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The Earth BioGenome Project 2020: Starting the clock
85 auth.
H. Lewin,
S. Richards,
Erez Lieberman Aiden,
M. Allende,
J. Archibald,
Miklós Bálint,
Katharine Barker,
Bridget L. Baumgartner,
K. Belov,
G. Bertorelle,
M. Blaxter,
Jing Cai,
Nicolette Caperello,
K. Carlson,
Juan Carlos Castilla-Rubio,
...
S. Chaw,
Lei Chen,
Anna K. Childers,
J. Coddington,
Dalia A. Conde,
Montserrat Corominas,
K. Crandall,
A. Crawford,
F. diPalma,
R. Durbin,
Thankgod Ebenezer,
S. Edwards,
O. Fedrigo,
P. Flicek,
G. Formenti,
R. Gibbs,
M. Gilbert,
M. Goldstein,
J. M. Graves,
H. Greely,
I. Grigoriev,
K. Hackett,
N. Hall,
D. Haussler,
K. Helgen,
C. Hogg,
S. Isobe,
K. Jakobsen,
A. Janke,
E. Jarvis,
W. Johnson,
S. J. Jones,
E. Karlsson,
P. Kersey,
Jin-Hyoung Kim,
W. Kress,
Shigehiro Kuraku,
M. Lawniczak,
J. Leebens-Mack,
Xueyan Li,
K. Lindblad-Toh,
Xin Liu,
J. Lopez,
Tomàs Marquès-Bonet,
Sophie Mazard,
J. Mazet,
C. Mazzoni,
E. Myers,
R. O’Neill,
S. Paez,
Hyun Park,
G. Robinson,
Cristina Roquet,
Oliver A. Ryder,
J. Sabir,
H. B. Shaffer,
T. Shank,
Jacob S. Sherkow,
P. Soltis,
Boping Tang,
L. Tedersoo,
Marcela Uliano-Silva,
Kun Wang,
Xiaofeng Wei,
R. Wetzer,
Julia L. Wilson,
Xun Xu,
Huanming Yang,
A. Yoder,
Guojie Zhang
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7 |
2022 |
7
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3D genomics across the tree of life reveals condensin II as a determinant of architecture type
64 auth.
Claire Hoencamp,
O. Dudchenko,
Ahmed M. O. Elbatsh,
Sumitabha Brahmachari,
J. Raaijmakers,
Tom van Schaik,
Ángela Sedeño Cacciatore,
V. Contessoto,
Roy G van Heesbeen,
B. van den Broek,
Aditya N. Mhaskar,
Hans Teunissen,
Brian Glenn St Hilaire,
D. Weisz,
Arina D. Omer,
...
Melanie Pham,
Zane L. Colaric,
Zhen-Zhen Yang,
Suhas S. P. Rao,
Namita Mitra,
Christopher Lui,
Weijie Yao,
Ruqayya Khan,
L. Moroz,
A. Kohn,
J. St. Leger,
Alexandria Mena,
Karen Holcroft,
M. C. Gambetta,
Fabian Lim,
E. Farley,
N. Stein,
Alexander F. Haddad,
D. Chauss,
A. S. Mutlu,
Meng C. Wang,
N. Young,
Evin Hildebrandt,
Hans H. Cheng,
C. Knight,
T. L. Burnham,
K. Hovel,
Andrew J. Beel,
Pierre-Jean Mattei,
R. Kornberg,
W. Warren,
G. Cary,
J. Gómez-Skarmeta,
V. Hinman,
K. Lindblad-Toh,
F. Di Palma,
K. Maeshima,
A. Multani,
S. Pathak,
L. Nel‐Themaat,
R. Behringer,
P. Kaur,
R. Medema,
B. van Steensel,
Elzo de Wit,
J. Onuchic,
Michele Di Pierro,
Erez Lieberman Aiden,
B. Rowland
|
7 |
2021 |
7
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CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions
17 auth.
Anjali Kaushal,
Giriram Mohana,
Julien Dorier,
Isa Özdemir,
Arina D. Omer,
P. Cousin,
Anastasiia Semenova,
M. Taschner,
Oleksandr Dergai,
F. Marzetta,
...
