BetterScholar BetterScholar
11
Role
Title
Level Year L/R
🐜 Comprehensive and Integrative Genomic Characterization of Hepatocellular Carcinoma
236 auth. Adrian Ally, M. Balasundaram, R. Carlsen, E. Chuah, A. Clarke, Noreen Dhalla, R. Holt, Steven J. M. Jones, Darlene Lee, Yussanne Ma, M. Marra, Michael Mayo, Richard A. Moore, A. Mungall, J. Schein, ... Payal Sipahimalani, Angela Tam, N. Thiessen, Dorothy Cheung, Tina Wong, Denise Brooks, A. G. Robertson, R. Bowlby, K. Mungall, S. Sadeghi, Liu Xi, K. Covington, E. Shinbrot, D. Wheeler, R. Gibbs, L. Donehower, Linghua Wang, Jay Bowen, J. Gastier-Foster, M. Gerken, Carmen Helsel, K. Leraas, T. Lichtenberg, N. Ramirez, L. Wise, E. Zmuda, S. Gabriel, M. Meyerson, C. Cibulskis, Bradley A. Murray, J. Shih, R. Beroukhim, A. Cherniack, S. Schumacher, G. Saksena, C. Pedamallu, L. Chin, G. Getz, M. Noble, Hailei Zhang, David I Heiman, Juok Cho, Nils Gehlenborg, Douglas Voet, Pei Lin, S. Frazer, T. DeFreitas, S. Meier, M. Lawrence, Jaegil Kim, C. Creighton, D. Muzny, H. Doddapaneni, Jianhong Hu, Min Wang, Donna Morton, V. Korchina, Yi Han, H. Dinh, L. Lewis, Michelle Bellair, Xiuping Liu, J. Santibanez, R. Glenn, Sandy Lee, Walker Hale, J. Parker, M. Wilkerson, D. Hayes, Sheila M. Reynolds, I. Shmulevich, Wei Zhang, Yuexin Liu, L. Iype, H. Makhlouf, M. Torbenson, S. Kakar, M. Yeh, D. Jain, D. Kleiner, R. Dhanasekaran, H. El‐Serag, S. Yim, J. Weinstein, L. Mishra, Jianping Zhang, Rehan Akbani, Shiyun Ling, Z. Ju, X. Su, A. Hegde, G. Mills, Yiling Lu, J. Chen, Ju-Seog Lee, B. Sohn, Jae-Jun Shim, P. Tong, H. Aburatani, Shogo Yamamoto, K. Tatsuno, Wei Li, Zheng Xia, Nicolas Stransky, E. Seiser, F. Innocenti, Jianjiong Gao, Ritika Kundra, Hongxin Zhang, Zachary J. Heins, Angelica Ochoa, C. Sander, M. Ladanyi, R. Shen, Arshi Arora, F. SΓ‘nchez-Vega, N. Schultz, K. Kasaian, Amie Radenbaugh, K. Bissig, D. Moore, Y. Totoki, Hiromi Nakamura, T. Shibata, C. Yau, Kiley Graim, Josh M Stuart, D. Haussler, B. Slagle, A. Ojesina, Panagiotis Katsonis, Amanda M Koire, O. Lichtarge, Teng-Kuei Hsu, M. Ferguson, John A. Demchok, Ina Felau, Margi Sheth, R. Tarnuzzer, Zhining Wang, Liming Yang, J. Zenklusen, J. Zhang, C. Hutter, H. Sofia, R. Verhaak, Siyuan Zheng, F. Lang, Sudha Chudamani, Jia Liu, Laxmi Lolla, Ye Wu, R. Naresh, T. Pihl, Charlie Sun, Yunhu Wan, C. Benz, Amy H. Perou, L. Thorne, L. Boice, Meijuan Huang, W. Rathmell, H. Noushmehr, F. Saggioro, D. Tirapelli, C. G. C. JΓΊnior, Ê. D. Mente, O. C. Silva, F. Trevisan, K. Kang, K. Ahn, N. Giama, C. Moser, T. Giordano, Michelle Vinco, T. Welling, D. Crain, Erin E. Curley, J. Gardner, D. Mallery, S. Morris, J. Paulauskis, R. Penny, C. Shelton, T. Shelton, R. Kelley, Joong-Won Park, V. Chandan, L. Roberts, O. Bathe, C. Hagedorn, J. Auman, D. O'Brien, J. Kocher, Corbin D. Jones, P. Mieczkowski, C. Perou, Tara J. Skelly, Donghui Tan, Umadevi Veluvolu, S. Balu, T. Bodenheimer, A. Hoyle, S. Jefferys, S. Meng, Lisle E. Mose, Yan Shi, J. Simons, Matthew G. Soloway, J. Roach, K. Hoadley, S. Baylin, Hui Shen, T. Hinoue, Moiz Bootwalla, D. V. Berg, D. Weisenberger, Phillip H. Lai, Andrea E Holbrook, Mario Berrios, P. Laird
10 2017
10
🐜
🐜 Pathogenic Germline Variants in 10,389 Adult Cancers.
