Antje Hirsekorn's Profile

Role	Title	Level	Year	L/R
🐜	Detecting actively translated open reading frames in ribosome profiling data 9 auth. Lorenzo Calviello, N. Mukherjee, E. Wyler, Henrik Zauber, Antje Hirsekorn, M. Selbach, ... M. Landthaler, B. Obermayer, U. Ohler	8	2015	8 🐜
🐜	Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes 26 auth. Chloé Chong, Markus Müller, HuiSong Pak, Dermot Harnett, Florian Huber, Delphine Grun, M. Leleu, Aymeric Auger, M. Arnaud, Brian J. Stevenson, Justine Michaux, Ilija Bilić, Antje Hirsekorn, Lorenzo Calviello, L. Simó-Riudalbas, ... E. Planet, J. Lubiński, M. Bryśkiewicz, M. Wiznerowicz, I. Xenarios, Lin Zhang, D. Trono, A. Harari, U. Ohler, G. Coukos, M. Bassani-Sternberg	7	2019	7 🐜
🐬	Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee, Lorenzo Calviello, Antje Hirsekorn, Stefano de Pretis, Mattia Pelizzola, U. Ohler	7	2016	7 🐬
🐜	A Multi-step Transcriptional and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells. 12 auth. Silvia Velasco, Mahmoud M. Ibrahim, Akshay Kakumanu, Görkem Garipler, Begüm Aydin, M. Al-Sayegh, ... Antje Hirsekorn, Farah Abdul-Rahman, R. Satija, U. Ohler, Shaun Mahony, E. Mazzoni	6	2017	6 🐜
🐜	FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells 14 auth. Ena Kolundzic, A. Ofenbauer, Selman Bulut, B. Uyar, Gülkiz Baytek, Anne Sommermeier, Stefanie Seelk, Mei He, Antje Hirsekorn, Dubravka Vučićević, ... A. Akalin, S. Diecke, S. Lacadie, B. Tursun	6	2018	6 🐜
🐬	Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling Aslihan Karabacak Calviello, Antje Hirsekorn, R. Wurmus, Dilmurat Yusuf, U. Ohler	6	2018	6 🐬
🐬	Quantification of translation uncovers the functions of the alternative transcriptome Lorenzo Calviello, Antje Hirsekorn, U. Ohler	5	2019	5 🐬
🐜	Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus 7 auth. Praveen Baskaran, C. Rödelsperger, Neel Prabh, Vahan Serobyan, Gabriel V. Markov, Antje Hirsekorn, ... C. Dieterich	5	2015	5 🐜
🐜	Determinants of promoter and enhancer transcription directionality in metazoans 10 auth. Mahmoud M. Ibrahim, Aslihan Karabacak, Alexander Glahs, Ena Kolundzic, Antje Hirsekorn, Alexa Carda, ... B. Tursun, Robert P. Zinzen, S. Lacadie, U. Ohler	4	2018	4 🐜
🐜	Global identification of functional microRNA-mRNA interactions in Drosophila 7 auth. H. Wessels, S. Lebedeva, Antje Hirsekorn, R. Wurmus, A. Akalin, N. Mukherjee, ... U. Ohler	4	2019	4 🐜