BetterScholar BetterScholar
10
Role
Title
Level Year L/R
🐜 Key Parameters of Tumor Epitope Immunogenicity Revealed Through a Consortium Approach Improve Neoantigen Prediction
145 auth. Daniel K. Wells, Marit M. van Buuren, Kristen K. Dang, Vanessa M Hubbard-Lucey, K. Sheehan, Katie M. Campbell, Andrew Lamb, J. Ward, J. Sidney, A. Blázquez, A. Rech, J. Zaretsky, Begonya Comin-Anduix, Alphonsus H. C. Ng, W. Chour, ... Thomas Yu, H. Rizvi, J. Chen, Patrice A Manning, Gabriela Steiner, Xengie Doan, T. Merghoub, J. Guinney, A. Kolom, Cheryl Selinsky, A. Ribas, M. Hellmann, N. Hacohen, A. Sette, J. Heath, N. Bhardwaj, F. Ramsdell, R. Schreiber, T. Schumacher, P. Kvistborg, N. Defranoux, Aly A. Khan, A. Lugade, A. Lazic, Angela Frentzen, A. Tadmor, A. Sasson, A. Rao, Baikang Pei, Barbara Schrörs, B. Berent-Maoz, B. Carreno, Bin Song, Bjoern Peters, B. Li, B. Higgs, Brian J. Stevenson, C. Iseli, Christopher A. Miller, C. Morehouse, C. Melief, Cristina Puig-Saus, Daphne van Beek, D. Balli, D. Gfeller, D. Haussler, D. Jäger, E. Cortes, Ekaterina Esaulova, E. Sherafat, Francisco Arcila, G. Bartha, Geng Liu, G. Coukos, Guilhem Richard, Han Chang, Han Si, I. Zörnig, I. Xenarios, I. Măndoiu, Irsan E. Kooi, James P. Conway, J. Kessler, J. Greenbaum, Jason F. Perera, J. Harris, J. Hundal, Jennifer M. Shelton, Jianmin Wang, Jiaqian Wang, J. Greshock, Jonathon Blake, J. Szustakowski, Julia Kodysh, J. Forman, Lei Wei, Leo J. Lee, Lorenzo F. Fanchi, M. Slagter, Maren Lang, Markus Mueller, Martin Lower, M. Vormehr, M. Artyomov, M. Kuziora, M. Princiotta, M. Bassani-Sternberg, Mignonette H Macabali, Milica R. Kojicic, Naibo Yang, N. Raicevic, N. Guex, N. Robine, N. Halama, Nikola Skundric, Ognjen Milićević, Pascal Gellert, P. Jongeneel, P. Charoentong, P. Srivastava, Prateek Tanden, Priyanka Shah, Q. Hu, Ravi Gupta, Richard O. Chen, R. Petit, R. Ziman, R. Hilker, S. Shukla, Sahar Al Seesi, S. Boyle, S. Qiu, Siranush Sarkizova, S. Salama, Song Liu, Song Wu, S. Sridhar, S. Ketelaars, S. Jhunjhunwala, T. Shcheglova, Thierry Schuepbach, T. Creasy, Veliborka Josipovic, Vladimir B. Kovacevic, W. Fu, Willem-Jan Krebber, Yi-Hsiang Hsu, Y. Sebastian, Zeynep Kosaloglu- Yalcin, Zhiqin Huang
8 2020
8
🐜
🐜 Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms
73 auth. T. Schaffter, D. Buist, Christoph I. Lee, Yaroslav Nikulin, D. Ribli, Y. Guan, William Lotter, Zequn Jie, Hao Du, Sijia Wang, Jiashi Feng, Mengling Feng, Hyo-Eun Kim, F. Albiol, A. Albiol, ... Stephen Morrell, Z. Wojna, M. Ahsen, U. Asif, Antonio Jose Jimeno Yepes, Shivanthan A. C. Yohanandan, S. Rabinovici-Cohen, Darvin Yi, B. Hoff, Thomas Yu, E. Chaibub Neto, D. Rubin, Peter Lindholm, L. Margolies, R. McBride, J. Rothstein, W. Sieh, Rami Ben-Ari, S. Harrer, A. Trister, S. Friend, Thea C. Norman, B. Sahiner, Fredrik Strand, J. Guinney, G. Stolovitzky, Lester W. Mackey, Joyce Cahoon, Li Shen, J. Sohn, H. Trivedi, Yiqiu Shen, L. Buturovic, José Costa Pereira, Jaime S. Cardoso, Eduardo Castro, K. T. Kalleberg, Obioma Pelka, Imane Nedjar, Krzysztof J. Geras, F. Nensa, Ethan Goan, S. Koitka, Luis Caballero, David D. Cox, Pavitra Krishnaswamy, G. Pandey, C. Friedrich, Dimitri Perrin, C. Fookes, Bibo Shi, Gerard Cardoso Negrie, M. Kawczynski, Kyunghyun Cho, Can Son Khoo, Joseph Y. Lo, A. Sorensen, Hwejin Jung
8 2020
8
🐜
🐜 Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
26 auth. M. Menden, Dennis Wang, M. Mason, B. Szalai, K. Bulusu, Y. Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, R. Wolfinger, Tin Nguyen, M. Zaslavskiy, I. S. Jang, Z. Ghazoui, M. Ahsen, ... Robert M. Vogel, E. C. Neto, Thea C. Norman, E. Tang, M. Garnett, G. Y. Veroli, S. Fawell, G. Stolovitzky, J. Guinney, J. Dry, J. Saez-Rodriguez
7 2019
7
🐜
🐜 Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data.