763 auth. Kuan-lin Huang, R. J. Mashl, Yige Wu, D. Ritter, Jiayin Wang, C. Oh, M. Paczkowska, Sheila M. Reynolds, Matthew A. Wyczalkowski, Ninad Oak, Adam D. Scott, M. Krassowski, A. Cherniack, Kathleen E. Houlahan, R. Jayasinghe, ... Liang-Bo Wang, D. Zhou, Ding-wei Liu, Song Cao, Young Won Kim, Amanda M Koire, Joshua F. McMichael, V. Hucthagowder, Taebeom Kim, A. Hahn, Chen Wang, M. McLellan, F. Al-Mulla, Kimberly J. Johnson, O. Lichtarge, P. Boutros, Benjamin J. Raphael, A. Lazar, Wei Zhang, M. Wendl, R. Govindan, Sanjay Jain, D. Wheeler, S. Kulkarni, J. Dipersio, J. Reimand, F. Meric-Bernstam, Ken Chen, I. Shmulevich, S. Plon, F. Chen, L. Ding, Samantha J. Caesar-Johnson, John A. Demchok, Ina Felau, M. Kasapi, M. Ferguson, C. Hutter, H. Sofia, R. Tarnuzzer, Zhining Wang, Liming Yang, J. Zenklusen, J. Zhang, Sudha Chudamani, Jia Liu, Laxmi Lolla, R. Naresh, T. Pihl, Qiang Sun, Yunhu Wan, Ye Wu, Juok Cho, T. DeFreitas, S. Frazer, Nils Gehlenborg, G. Getz, David I Heiman, Jaegil Kim, M. Lawrence, Pei Lin, S. Meier, M. Noble, G. Saksena, Douglas Voet, Hailei Zhang, Brady Bernard, N. Chambwe, Varsha Dhankani, T. Knijnenburg, R. Kramer, Kalle Leinonen, Yuexin Liu, Michael Miller, V. Thorsson, Rehan Akbani, B. Broom, A. Hegde, Z. Ju, R. Kanchi, Anil Korkut, Jun Li, Han Liang, Shiyun Ling, Wenbin Liu, Yiling Lu, G. Mills, Kwok-Shing Ng, A. Rao, Michael J. Ryan, Jing Wang, J. Weinstein, Jiexin Zhang, Adam Abeshouse, J. Armenia, D. Chakravarty, W. Chatila, I. Bruijn, Jianjiong Gao, Benjamin E. Gross, Zachary J. Heins, Ritika Kundra, Konnor C. La, M. Ladanyi, Augustin Luna, Moriah G. Nissan, Angelica Ochoa, Sarah M. Phillips, E. Reznik, F. SΓ‘nchez-Vega, C. Sander, N. Schultz, R. Sheridan, S. O. Sumer, Yichao Sun, B. Taylor, Jioajiao Wang, Hongxin Zhang, Pavana Anur, Myron Peto, P. Spellman, C. Benz, Joshua M. Stuart, Christopher K. Wong, C. Yau, D. Hayes, J. Parker, M. Wilkerson, Adrian Ally, M. Balasundaram, R. Bowlby, Denise Brooks, R. Carlsen, E. Chuah, Noreen Dhalla, Robert W. Holt, Steven J. M. Jones, K. Kasaian, Darlene Lee, Yussanne Ma, M. Marra, Michael Mayo, Richard A. Moore, A. Mungall, K. Mungall, A. G. Robertson, S. Sadeghi, J. Schein, Payal Sipahimalani, Angela Tam, N. Thiessen, Kane Tse, Tina Wong, Ashton C. Berger, R. Beroukhim, C. Cibulskis, S. Gabriel, G. Gao, G. Ha, M. Meyerson, S. Schumacher, J. Shih, M. Kucherlapati, R. Kucherlapati, Stephen Baylin, L. Cope, Ludmila V. Danilova, Moiz Bootwalla, Phillip H. Lai, D. Maglinte, D. V. Berg, D. Weisenberger, J. Auman, S. Balu, T. Bodenheimer, C. Fan, K. Hoadley, A. Hoyle, S. Jefferys, Corbin