|
🐜
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Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study
25 auth.
T. Walker,
T. Kohl,
S. Omar,
J. Hedge,
Carlos del Ojo Elias,
Phelim Bradley,
Z. Iqbal,
S. Feuerriegel,
K. Niehaus,
Daniel J. Wilson,
David A. Clifton,
G. Kapatai,
R. Bowden,
F. Drobniewski,
C. Allix-Béguec,
...
C. Gaudin,
J. Parkhill,
R. Diel,
P. Supply,
D. W. Crook,
Grace Smith,
Sarah Walker,
N. Ismail,
S. Niemann,
T. Peto
|
9 |
2015 |
9
🐜
|
|
🐜
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Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data
11 auth.
Yang Yang,
K. Niehaus,
T. Walker,
Z. Iqbal,
Sarah Walker,
Daniel J. Wilson,
...
T. Peto,
D. Crook,
Grace Smith,
Tingting Zhu,
D. Clifton
|
6 |
2017 |
6
🐜
|
|
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Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes
126 auth.
M. Hunt,
B. Letcher,
K. Malone,
G. Nguyen,
M. B. Hall,
R. M. Colquhoun,
L. Lima,
M. C. Schatz,
S. Ramakrishnan,
I. Barilar,
Simone Battaglia,
E. Borroni,
Angela Pires Brandão,
A. Brankin,
A. Cabibbe,
...
Joshua Carter,
D. Cirillo,
P. Claxton,
David A. Clifton,
Ted Cohen,
Jorge Coronel,
D. Crook,
V. Dreyer,
S. Earle,
Vin-cent Escuyer,
L. Ferrazoli,
Philip W. Fowler,
G. F. Gao,
Jennifer Gardy,
Saheer Gharbia,
K. T. Ghisi,
Arash Ghodousi,
Ana Lu´ıza,
Gibertoni Cruz,
Louis Grandjean,
Clara Grazian,
R. Groenheit,
Jennifer L. Guthrie,
Wen-cong He,
Harald Hoffmann,
S. Hoosdally,
Z. Iqbal,
Nazir Ismail,
Lisa Jarrett,
L. Joseph,
Ruwen Jou,
Priti Kambli,
Rukhsar Khot,
Jeff Knaggs,
Anastasia Koch,
Donna J Kohlerschmidt,
S. Kouchaki,
Alexander S. Lachapelle,
Ajit Lalvani,
S. Lapierre,
I. F. Laurenson,
Wan-Hsuan Lin,
Chunfa Liu,
Dong-xin Liu,
Ayan Mandal,
Mikael Mansj¨o,
D. Matias,
Graeme Meintjes,
Fl´avia de,
Freitas Mendes,
M. Merker,
M. Mihalić,
J. Millard,
P. Miotto,
Nerges Mistry,
David Moore,
Kim-berlee A Musser,
D. Ngcamu,
Hoang Ngoc,
Nhung,
Stefan Niemann,
K. Nilgiriwala,
Camus Nimmo,
N. Okozi,
Rosangela Siqueira Oliveira,
S. Omar,
N. Paton,
Timothy E. A. Peto,
Juliana Maira,
Watanabe Pinhata,
S. Plesnik,
Z. M. Puyén,
M. Rabodoarivelo,
N. Rakotosamimanana,
P. Rancoita,
Priti Rathod,
Esther Robinson,
G. Rodger,
Camilla Rodrigues,
T. Rodwell,
A. Roohi,
D. Santos-Lazaro,
Sanchi Shah,
Thomas Kohl,
Grace Smith,
W. Solano,
A. Spitaleri,
P. Supply,
Utkarsha Surve,
S. Tahseen,
N. Thuong,
Thuong,
Guy Thwaites,
Katharina Todt,
A. Trovato,
C. Utpatel,
Annelies Van Rie,
Srinivasan Vijay,
Timothy M Walker,
Sarah Walker,
Robin Warren,
J. Werngren,
Maria Wijkander,
Robert J. Wilkinson,
Daniel J Wilson,
Penelope Wintringer,
Yuanyuan Xiao,
Yang Yang,
Yanlin Zhao,
Shen-Yuan Yao,
Baoli Zhu
|
4 |
2021 |
4
🐜
|
|
🐜
|
Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene approach
118 auth.
I. Barilar,
Simone Battaglia,
E. Borroni,
Angela Pires Brandão,
A. Brankin,
A. Cabibbe,
Joshua Carter,
Darren Chetty,
D. Cirillo,
P. Claxton,
David A. Clifton,
Ted Cohen,
J. Coronel,
D. W. Crook,
V. Dreyer,
...
