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QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
120 auth. Evan Bolyen, J. Rideout, Matthew R. Dillon, N. Bokulich, C. Abnet, Gabriel A. Al-Ghalith, Harriet Alexander, Harriet Alexander, E. Alm, Manimozhiyan Arumugam, F. Asnicar, Yang Bai, J. Bisanz, K. Bittinger, A. Brejnrod, ... Colin J. Brislawn, C. T. Brown, B. Callahan, A. Caraballo-Rodríguez, John H. Chase, Emily K. Cope, R. R. Silva, P. Dorrestein, G. Douglas, D. Durall, C. Duvallet, C. Edwardson, Madeleine Ernst, M. Estaki, Jennifer T. Fouquier, J. Gauglitz, D. Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin M Hillmann, S. Holmes, H. Holste, C. Huttenhower, C. Huttenhower, G. Huttley, Stefan Janssen, A. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, K. Kang, K. Kang, Christopher R. Keefe, P. Keim, S. Kelley, D. Knights, I. Koester, I. Koester, T. Kosciólek, Jorden Kreps, M. Langille, Joslynn S. Lee, R. Ley, R. Ley, Yong-xin Liu, E. Loftfield, C. Lozupone, Massoud Maher, C. Marotz, Bryan D. Martin, Daniel McDonald, L. McIver, L. McIver, A. Melnik, J. Metcalf, S. C. Morgan, James T. Morton, Ahmad Turan Naimey, Jose A Navas-Molina, Jose A Navas-Molina, Louis-Félix Nothias, Stephanie B. Orchanian, Talima R. Pearson, Samuel L. Peoples, Samuel L. Peoples, D. Petráš, M. Preuss, E. Pruesse, Lasse Buur Rasmussen, A. Rivers, Ii Michael S Robeson, P. Rosenthal, N. Segata, Michael Shaffer, A. Shiffer, R. Sinha, Se Jin Song, J. Spear, Austin D. Swafford, Luke R. Thompson, Luke R. Thompson, P. Torres, Pauline Trinh, A. Tripathi, A. Tripathi, P. Turnbaugh, Sabah Ul-Hasan, J. J. Hooft, Fernando Vargas, Y. Vázquez-Baeza, E. Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C. Weber, Kyle C. Weber, Chase Williamson, A. Willis, Z. Xu, Jesse R. Zaneveld, Yilong Zhang, R. Knight, J. Caporaso
We present QIIME 2, an open-source microbiome data science platform accessible to users spanning the microbiome research ecosystem, from scientists and engineers to clinicians and policy makers. QIIME 2 provides new features that will drive the next…
We present QIIME 2, an open-source microbiome data science platform accessible to users spanning the microbiome research ecosystem, from scientists and engineers to clinicians and policy makers. QIIME 2 provides new features that will drive the next generation of microbiome research. These include interactive spatial and temporal analysis and visualization tools, support for metabolomics and shotgun metagenomics analysis, and automated data provenance tracking to ensure reproducible, transparent microbiome data science.
65
 10 2018