D. Jones, S. Meng, P. Mieczkowski, Lisle E. Mose, Amy H. Perou, C. Perou, J. Roach, Yan Shi, J. Simons, Tara J. Skelly, Matthew G. Soloway, Donghui Tan, Umadevi Veluvolu, Huihui Fan, T. Hinoue, P. Laird, Hui Shen, Wanding Zhou, Michelle Bellair, K. Chang, K. Covington, C. Creighton, H. Dinh, H. Doddapaneni, L. Donehower, J. Drummond, R. Gibbs, R. Glenn, Walker Hale, Yi Han, Jianhong Hu, V. Korchina, Sandy Lee, L. Lewis, Wei Li, Xiuping Liu, M. Morgan, Donna Morton, D. Muzny, J. Santibanez, Margi Sheth, E. Shinbrot, Linghua Wang, Min Wang, D. Wheeler, Liu Xi, Fengmei Zhao, J. Hess, Elizabeth L. Appelbaum, Matthew H. Bailey, M. Cordes, C. Fronick, L. Fulton, R. Fulton, C. Kandoth, E. Mardis, Christopher A. Miller, Heather K. Schmidt, R. Wilson, D. Crain, Erin E. Curley, J. Gardner, Kevin R Lau, D. Mallery, S. Morris, J. Paulauskis, R. Penny, C. Shelton, T. Shelton, M. Sherman, E. Thompson, P. Yena, Jay Bowen, J. Gastier-Foster, M. Gerken, K. Leraas, T. Lichtenberg, N. Ramirez, L. Wise, E. Zmuda, N. Corcoran, T. Costello, C. Hovens, A. Carvalho, A. D. Carvalho, JosΓ© H. Fregnani, A. Longatto-Filho, R. Reis, C. Scapulatempo-Neto, H. C. Silveira, D. O. Vidal, Andrew Burnette, J. Eschbacher, B. Hermes, Ardene Noss, Rosy Singh, Matthew L. Anderson, Patricia D. Castro, M. Ittmann, D. Huntsman, B. Kohl, X. Le, Richard A. Thorp, C. Andry, Elizabeth R. Duffy, V. Lyadov, O. Paklina, G. Setdikova, A. Shabunin, M. Tavobilov, C. McPherson, R. Warnick, R. Berkowitz, Daniel Cramer, C. Feltmate, N. Horowitz, A. Kibel, M. Muto, C. Raut, A. Malykh, J. Barnholtz-Sloan, Wendi Barrett, K. Devine, J. Fulop, Q. Ostrom, K. Shimmel, Yingli Wolinsky, A. Sloan, A. D. Rose, F. Giuliante, M. Goodman, B. Karlan, C. Hagedorn, J. Eckman, Jodi Harr, J. Myers, Kelinda Tucker, L. A. Zach, B. Deyarmin, Hai Hu, L. Kvecher, C. Larson, R. Mural, S. Somiari, A. VΓ­cha, T. Zelinka, Joseph Bennett, M. Iacocca, B. Rabeno, P. Swanson, M. Latour, L. Lacombe, B. TΓͺtu, A. Bergeron, Mary McGraw, S. Staugaitis, J. Chabot, H. Hibshoosh, Antonia R. Sepulveda, Tao Su, Timothy C. Wang, O. Potapova, Olga Voronina, L. Desjardins, O. Mariani, S. Roman-Roman, X. Sastre, M. Stern, F. Cheng, S. Signoretti, A. Berchuck, D. Bigner, E. Lipp, J. Marks, S. McCall, R. McLendon, A. Secord, A. Sharp, M. Behera, D. Brat, Amy Y. Chen, K. Delman, S. Force, F. Khuri, K. Magliocca, S. Maithel, J. Olson, T. Owonikoko, A. Pickens, S. Ramalingam, Dong-Myung Shin, G. Sica, Erwin G. Van Meir, Hongzhen Zhang, Wil Eijckenboom, A. Gillis, E. Korpershoek, L. Looijenga, W. Oosterhuis, H. Stoop, K. V. Kessel, E. Zwarthoff, C. Calatozzolo, L. Cuppini, S. Cuzzubbo, F. DiMeco, G. Finocchiaro, L. Mattei, A. Perin, B. Pollo, Chu