S. Earle,
V. Escuyer,
L. Ferrazoli,
Philip W. Fowler,
G. F. Gao,
Jennifer Gardy,
Saheer Gharbia,
K. T. Ghisi,
Arash Ghodousi,
A. G. Gibertoni Cruz,
Louis Grandjean,
Clara Grazian,
R. Groenheit,
Jennifer L. Guthrie,
Wen-cong He,
Harald Hoffmann,
S. Hoosdally,
M. Hunt,
Z. Iqbal,
N. Ismail,
Lisa Jarrett,
L. Joseph,
R. Jou,
Priti Kambli,
Rukhsar Khot,
Jeff Knaggs,
Anastasia Koch,
Donna J Kohlerschmidt,
S. Kouchaki,
Alexander S. Lachapelle,
A. Lalvani,
S. Lapierre,
I. F. Laurenson,
B. Letcher,
Wan-Hsuan Lin,
Chunfa Liu,
Dong-xin Liu,
Kerri M. Malone,
Ayan Mandal,
M. Mansjö,
Daniela Vicente Lucena Calisto Matias,
Graeme Meintjes,
Flávia de Freitas Mendes,
M. Merker,
M. Mihalić,
J. Millard,
P. Miotto,
Nerges Mistry,
David A. J. Moore,
K. Musser,
D. Ngcamu,
H. N. Nhung,
S. Niemann,
K. Nilgiriwala,
Camus Nimmo,
Max O’Donnell,
N. Okozi,
R. Oliveira,
S. Omar,
N. Paton,
Timothy E. A. Peto,
J. Pinhata,
S. Plesnik,
Z. M. Puyén,
M. Rabodoarivelo,
N. Rakotosamimanana,
P. Rancoita,
Priti Rathod,
Esther Robinson,
G. Rodger,
Camilla Rodrigues,
T. Rodwell,
A. Roohi,
D. Santos-Lazaro,
Sanchi Shah,
Grace Smith,
T. Kohl,
W. Solano,
A. Spitaleri,
A. Steyn,
P. Supply,
Utkarsha Surve,
S. Tahseen,
N. Thuong,
Guy Thwaites,
Katharina Todt,
A. Trovato,
C. Utpatel,
Annelies Van Rie,
Srinivasan Vijay,
A. S. Walker,
T. Walker,
Robin Warren,
J. Werngren,
Maria Wijkander,
Robert J. Wilkinson,
Daniel J Wilson,
Penelope Wintringer,
Yuanyuan Xiao,
Yang Yang,
Yanlin Zhao,
Shen-Yuan Yao,
Baoli Zhu
|
4 |
2024 |
4
🐜
|
|
🐜
|
A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the Mycobacterium tuberculosis complex by whole genome sequencing
16 auth.
S. Lipworth,
R. Jajou,
A. D. Neeling,
Phelim Bradley,
Wim van der Hoek,
G. Maphalala,
Maryline Bonnet,
Elizabeth Sanchez-Padilla,
Roland Diel,
Stefan Niemann,
...
Z. Iqbal,
Grace Smith,
T. Peto,
D. Crook,
Timothy M Walker,
D. Soolingen
|
1 |
2017 |
1
🐜
|
|
🐜
|
Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis (vol 164, pg 1522, 2018)
17 auth.
Philip W. Fowler,
Cruz Alg.,
S. Hoosdally,
Lisa Jarrett,
E. Borroni,
Matteo Chiacchiaretta,
Priti Rathod,
S. Lehmann,
N. Molodtsov,
Clara Grazian,
...
T. Walker,
Esther Robinson,
Harald Hoffmann,
Peto Tea.,
D. Cirillo,
Grace Smith,
D. W. Crook
|
0 |
2019 |
0
🐜
|
|
🐜
|
Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe [version 1; peer review: awaiting peer review]
27 auth.
M. Hunt,
Phelim Bradley,
S. Lapierre,
S. Heys,
Mark Thomsit,
M. B. Hall,
Kerri M. Malone,
Penelope Wintringer,
Timothy M. Walker,
Daniela M. Cirillo,
Iñaki Comas,
M. R. Farhat,
Phillip Fowler,
Jennifer Gardy,
Nazir Ismail,
...
T. Kohl,
V. Mathys,
M. Merker,
Stefan Niemann,
S. Omar,
V. Sintchenko,
Grace Smith,
D. Soolingen,
T. Peto,
D. W. Crook,
Z. Iqbal,
SG Lapierre
|
0 |
2019 |
0
🐜
|
