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Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors
François Serra,
Davide Baù,
Mike Goodstadt,
David Castillo,
Guillaume J. Filion,
M. Martí-Renom
|
7 |
2017 |
7
🐬
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|
🐜
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4D Genome Rewiring during Oncogene-Induced and Replicative Senescence
21 auth.
S. Sati,
B. Bonev,
Quentin Szabo,
D. Jost,
P. Bensadoun,
François Serra,
V. Loubiere,
G. Papadopoulos,
J. Rivera-Mulia,
L. Fritsch,
...
Pauline Bouret,
David Castillo,
J. Gelpi,
M. Orozco,
C. Vaillant,
F. Pellestor,
F. Bantignies,
M. Martí-Renom,
D. Gilbert,
J. Lemaître,
Giacomo Cavalli
|
6 |
2020 |
6
🐜
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|
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3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing.
15 auth.
Huy Q. Nguyen,
Shyamtanu Chattoraj,
David Castillo,
S. Nguyen,
G. Nir,
A. Lioutas,
Elliot A. Hershberg,
Nuno M. C. Martins,
Paul L. Reginato,
M. Hannan,
...
Brian J. Beliveau,
G. Church,
Evan R. Daugharthy,
M. Martí-Renom,
C.-ting Wu
|
6 |
2020 |
6
🐜
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|
🐜
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Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs
7 auth.
M. Di Stefano,
R. Stadhouders,
Irene Farabella,
David Castillo,
François Serra,
T. Graf,
...
M. Martí-Renom
|
5 |
2020 |
5
🐜
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Binless normalization of Hi-C data provides significant interaction and difference detection independent of resolution
Yannick G. Spill,
David Castillo,
Enrique Vidal,
M. Martí-Renom
|
3 |
2019 |
3
🐬
|
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🐜
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The anti-immune dengue subgenomic flaviviral RNA is present in vesicles in mosquito saliva and is associated with increased infectivity
21 auth.
Shih-Chia Yeh,
Tania Strilets,
Wei-Lian Tan,
David Castillo,
H. Medkour,
Félix Rey-Cadilhac,
Idalba M Serrato-Pomar,
Florian Rachenne,
Avisha Chowdhury,
Vanessa Chuo,
...
Sasha R. Azar,
Moirangthem Kiran Singh,
R. Hamel,
D. Missé,
R. Kini,
L. Kenney,
N. Vasilakis,
M. Martí-Renom,
Guy Nir,
J. Pompon,
M. Garcia-Blanco
|
3 |
2023 |
3
🐜
|
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Deconwolf enables high-performance deconvolution of widefield fluorescence microscopy images
15 auth.
Erik L. G. Wernersson,
Eleni Gelali,
Gabriele Girelli,
Su Wang,
David Castillo,
C. Langseth,
Huy Q Nguyen,
Shyamtanu Chattoraj,
Anna Martinez Casals,
E. Lundberg,
...
M. Nilsson,
M. Martí-Renom,
Chao-ting Wu,
N. Crosetto,
M. Bienko
|
2 |
2022 |
2
🐜
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MuGVRE. A virtual research environment for 3D/4D genomics
28 auth.
L. Codó,
Genís Bayarri,
J. '. Cid-Fuentes,
Javier Conejero,
R. Royo,
Dmitry Repchevsky,
M. Pasi,
A. Meletiou,
Mark D. McDowall,
Fatima Reham,
José A. Alcántara,
Brian Jiménez‐García,
Jürgen Walther,
Ricard Illa,
François Serra,
...
Mike Goodstadt,
David Castillo,
S. Sati,
Diana Buitrago,
I. Brun-Heath,
J. Fernández-Recio,
Giacomo Cavalli,
M. Martí-Renom,
Andrew D. Yates,
C. Laughton,
Rosa M. Badia,
M. Orozco,
J. Gelpi
|
2 |
2019 |
2
🐜
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3D reconstruction of genomic regions from sparse interaction data
Julen Mendieta-Esteban,
M. Di Stefano,
David Castillo,
Irene Farabella,
M. Martí-Renom
|
2 |
2020 |
2
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