Chen, J. Houck, Pawadee Lohavanichbutr, A. Hartmann, C. Stoehr, R. Stoehr, H. Taubert, S. Wach, B. Wullich, W. Kycler, D. Murawa, M. Wiznerowicz, K. Chung, W. Edenfield, Julie M Martin, E. Baudin, G. Bubley, R. Bueno, A. Rienzo, W. Richards, S. Kalkanis, T. Mikkelsen, H. Noushmehr, L. Scarpace, N. Girard, M. Aymerich, E. Campo, E. GinΓ©, A. Guillermo, N. V. Bang, Phan Thi Hong Hanh, Bui Duc Phu, Yufang Tang, H. Colman, K. Evason, P. Dottino, J. Martignetti, H. Gabra, H. Juhl, Teniola Akeredolu, Serghei Stepa, D. Hoon, K. Ahn, K. Kang, F. Beuschlein, A. Breggia, M. Birrer, D. Bell, M. Borad, A. Bryce, Erik Castle, V. Chandan, J. Cheville, J. Copland, M. Farnell, T. Flotte, N. Giama, T. Ho, Michael J. Kendrick, J. Kocher, Karla J. Kopp, C. Moser, D. Nagorney, D. O'Brien, B. O'neill, T. Patel, G. Petersen, F. Que, M. Rivera, L. Roberts, R. Smallridge, T. Smyrk, M. Stanton, R. Thompson, M. Torbenson, J. D. Yang, Lizhi Zhang, F. Brimo, J. Ajani, Ana Maria Angulo Gonzalez, C. Behrens, J. Bondaruk, R. Broaddus, B. Czerniak, B. Esmaeli, J. Fujimoto, J. Gershenwald, C. Guo, C. Logothetis, C. Moran, L. Ramondetta, D. Rice, A. Sood, P. Tamboli, T. Thompson, P. Troncoso, A. Tsao, I. Wistuba, Candace D. Carter, L. Haydu, P. Hersey, V. Jakrot, H. Kakavand, R. Kefford, Kenneth Lee, G. Long, G. Mann, M. Quinn, R. Saw, R. Scolyer, K. Shannon, A. Spillane, Jonathan Stretch, M. Synott, J. Thompson, J. Wilmott, H. Al-Ahmadie, T. Chan, R. Ghossein, A. Gopalan, D. Levine, V. Reuter, S. Singer, Bhuvanesh Singh, N. V. Tien, Thomas B. Broudy, Cyrus Mirsaidi, Praveen Nair, Paul Drwiega, Judy Miller, Jennifer L. Smith, H. Zaren, Joong-Won Park, N. P. Hung, E. Kebebew, W. Linehan, A. Metwalli, K. Pacak, P. Pinto, M. Schiffman, L. Schmidt, C. Vocke, N. Wentzensen, R. Worrell, Hannah P. Yang, M. Moncrieff, C. Goparaju, J. Melamed, H. Pass, N. Botnariuc, I. Caraman, M. Cernat, I. Chemencedji, A. Clipca, Serghei Doruc, Ghenadie Gorincioi, Sergiu Mura, Maria Pirtac, Irina Stancul, Diana Tcaciuc, Monique Albert, I. Alexopoulou, A. Arnaout, John M. S. Bartlett, J. Engel, S. Gilbert, J. Parfitt, H. Sekhon, G. Thomas, D. Rassl, R. Rintoul, C. Bifulco, Raina A Tamakawa, W. Urba, N. Hayward, H. Timmers, A. Antenucci, F. Facciolo, G. Grazi, M. Marino, R. Merola, R. Krijger, A. Gimenez-Roqueplo, A. PichΓ©, S. Chevalier, G. Mckercher, KΔ±vanΓ§ Birsoy, G. Barnett, C. Brewer, C. Farver, Theresa Naska, N. Pennell, D. Raymond, C. Schilero, Kathy Smolenski, Felicia