C. Iseli,
Yossi Eliaz,
D. Weisz,
M. Shamim,
N. Guex,
Erez Lieberman Aiden,
M. C. Gambetta
|
6 |
2021 |
6
🐜
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Chromatin architecture transitions from zebrafish sperm through early embryogenesis
13 auth.
Candice L. Wike,
Yixuan Guo,
Mengyao Tan,
Ryohei Nakamura,
Dana K. Shaw,
Noelia Díaz,
Aneasha F Whittaker-Tademy,
Neva C. Durand,
Erez Lieberman Aiden,
Juan M. Vaquerizas,
...
D. Grunwald,
H. Takeda,
B. Cairns
|
5 |
2021 |
5
🐜
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CTCF looping is established during gastrulation in medaka embryos
15 auth.
Ryohei Nakamura,
Yuichi Motai,
M. Kumagai,
Candice L. Wike,
Haruyo Nishiyama,
Yoichiro Nakatani,
Neva C. Durand,
Kaori Kondo,
T. Kondo,
Tatsuya Tsukahara,
...
A. Shimada,
Brad R Cairns,
Erez Lieberman Aiden,
S. Morishita,
H. Takeda
|
5 |
2018 |
5
🐜
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|
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Robust CTCF-Based Chromatin Architecture Underpins Epigenetic Changes in the Heart Failure Stress–Gene Response
17 auth.
D. Lee,
W. Tan,
C. Anene-Nzelu,
Chang Jie Mick Lee,
Peter Y. Q. Li,
Tuan D. A. Luu,
C. Chan,
Z. Tiang,
S. Ng,
Xingfan Huang,
...
Motakis Efthymios,
M. Autio,
Jianming Jiang,
M. Fullwood,
Shyam Prabhakar,
Erez Lieberman Aiden,
R. Foo
|
5 |
2019 |
5
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|
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Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement
45 auth.
Vanika Garg,
O. Dudchenko,
Jinpeng Wang,
Aamir W. Khan,
Saurabh Gupta,
P. Kaur,
R. Saxena,
Sandip Kale,
Melanie Pham,
Jigao Yu,
A. Chitikineni,
Zhikang Zhang,
Guangyi Fan,
Christopher Lui,
V. Valluri,
...
Fanbo Meng,
Aditi Bhandari,
Xiaochuan Liu,
T. Yang,
Hua Chen,
B. Valliyodan,
Manish Roorkiwal,
Chengcheng Shi,
Hong Bin Yang,
Neva C. Durand,
M. Pandey,
Guowei Li,
Rutwik Barmukh,
Xingjun Wang,
Xiaoping Chen,
Hon Ming Lam,
Huifang Jiang,
X. Zong,
Xuanqiang Liang,
Xin Liu,
Boshou Liao,
B. Guo,
S. Jackson,
H. Nguyen,
W. Zhuang,
Wang Shubo,
Xiyin Wang,
Erez Lieberman Aiden,
J. Bennetzen,
R. Varshney
|
5 |
2021 |
5
🐜
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🐢
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Cohesin loss eliminates all loop domains, leading to links among superenhancers and downregulation of nearby genes
16 auth.
Suhas S. P. Rao,
Su-Chen Huang,
Brian Glenn St Hilair,
J. Engreitz,
Elizabeth M. Perez,
Kyong-Rim Kieffer-Kwon,
Adrian L. Sanborn,
Sarah E. Johnstone,
Ivan D. Bochkov,
Xingfan Huang,
...
M. Shamim,
Arina D. Omer,
B. Bernstein,
R. Casellas,
E. Lander,
Erez Lieberman Aiden
|
4 |
2017 |
4
🐢
|
|
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RedChIP identifies noncoding RNAs associated with genomic sites occupied by Polycomb and CTCF proteins
7 auth.
A. Gavrilov,
Rinat Sultanov,
Mikhail D. Magnitov,
Aleksandra Galitsyna,
E. Dashinimaev,
Erez Lieberman Aiden,
...
S. Razin
|
4 |
2021 |
4
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