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H. Nielsen

Nature Biotechnology, Bioinform., Protein Science, Nature Methods, Methods in molecular biology, Life Science Alliance, Intelligent Systems in Molecular Biology, The Protein Journal, International Conference on Algorithms for Computational Biology Show more
14
Role
Title
Level Year L/R
🐢 SignalP 4.0: discriminating signal peptides from transmembrane regions
T. Petersen, S. Brunak, G. Heijne, H. Nielsen 		13 2011
13
🐢
🐢 SignalP 5.0 improves signal peptide predictions using deep neural networks
8 auth. J. J. Almagro Armenteros, Konstantinos D. Tsirigos, C. Sønderby, T. Petersen, O. Winther, S. Brunak, ... G. Heijne, H. Nielsen 		11 2019
11
🐢
🐢 Assessing the accuracy of prediction algorithms for classification: an overview
P. Baldi, S. Brunak, Yves Chauvin, C. A. Andersen, H. Nielsen 		11 2000
11
🐢
🐬 ChloroP, a neural network‐based method for predicting chloroplast transit peptides and their cleavage sites
O. Emanuelsson, H. Nielsen, G. Heijne 		10 1999
10
🐬
🐢 SignalP 6.0 predicts all five types of signal peptides using protein language models
10 auth. Felix Teufel, J. J. Almagro Armenteros, alexander rosenberg johansen, M. H. Gíslason, Silas Irby Pihl, Konstantinos D. Tsirigos, ... O. Winther, S. Brunak, G. Heijne, H. Nielsen 		10 2022
10
🐢
🐬 Prediction of lipoprotein signal peptides in Gram‐negative bacteria
A. S. Juncker, H. Willenbrock, G. von Heijne, S. Brunak, H. Nielsen, A. Krogh 		10 2003
10
🐬
🦁 Predicting Secretory Proteins with SignalP.
H. Nielsen 		9 2017
9
🦁
🐢 Detecting sequence signals in targeting peptides using deep learning
7 auth. J. J. Almagro Armenteros, M. Salvatore, O. Emanuelsson, O. Winther, G. von Heijne, A. Elofsson, ... H. Nielsen 		9 2019
9
🐢
🐜 NetSurfP-2.0: improved prediction of protein structural features by integrated deep learning
11 auth. M. Klausen, M. C. Jespersen, H. Nielsen, Kamilla Kjærgaard Jensen, V. Jurtz, C. Sønderby, ... M. Sommer, O. Winther, Morten Nielsen, Bent Petersen, P. Marcatili 		8 2018
8
🐜
🐜 Improved metagenome binning and assembly using deep variational autoencoders
11 auth. J. Nissen, Joachim Johansen, R. Allesøe, C. Sønderby, J. J. A. Armenteros, C. Grønbech, ... L. Jensen, H. Nielsen, T. Petersen, O. Winther, Simon Rasmussen 		8 2021
8
🐜
🐢 Neural Network Prediction of Translation Initiation Sites in Eukaryotes: Perspectives for EST and Genome Analysis
A. Pedersen, H. Nielsen 		8 1997
8
🐢
🦁 A Brief History of Protein Sorting Prediction
H. Nielsen, Konstantinos D. Tsirigos, S. Brunak, G. von Heijne 		7 2019
7
🦁
🐬 Convolutional LSTM Networks for Subcellular Localization of Proteins
Søren Kaae Sønderby, C. Sønderby, H. Nielsen, O. Winther 		7 2015
7
🐬
🐜 An introduction to deep learning on biological sequence data: examples and solutions
8 auth. V. Jurtz, alexander rosenberg johansen, Morten Nielsen, J. J. A. Armenteros, H. Nielsen, C. Sønderby, ... O. Winther, Søren Kaae Sønderby 		7 2017
7
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