Williams, C. Morrison, J. Borgia, M. Liptay, M. Pool, C. Seder, K. Junker, L. Omberg, Mikhail Dinkin, G. Manikhas, D. Alvaro, M. Bragazzi, V. Cardinale, G. Carpino, E. Gaudio, David W. Chesla, S. Cottingham, M. Dubina, F. Moiseenko, R. Dhanasekaran, K. Becker, K. Janssen, J. Slotta-Huspenina, M. Abdel-Rahman, Dina Aziz, Sue Bell, C. Cebulla, Amy Davis, R. Duell, J. Elder, J. Hilty, Bahavna Kumar, James Lang, N. Lehman, Randy Mandt, P. Nguyen, R. Pilarski, Karan J. Rai, L. Schoenfield, Kelly Senecal, P. Wakely, P. Hansen, R. Lechan, James Powers, A. Tischler, W. Grizzle, Katherine C. Sexton, A. Kastl, J. Henderson, S. Porten, J. Waldmann, M. Fassnacht, S. Asa, D. Schadendorf, M. Couce, M. Graefen, H. Huland, G. Sauter, T. Schlomm, R. Simon, P. Tennstedt, O. Olabode, Mark Nelson, O. Bathe, P. Carroll, J. Chan, P. Disaia, Pat Glenn, R. Kelley, C. Landen, J. Phillips, M. Prados, J. Simko, K. Smith-McCune, Scott VandenBerg, K. Roggin, Ashley Fehrenbach, A. Kendler, Suzanne Sifri, Ruth Steele, A. Jimeno, Francis A. Carey, I. Forgie, M. Mannelli, M. Carney, Brenda Hernandez, B. Campos, C. Herold‐Mende, C. Jungk, A. Unterberg, A. Deimling, A. Bossler, Joseph A. Galbraith, Laura S. Jacobus, M. Knudson, T. Knutson, Deqin Ma, M. Milhem, R. Sigmund, A. Godwin, R. Madan, H. Rosenthal, C. Adebamowo, S. Adebamowo, A. Boussioutas, D. Beer, T. Giordano, A. Mes-Masson, F. Saad, Therese Bocklage, L. Landrum, R. Mannel, K. Moore, K. Moxley, R. Postier, Joan L. Walker, R. Zuna, M. Feldman, Federico Valdivieso, R. Dhir, J. Luketich, Edna M. Mora Pinero, Mario E. Quintero-AguilΓ³, C. Carlotti, J. S. Santos, R. Kemp, A. Sankarankuty, D. Tirapelli, J. Catto, K. Agnew, E. Swisher, J. Creaney, B. Robinson, C. Shelley, Eryn M. Godwin, S. Kendall, Cassaundra Shipman, C. Bradford, T. Carey, Andrea Haddad, Jeff Moyer, Lisa A. Peterson, M. Prince, L. Rozek, Gregory T Wolf, R. Bowman, K. Fong, I. Yang, R. Korst, W. Rathmell, J. Fantacone-Campbell, J. Hooke, A. Kovatich, C. Shriver, J. Dipersio, B. Drake, S. Heath, T. Ley, B. V. Tine, P. Westervelt, M. Rubin, J. I. Lee, N. D. Aredes, A. Mariamidze
9 2018
9
🐜
🐜 Single nucleotide variations: Biological impact and theoretical interpretation
7 auth. Panagiotis Katsonis, Amanda M Koire, Stephen J. Wilson, Teng-Kuei Hsu, R. Lua, Angela D. Wilkins, ... O. Lichtarge
6 2014
6
🐜
🐜 A Mild PUM1 Mutation Is Associated with Adult-Onset Ataxia, whereas Haploinsufficiency Causes Developmental Delay and Seizures
