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B. Usadel

Plant, Cell and Environment, Plant Physiology, Bioinform., Proceedings of the National Academy of Sciences of the United States of America, Nucleic Acids Res., The Plant Cell Online, Nature Genetics, BMC Bioinformatics Show more
15
Role
Title
Level Year L/R
🐢 Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger, M. Lohse, B. Usadel 		15 2014
15
🐢
🐜 [email protected]: the Golm Metabolome Database
13 auth. J. Kopka, N. Schauer, S. Krueger, C. Birkemeyer, B. Usadel, Eveline Bergmüller, P. Dörmann, W. Weckwerth, Y. Gibon, M. Stitt, ... L. Willmitzer, A. Fernie, D. Steinhauser 		10 2005
10
🐜
🐢 RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
7 auth. M. Lohse, Anthony M. Bolger, Axel Nagel, A. Fernie, J. Lunn, M. Stitt, ... B. Usadel 		9 2012
9
🐢
🐜 Sugars and Circadian Regulation Make Major Contributions to the Global Regulation of Diurnal Gene Expression in Arabidopsis[W][OA]
10 auth. O. Bläsing, Y. Gibon, Manuela Günther, Melanie Höhne, R. Morcuende, D. Osuna, ... O. Thimm, B. Usadel, W. Scheible, M. Stitt 		9 2005
9
🐜
🦁 Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses1
16 auth. B. Usadel, Axel Nagel, O. Thimm, Henning Redestig, O. Blaesing, N. Palacios-Rojas, J. Selbig, Jan Hannemann, M. Piques, D. Steinhauser, ... W. Scheible, Y. Gibon, R. Morcuende, Daniel Weicht, S. Meyer, M. Stitt 		9 2005
9
🦁
🐜 Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus.
11 auth. R. Morcuende, R. Bari, Y. Gibon, Wenming Zheng, B. Pant, O. Bläsing, ... B. Usadel, Tomasz Czechowski, M. Udvardi, M. Stitt, W. Scheible 		9 2007
9
🐜
🦁 A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize.
B. Usadel, F. Poree, Axel Nagel, M. Lohse, Angelika Czedik-Eysenberg, M. Stitt 		9 2009
9
🦁
🐜 Starch as a major integrator in the regulation of plant growth
19 auth. Ronan Sulpice, Eva-Theresa Pyl, Hirofumi Ishihara, S. Trenkamp, M. Steinfath, Hanna Witucka-Wall, Y. Gibon, B. Usadel, F. Poree, M. Piques, ... M. von Korff, Marie-Caroline Steinhauser, J. Keurentjes, Manuela Guenther, Melanie Hoehne, J. Selbig, A. Fernie, T. Altmann, M. Stitt 		9 2009
9
🐜
🐢 Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data.
10 auth. M. Lohse, Axel Nagel, T. Herter, P. May, M. Schroda, R. Zrenner, ... Takayuki Tohge, A. Fernie, M. Stitt, B. Usadel 		9 2014
9
🐢
🐜 Integrated Analysis of Metabolite and Transcript Levels Reveals the Metabolic Shifts That Underlie Tomato Fruit Development and Highlight Regulatory Aspects of Metabolic Network Behavior1[W]
12 auth. F. Carrari, C. Baxter, B. Usadel, Ewa Urbańczyk-Wochniak, M. Zanor, A. Nunes‐Nesi, ... V. Nikiforova, Danilo Centero, Antje Ratzka, M. Pauly, L. Sweetlove, A. Fernie 		8 2006
8
🐜
🦁 Co-expression tools for plant biology: opportunities for hypothesis generation and caveats.
10 auth. B. Usadel, T. Obayashi, M. Mutwil, F. Giorgi, G. Bassel, M. Tanimoto, ... Amanda Chow, D. Steinhauser, S. Persson, N. Provart 		8 2009
8
🦁
🐜 The genome of the stress-tolerant wild tomato species Solanum pennellii
43 auth. Anthony M. Bolger, F. Scossa, Marie E. Bolger, C. Lanz, Florian Maumus, Takayuki Tohge, H. Quesneville, S. Alseekh, Iben Sørensen, G. Lichtenstein, Eric A Fich, Mariana Conte, Heike Keller, Korbinian Schneeberger, R. Schwacke, ... Itai Ofner, J. Vrebalov, Yimin Xu, Sonia Osorio, S. Aflitos, E. Schijlen, J. Jiménez-Gómez, Małgorzata Ryngajłło, S. Kimura, Ravi Kumar, Daniel Koenig, Lauren R Headland, J. Maloof, N. Sinha, R. V. Van Ham, R. K. Lankhorst, Linyong Mao, Alexander Vogel, Borjana Arsova, R. Panstruga, Z. Fei, J. Rose, D. Zamir, F. Carrari, J. Giovannoni, D. Weigel, B. Usadel, A. Fernie 		8 2014
8
🐜
🦁 PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
12 auth. B. Usadel, Axel Nagel, D. Steinhauser, Y. Gibon, O. Bläsing, Henning Redestig, ... N. Sreenivasulu, L. Krall, M. Hannah, F. Poree, A. Fernie, M. Stitt 		8 2006
8
🦁
🦁 Global Transcript Levels Respond to Small Changes of the Carbon Status during Progressive Exhaustion of Carbohydrates in Arabidopsis Rosettes1[W][OA]
7 auth. B. Usadel, O. Bläsing, Y. Gibon, K. Retzlaff, Melanie Höhne, Manuela Günther, ... M. Stitt 		8 2008
8
🦁
🐜 Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato
25 auth. Daniel Koenig, J. Jiménez-Gómez, S. Kimura, Daniel Fulop, D. Chitwood, Lauren R Headland, Ravi Kumar, Michael F. Covington, Upendra Kumar Devisetty, An V. Tat, Takayuki Tohge, Anthony M. Bolger, Korbinian Schneeberger, S. Ossowski, C. Lanz, ... Guangyan Xiong, Mallorie Taylor-Teeples, S. Brady, M. Pauly, D. Weigel, B. Usadel, A. Fernie, Jie Peng, N. Sinha, J. Maloof 		8 2013
8
🐜