27 auth. J. Guinney, Tao Wang, T. Laajala, Kimberly R. Kanigel Winner, J. Christopher Bare, E. C. Neto, Suleiman A. Khan, Gopal Peddinti, A. Airola, T. Pahikkala, T. Mirtti, Thomas Yu, B. Bot, L. Shen, K. Abdallah, ... Thea C. Norman, S. Friend, G. Stolovitzky, H. Soule, C. Sweeney, C. Ryan, H. Scher, O. Sartor, Yang Xie, T. Aittokallio, F. Zhou, J. Costello
7 2017
7
🐜
🐜 Crowdsourcing assessment of maternal blood multi-omics for predicting gestational age and preterm birth
18 auth. A. Tarca, B. Pataki, R. Romero, M. Sirota, Y. Guan, Rintu Kutum, N. Gomez‐Lopez, Bogdan Done, Gaurav Bhatti, Thomas Yu, ... G. Andreoletti, T. Chaiworapongsa, S. Hassan, Chaur-Dong Hsu, N. Aghaeepour, G. Stolovitzky, I. Csabai, J. Costello
5 2020
5
🐜
🐜 AACR Project GENIE: 100,000 Cases and Beyond
19 auth. Trevor J Pugh, Jonathan L. Bell, J. Bruce, Gary J Doherty, M. Galvin, Michelle F. Green, Haley Hunter-Zinck, P. Kumari, M. LeNoue-Newton, Marilyn M. Li, ... James Lindsay, T. Mazor, A. Ovalle, S. Sammut, N. Schultz, Thomas Yu, S. Sweeney, Brady Bernard, Aacr Project Genie Consortium
5 2022
5
🐜
🐜 Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease
42 auth. M. Mason, C. Schinke, Christine L. P. Eng, F. Towfic, Fred Gruber, A. Dervan, B. S. White, Aditya Pratapa, Y. Guan, Hongjie Chen, Yi Cui, Bailiang Li, Thomas Yu, E. C. Neto, K. Mavrommatis, ... M. Ortiz, V. Lyzogubov, K. Bisht, H. Dai, F. Schmitz, E. Flynt, Daniel K. Rozelle, Samuel A. Danziger, A. Ratushny, Sandeep Kumar Dhanda, W. Dalton, H. Goldschmidt, H. Avet-Loiseau, M. Samur, B. Hayete, P. Sonneveld, K. Shain, N. Munshi, D. Auclair, D. Hose, G. Morgan, M. Trotter, D. Bassett, Jonathan Goke, B. Walker, A. Thakurta, J. Guinney
5 2019
5
🐜
🐜 Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
37 auth. W. Gong, Alejandro A. Granados, Jingyuan Hu, Matthew G. Jones, Ofir Raz, Irepan Salvador-Martínez, Hanrui Zhang, Ke-Huan K. Chow, Il-Youp Kwak, R. Retkute, Alidivinas Prusokas, Augustinas Prusokas, Alex Khodaverdian, Richard Zhang, Suhas Rao, ... Robert Wang, Phil Rennert, V. Saipradeep, N. Sivadasan, Aditya Rao, Thomas Joseph, Rajgopal Srinivasan, Jiajie Peng, Lu Han, Xuequn Shang, D. Garry, Thomas Yu, Verena Chung, M. Mason, Zhandong Liu, Y. Guan, N. Yosef, J. Shendure, M. Telford, E. Shapiro, M. Elowitz, Pablo Meyer
5 2021
5
🐜
🐜 Community assessment of cancer drug combination screens identifies strategies for synergy prediction
27 auth. Michael P. Menden, Dennis Wang, Y. Guan, M. Mason, B. Szalai, K. Bulusu, Thomas Yu, Jaewoo Kang, Minji Jeon, R. Wolfinger, Tin Nguyen, M. Zaslavskiy, AstraZeneca-Sanger Drug Combination Dream Consorti, I. S. Jang, Z. Ghazoui, ... M. Ahsen, Robert M. Vogel, E. C. Neto, Thea C. Norman, E. Tang, M. Garnett, G. Y. Veroli, S. Fawell, G. Stolovitzky, J. Guinney, J. Dry, J. Saez-Rodriguez
4 2017
4
🐜
🐜 DreamAI: algorithm for the imputation of proteomics data
21 auth. Weiping Ma, Sunkyu Kim, Shrabanti Chowdhury, Zhi Li, Mi Yang, S. Yoo, F. Petralia, Jeremy R. Jacobsen, J. Li, Xinzhou Ge, ... Ke-Xin Li, Thomas Yu, N. Edwards, S. Payne, P. Boutros, H. Rodriguez, G. Stolovitzky, Jun Zhu, D. Fenyo, J. Sáez-Rodríguez, Pei Wang
4 2020
4
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