41 auth. V. Gennarino, E. Palmer, Laura M McDonell, Li Wang, Carolyn J. Adamski, Amanda M Koire, Lauren See, Chun-An Chen, C. Schaaf, J. Rosenfeld, J. Panzer, U. Moog, Shuang Hao, A. Bye, E. Kirk, ... P. Stankiewicz, Amy M. Breman, A. McBride, T. Kandula, Holly A. Dubbs, R. Macintosh, M. Cardamone, Ying Zhu, Kevin Ying, Kerith-Rae Dias, M. Cho, Lindsay B. Henderson, B. Baskin, Paula Morris, Jiang Tao, M. Cowley, M. Dinger, T. Roscioli, O. Caluseriu, O. Suchowersky, R. Sachdev, O. Lichtarge, Jianrong Tang, K. Boycott, J. Holder, H. Zoghbi
6 2018
6
🐜
🐜 Comprehensive Genomic Characterization of Parathyroid Cancer Identifies Novel Candidate Driver Mutations and Core Pathways
15 auth. C. Clarke, Panagiotis Katsonis, Teng-Kuei Hsu, Amanda M Koire, Angelica M. Silva-Figueroa, I. Christakis, Michelle D. Williams, Merve Kutahyalioglu, L. Kwatampora, Y. Xi, ... Jeffrey E. Lee, E Scott Koptez, N. Busaidy, N. Perrier, O. Lichtarge
5 2018
5
🐜
🐬 Predicting phenotype from genotype: Improving accuracy through more robust experimental and computational modeling
Jonathan Gallion, Amanda M Koire, Panagiotis Katsonis, Anne‐Marie Schoenegge, M. Bouvier, O. Lichtarge
4 2017
4
🐬
🦁 Repurposing Germline Exomes of the Cancer Genome Atlas Demands a Cautious Approach and Sample-Specific Variant Filtering
Amanda M Koire, Panagiotis Katsonis, O. Lichtarge
3 2016
3
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🐜 Harnessing the paradoxical phenotypes of APOE Ι›2 and APOE Ι›4 to identify genetic modifiers in Alzheimer's disease
9 auth. Young Won Kim, I. Al-Ramahi, Amanda M Koire, Stephen J. Wilson, Daniel M. Konecki, Samantha Mota, ... Shirin Soleimani, J. Botas, O. Lichtarge
3 2020
3
🐜
🐜 A general calculus of fitness landscapes finds genes under selection in cancers
16 auth. Teng-Kuei Hsu, Jennifer Asmussen, Amanda M Koire, Byung-Kwon Choi, M. Gadhikar, E. Huh, Chih-Hsu Lin, Daniel M. Konecki, Young Won Kim, C. Pickering, ... M. Kimmel, L. Donehower, M. Frederick, J. Myers, Panagiotis Katsonis, O. Lichtarge
3 2022
3
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🐜 Automated literature mining and hypothesis generation through a network of Medical Subject Headings
14 auth. Stephen J. Wilson, Angela D. Wilkins, Matthew V. Holt, Byung-Kwon Choi, Daniel M. Konecki, Chih-Hsu Lin, Amanda M Koire, Yue Chen, Seon-Young Kim, Yi Wang, ... Brigitta Wastuwidyaningtyas, J. Qin, L. Donehower, O. Lichtarge
3 2018
3
🐜
🦁 Codon-level co-occurrences of germline variants and somatic mutations in cancer are rare but often lead to incorrect variant annotation and underestimated impact prediction
Amanda M Koire, Young Won Kim, Jarey H. Wang, Panagiotis Katsonis, Haijing Jin, O. Lichtarge
1 2017
1
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