chao Wang,
...
S. KurtuluΕ,
Travis Law,
Yasaman Etminan,
James T. Nevin,
C. Buckley,
Patrick R. Burkett,
Jason D. Buenrostro,
O. Rozenblatt-Rosen,
A. Anderson,
A. Regev,
V. Kuchroo
|
8 |
2018 |
8
π
|
|
π
|
A large peptidome dataset improves HLA class I epitope prediction across most of the human population
25 auth.
Siranush Sarkizova,
Susan Klaeger,
Phuong M. Le,
Letitia W. Li,
G. Oliveira,
Hasmik Keshishian,
Christina R. Hartigan,
Wandi Zhang,
D. Braun,
K. Ligon,
P. Bachireddy,
I. Zervantonakis,
Jennifer M. Rosenbluth,
Tamara Ouspenskaia,
Travis Law,
...
S. Justesen,
Jonathan D. Stevens,
W. Lane,
T. Eisenhaure,
Guang Lan Zhang,
K. Clauser,
N. Hacohen,
S. Carr,
Catherine J. Wu,
D. Keskin
|
8 |
2019 |
8
π
|
|
π
|
CAR T cell killing requires the IFNΞ³R pathway in solid but not liquid tumours
20 auth.
R. Larson,
M. Kann,
Stefanie R. Bailey,
N. Haradhvala,
P. Llopis,
Amanda A Bouffard,
Irene ScarfΓ²,
Mark B. Leick,
K. Grauwet,
Trisha R. Berger,
...
Kai Stewart,
P. Anekal,
Max Jan,
J. Joung,
A. Schmidts,
Tamara Ouspenskaia,
Travis Law,
A. Regev,
G. Getz,
M. Maus
|
7 |
2022 |
7
π
|
|
π
|
Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer
28 auth.
Tamara Ouspenskaia,
Travis Law,
K. Clauser,
Susan Klaeger,
Siranush Sarkizova,
F. Aguet,
Elena Christian,
Binyamin A. Knisbacher,
Phuong M. Le,
Christina R. Hartigan,
Hasmik Keshishian,
Annie Apffel,
G. Oliveira,
Wandi Zhang,
Sarah Chen,
...
Y. Chow,
Zhe Ji,
Irwin Jungreis,
S. Shukla,
S. Justesen,
P. Bachireddy,
M. Kellis,
G. Getz,
N. Hacohen,
D. Keskin,
Steve Carr,
Catherine J. Wu,
A. Regev
|
7 |
2021 |
7
π
|
|
π
|
Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma.
18 auth.
Lindsay M. LaFave,
Vinay K. Kartha,
Sai Ma,
Kevin Meli,
Isabella Del Priore,
C. Lareau,
S. Naranjo,
Peter M. K. Westcott,
Fabiana M. Duarte,
Venkat Sankar,
...
Zachary D. Chiang,
Alison Brack,
Travis Law,
Haley Hauck,
Annalisa Okimoto,
A. Regev,
Jason D. Buenrostro,
T. Jacks
|
7 |
2020 |
7
π
|
|
π
|
Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer
27 auth.
Tamara Ouspenskaia,
Travis Law,
K. Clauser,
Susan Klaeger,
Siranush Sarkizova,
F. Aguet,
Bo Li,
Elena Christian,
Binyamin A. Knisbacher,
Phuong M. Le,
Christina R. Hartigan,
Hasmik Keshishian,
Annie Apffel,
G. Oliveira,
Wandi Zhang,
...
Y. Chow,
Zhe Ji,
Irwin Jungreis,
S. Shukla,
P. Bachireddy,
Manolis Kellis,
G. Getz,
N. Hacohen,
D. Keskin,
S. Carr,
Catherine J. Wu,
A. Regev
|
5 |
2020 |
5
π
|
|
π
|
Cellular states are coupled to genomic and viral heterogeneity in HPV-related oropharyngeal carcinoma
27 auth.
Sidharth V. Puram,
M. Mints,
A. Pal,
Zongtai Qi,
Ashley N. Reeb,
Kyla Z. Gelev,
Thomas F. Barrett,
Sophie P Gerndt,
Ping Liu,
Anuraag S. Parikh,
Salma Ramadan,
Travis Law,
E. Mroz,
J. Rocco,
D. Adkins,
...
W. Thorstad,
H. Gay,
L. Ding,
R. Paniello,
P. Pipkorn,
R. Jackson,
Xiaowei Wang,
A. Mazul,
R. Chernock,
J. Zevallos,
Jessica M. Silva-Fisher,
I. Tirosh
|
5 |
2023 |
5
π
|
|
π
|
Single-Cell Deconvolution of Head and Neck Squamous Cell Carcinoma
15 auth.
Zongtai Qi,
Yating Liu,
M. Mints,
Riley Mullins,
Reilly A. Sample,
Travis Law,
Thomas F. Barrett,
A. Mazul,
R. Jackson,
Stephen Y. Kang,
...
P. Pipkorn,
Anuraag S. Parikh,
I. Tirosh,
Joseph Dougherty,
Sidharth V. Puram
|
4 |
2021 |
4
π
|
|
π
|
Abstract 566: Neoantigens from translated unannotated open reading frames in cancer
18 auth.
Tamara Ouspenskaia,
Travis Law,
K. Clauser,
Susan Klaeger,
D. Keskin,
Bo Li,
Elena Christian,
Y. Chow,
Phuong M. Le,
Joshua Gould,
...
Zhe Ji,
Wandi Zhang,
P. Bachireddy,
Siranush Sarkizova,
N. Hacohen,
S. Carr,
Catherine J. Wu,
A. Regev
|
0 |
2019 |
0
π
|
